Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14829 Davidia involucrata HOM05D001171 ORTHO05D006126 0.0e+00 1157.9 581 100.0
Dinv10966 Davidia involucrata HOM05D001171 ORTHO05D006126 3.0e-278 961.4 642 77.4
Actinidia20704 Actinidia chinensis HOM05D001171 ORTHO05D006126 1.4e-251 872.8 642 69.3
CSS0006395 Camellia sinensis var. sinensis HOM05D001171 ORTHO05D006126 1.6e-250 869.4 645 68.4
Actinidia09656 Actinidia chinensis HOM05D001171 ORTHO05D006126 7.3e-248 860.5 642 68.5
TAR622G0378 Trochodendron aralioides HOM05D001171 ORTHO05D006126 4.1e-243 844.7 642 66.0
Cfa009328 Carpinus fangiana HOM05D001171 ORTHO05D006126 2.8e-239 832.0 642 66.2
RcHm_v2.0_Chr4g0430551 Rosa chinensis HOM05D001171 ORTHO05D006126 1.4e-238 829.7 642 64.6
Potri.008G175400 Populus trichocarpa HOM05D001171 ORTHO05D006126 2.0e-237 825.9 642 66.0
Hma1.2p1_0065F.1_g035610 Hydrangea macrophylla HOM05D001171 ORTHO05D006126 5.8e-237 824.3 644 66.3
Prupe.1G227300 Prunus persica HOM05D001171 ORTHO05D006126 1.3e-236 823.2 642 64.3
Manes.12G012600 Manihot esculenta HOM05D001171 ORTHO05D006126 4.9e-236 821.2 642 64.8
Nn3g16495 Nelumbo nucifera HOM05D001171 ORTHO05D006126 9.2e-235 817.0 642 65.1
Cc00_g13520 Coffea canephora HOM05D001171 ORTHO05D006126 2.3e-233 812.4 643 64.5
CiPaw.05G111400 Carya illinoinensis HOM05D001171 ORTHO05D006126 7.3e-232 807.4 642 65.6
TWI36G0373 Tripterygium wilfordii HOM05D001171 ORTHO05D006126 3.6e-231 805.1 642 62.6
Ciclev10030679m.g Citrus clementina HOM05D001171 ORTHO05D006126 6.2e-231 804.3 642 63.7
Sabra08G0133800 Salix brachista HOM05D001171 ORTHO05D006126 8.1e-231 803.9 654 64.2
CiPaw.06G101600 Carya illinoinensis HOM05D001171 ORTHO05D006126 1.5e-229 799.7 642 63.4
MD13G1117700 Malus domestica HOM05D001171 ORTHO05D006126 1.5e-229 799.7 642 62.9
Rhsim12G0099100 Rhododendron simsii HOM05D001171 ORTHO05D006126 2.6e-229 798.9 642 64.2
FvH4_4g23910 Fragaria vesca HOM05D001171 ORTHO05D006126 5.8e-229 797.7 642 62.1
MD16G1117900 Malus domestica HOM05D001171 ORTHO05D006126 9.3e-227 790.4 642 63.2
Duzib248G1370 Durio zibethinus HOM05D001171 ORTHO05D006126 2.7e-226 788.9 642 64.0
QL03p053673 Quercus lobata HOM05D001171 ORTHO05D006126 6.0e-226 787.7 641 62.4
FAN07G0777 Fragaria x ananassa HOM05D001171 ORTHO05D006126 1.0e-225 786.9 640 62.2
Lj6A825T69 Lonicera japonica HOM05D001171 ORTHO05D006126 1.0e-225 786.9 667 61.9
Peaxi162Scf00518g00435 Petunia axillaris HOM05D001171 ORTHO05D006126 1.7e-225 786.2 643 62.1
Gorai.009G332800 Gossypium raimondii HOM05D001171 ORTHO05D006126 8.7e-225 783.9 642 63.6
Thecc.02G210400 Theobroma cacao HOM05D001171 ORTHO05D006126 2.5e-224 782.3 641 63.5
GSVIVG01010452001 Vitis vinifera HOM05D001171 ORTHO05D006126 2.5e-224 782.3 643 63.1
COL.COLO4_20384 Corchorus olitorius HOM05D001171 ORTHO05D006126 1.6e-223 779.6 642 62.1
FAN17G1139 Fragaria x ananassa HOM05D001171 ORTHO05D006126 1.6e-223 779.6 658 60.3
Aqoxy5G03404 Aquilegia oxysepala HOM05D001171 ORTHO05D006126 4.8e-223 778.1 642 61.7
Gohir.D05G311700 Gossypium hirsutum HOM05D001171 ORTHO05D006126 4.8e-223 778.1 642 63.4
Gohir.A05G310900 Gossypium hirsutum HOM05D001171 ORTHO05D006126 6.2e-223 777.7 642 62.9
CAN.G828.1 Capsicum annuum HOM05D001171 ORTHO05D006126 8.1e-223 777.3 642 62.3
Migut.E00023 Erythranthe guttata HOM05D001171 ORTHO05D006126 1.8e-222 776.2 642 62.6
Solyc12g035500.3 Solanum lycopersicum HOM05D001171 ORTHO05D006126 5.3e-222 774.6 648 62.2
Sopen12g015420 Solanum pennellii HOM05D001171 ORTHO05D006126 9.0e-222 773.9 642 62.1
Lj4g0002448 Lotus japonicus HOM05D001171 ORTHO05D006126 3.4e-221 771.9 638 61.1
arahy.Tifrunner.gnm1.ann1.2F0YN9 Arachis hypogaea HOM05D001171 ORTHO05D006126 7.6e-221 770.8 638 60.8
Glyma.05G146600 Glycine max HOM05D001171 ORTHO05D006126 7.6e-221 770.8 638 61.3
Phvul.002G174700 Phaseolus vulgaris HOM05D001171 ORTHO05D006126 9.9e-221 770.4 638 61.0
Haze_12399 Corylus avellana HOM05D001171 ORTHO05D006126 8.4e-220 767.3 629 63.6
MSTRG.2457 Avicennia marina HOM05D001171 ORTHO05D006126 7.1e-219 764.2 646 61.0
Potri.010G060500 Populus trichocarpa HOM05D001171 ORTHO05D006126 1.2e-218 763.5 643 61.9
HanXRQChr08g0207751 Helianthus annuus HOM05D001171 ORTHO05D006126 2.1e-218 762.7 642 59.3
Atru.chr11.2309 Acer truncatum HOM05D001171 ORTHO05D006126 2.7e-218 762.3 657 59.8
PSO063G5985 Papaver somniferum HOM05D001171 ORTHO05D006126 2.7e-218 762.3 642 59.7
PSO782G3690 Papaver somniferum HOM05D001171 ORTHO05D006126 2.7e-218 762.3 644 59.6
Sed0016407 Sechium edule HOM05D001171 ORTHO05D006126 3.5e-218 761.9 642 60.6
Ca_18053_v3 Cicer arietinum L. HOM05D001171 ORTHO05D006126 3.0e-217 758.8 638 59.7
CSS0011449 Camellia sinensis var. sinensis HOM05D001171 ORTHO05D006126 6.7e-217 757.7 673 59.9
TPR.G17090 Trifolium pratense HOM05D001171 ORTHO05D006126 1.9e-216 756.1 638 59.7
PGR102G0186 Punica granatum HOM05D001171 ORTHO05D006126 1.3e-215 753.4 642 59.7
CANSAT01G1884 Cannabis sativa HOM05D001171 ORTHO05D006126 1.4e-214 750.0 642 61.1
Nitab4.5_0001098g0040 Nicotiana tabacum HOM05D001171 ORTHO05D006126 2.0e-213 746.1 661 59.5
Lj3C1067G5 Lonicera japonica HOM05D001171 ORTHO05D006126 5.8e-213 744.6 629 62.0
arahy.Tifrunner.gnm1.ann1.8PLQ7K Arachis hypogaea HOM05D001171 ORTHO05D006126 2.2e-212 742.7 638 59.4
VMungo0251G3321 Vigna mungo HOM05D001171 ORTHO05D006126 2.9e-212 742.3 622 59.8
MELO3C011454.2 Cucumis melo HOM05D001171 ORTHO05D006126 1.1e-211 740.3 642 58.9
Medtr8g080470 Medicago truncatula HOM05D001171 ORTHO05D006126 1.1e-211 740.3 638 58.8
Oeu058919.3 Olea europaea HOM05D001171 ORTHO05D006126 7.1e-211 737.6 598 63.4
Eucgr.B03486 Eucalyptus grandis HOM05D001171 ORTHO05D006126 9.3e-211 737.3 642 59.2
MBI11_g07459_MAGBIO Magnolia biondii HOM05D001171 ORTHO05D006126 1.2e-210 736.9 653 58.3
ECA233G4311 Erigeron canadensis HOM05D001171 ORTHO05D006126 1.6e-210 736.5 634 57.7
Lalb_Chr13g0294301 Lupinus albus HOM05D001171 ORTHO05D006126 1.5e-208 729.9 638 59.1
CsaV3_6G032260 Cucumis sativus L. HOM05D001171 ORTHO05D006126 3.3e-208 728.8 642 58.1
Lalb_Chr12g0206251 Lupinus albus HOM05D001171 ORTHO05D006126 3.7e-207 725.3 638 58.0
ClCG08G010100 Citrullus lanatus HOM05D001171 ORTHO05D006126 4.9e-204 714.9 632 58.4
SalBow8G5464 Salvia bowleyana HOM05D001171 ORTHO05D006126 1.9e-203 713.0 638 58.3
Duzib268G1390 Durio zibethinus HOM05D001171 ORTHO05D006126 3.0e-201 705.7 642 58.9
SGA_v2.0_scaffold87G27147 Striga asiatica HOM05D001171 ORTHO05D006126 3.0e-201 705.7 642 57.3
AUR62024123 Chenopodium quinoa HOM05D001171 ORTHO05D006126 8.2e-199 697.6 643 56.5
Lsat_1_v5_gn_8_149401 Lactuca sativa HOM05D001171 ORTHO05D006126 3.1e-198 695.7 635 56.2
AUR62005606 Chenopodium quinoa HOM05D001171 ORTHO05D006126 6.9e-198 694.5 643 55.8
EL10Ac6g13486 Beta vulgaris HOM05D001171 ORTHO05D006126 2.2e-196 689.5 649 55.8
FAN22G1166 Fragaria x ananassa HOM05D001171 ORTHO05D006126 5.0e-196 688.3 511 65.8
FAN12G3364 Fragaria x ananassa HOM05D001171 ORTHO05D006126 5.5e-195 684.9 511 65.6
THA.LOC104825512 Tarenaya hassleriana HOM05D001171 ORTHO05D006126 2.6e-189 666.0 644 53.6
ATR0561G160 Amborella trichopoda HOM05D001171 ORTHO05D006126 1.0e-188 664.1 642 53.0
CDE05G2832 Ceratophyllum demersum HOM05D001171 ORTHO05D006126 6.5e-188 661.4 645 54.4
Glyma.08G103300 Glycine max HOM05D001171 ORTHO05D006126 6.5e-188 661.4 562 60.3
HPP92_007002 Vanilla planifolia HOM05D001171 ORTHO05D006126 5.5e-187 658.3 639 53.1
Carub.0002s1375 Capsella rubella HOM05D001171 ORTHO05D006126 4.8e-183 645.2 642 51.9
Thhalv10018109m.g Eutrema salsugineum HOM05D001171 ORTHO05D006126 4.8e-183 645.2 642 52.2
BcaB03g15201 Brassica carinata HOM05D001171 ORTHO05D006126 4.5e-181 638.6 642 51.2
Sp5g22350 Schrenkiella parvula HOM05D001171 ORTHO05D006126 1.3e-180 637.1 642 51.6
CARHR059950 Cardamine hirsuta HOM05D001171 ORTHO05D006126 1.7e-180 636.7 642 50.8
BraA07t31024Z Brassica rapa HOM05D001171 ORTHO05D006126 1.4e-179 633.6 642 50.9
AT1G67420 Arabidopsis thaliana HOM05D001171 ORTHO05D006126 1.9e-179 633.3 663 50.5
BolC6t39150H Brassica oleracea HOM05D001171 ORTHO05D006126 1.9e-179 633.3 642 50.9
BcaC08g46164 Brassica carinata HOM05D001171 ORTHO05D006126 3.2e-179 632.5 642 50.9
C06p42880 Brassica napus HOM05D001171 ORTHO05D006126 3.2e-179 632.5 642 50.8
A07p33970 Brassica napus HOM05D001171 ORTHO05D006126 7.2e-179 631.3 642 50.8
Aa31sc475G10 Aethionema arabicum HOM05D001171 ORTHO05D006126 9.4e-179 630.9 667 50.4
C06p38700 Brassica napus HOM05D001171 ORTHO05D006126 2.3e-177 626.3 643 51.2
A07p32560 Brassica napus HOM05D001171 ORTHO05D006126 3.9e-177 625.5 642 50.0
Zm00001eb305460 Zea mays HOM05D001171 ORTHO05D006126 3.3e-176 622.5 641 51.8
BraA07t30880Z Brassica rapa HOM05D001171 ORTHO05D006126 4.4e-176 622.1 642 50.3
Os07g0295800 Oryza sativa ssp. japonica HOM05D001171 ORTHO05D006126 6.3e-175 618.2 639 51.2
BolC6t38960H Brassica oleracea HOM05D001171 ORTHO05D006126 5.3e-174 615.1 666 49.5
BcaB03g15356 Brassica carinata HOM05D001171 ORTHO05D006126 2.6e-173 612.8 645 50.2
Hund06085 Selenicereus undatus HOM05D001171 ORTHO05D006126 3.8e-172 609.0 651 52.4
Sc11g0000480 Simmondsia chinensis HOM05D001171 ORTHO05D006126 6.6e-156 555.1 537 55.3
Cpa.g.sc43.41 Carica papaya HOM05D001171 ORTHO05D006126 5.5e-155 552.0 518 57.1
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 2.8e-154 549.7 720 45.4
Psat7g077720 Pisum sativum HOM05D001171 ORTHO05D006126 4.4e-152 542.3 481 57.4
Haze_12401 Corylus avellana HOM05D001171 ORTHO05D006126 1.4e-150 537.3 483 59.4
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 3.9e-140 502.7 483 56.1
SHI17955 Sapria himalayana HOM05D001171 ORTHO05D006126 8.0e-138 495.0 628 48.4
Sabra10G0045500 Salix brachista HOM05D001171 ORTHO05D006126 3.4e-136 489.6 524 54.2
Mapoly0009s0031 Marchantia polymorpha HOM05D001171 ORTHO05D006126 3.3e-115 419.9 645 38.0
vmacro16110 Vaccinium macrocarpon HOM05D001171 ORTHO05D006126 8.4e-111 405.2 655 42.7
Nitab4.5_0000011g0310 Nicotiana tabacum HOM05D001171 ORTHO05D006126 7.1e-110 402.1 291 68.4
unitig_744.g24422 Utricularia gibba HOM05D001171 ORTHO05D006126 2.8e-106 390.2 607 41.2
AagrBONN_evm.TU.Sc2ySwM_344.2095 Anthoceros agrestis HOM05D001171 ORTHO05D006126 2.8e-98 363.6 571 38.2
Pp3c11_25820 Physcomitrium patens HOM05D001171 ORTHO05D006126 7.6e-96 355.5 649 33.7
SMO116G0357 Selaginella moellendorffii HOM05D001171 ORTHO05D006126 1.3e-92 344.7 651 34.7
Gohir.A01G160800 Gossypium hirsutum HOM05D001171 ORTHO05D006126 1.5e-83 314.7 313 56.2
arahy.Tifrunner.gnm1.ann1.BTPC7R Arachis hypogaea HOM05D001171 ORTHO05D006126 7.4e-83 312.4 286 56.3
GSVIVG01029097001 Vitis vinifera HOM05D001171 ORTHO05D006126 5.2e-52 209.9 138 71.7
Cpa.g.sc351.6 Carica papaya HOM05D001171 ORTHO05D006126 2.4e-49 201.1 184 55.4
SEGI_39555 Sequoiadendron giganteum HOM05D001171 ORTHO05D006126 2.0e-48 198.0 159 59.7
Nitab4.5_0000011g0290 Nicotiana tabacum HOM05D001171 ORTHO05D006126 1.7e-39 168.3 206 47.6
Sabra10G0045600 Salix brachista HOM05D001171 ORTHO05D006126 2.3e-36 157.9 105 68.6
Peaxi162Scf00548g00418 Petunia axillaris HOM05D001171 ORTHO05D006126 2.8e-29 134.4 104 65.4
Peaxi162Scf00768g00005 Petunia axillaris HOM05D001171 ORTHO05D006126 2.8e-29 134.4 104 65.4
Peaxi162Scf00134g00811 Petunia axillaris HOM05D001171 ORTHO05D006126 2.3e-28 131.3 96 65.6
CBR_g21983 Chara braunii HOM05D001171 ORTHO05D006126 9.2e-25 119.4 325 30.2
arahy.Tifrunner.gnm1.ann1.N08USM Arachis hypogaea HOM05D001171 ORTHO05D006126 1.4e-20 105.5 261 33.3
AUR62043637 Chenopodium quinoa HOM05D000055 ORTHO05D000057 7.1e-09 66.6 102 40.2
Peaxi162Scf00086g01218 Petunia axillaris HOM05D001171 ORTHO05D006126 8.6e-07 59.7 82 40.2
Gohir.D02G103300 Gossypium hirsutum HOM05D001171 ORTHO05D006126 5.6e-06 57.0 30 83.3


User provided reference genes

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