Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14823 Davidia involucrata HOM05D001222 ORTHO05D184060 2.7e-30 134.8 73 100.0
Dinv09434 Davidia involucrata HOM05D001222 ORTHO05D000267 3.6e-11 71.2 46 89.1
GSVIVG01036934001 Vitis vinifera HOM05D001222 ORTHO05D001195 2.6e-09 65.1 47 76.6
MD06G1021700 Malus domestica HOM05D001222 ORTHO05D001195 4.4e-09 64.3 52 71.2
TAR629G0053 Trochodendron aralioides HOM05D001222 ORTHO05D001195 4.4e-09 64.3 46 78.3
CiPaw.11G105100 Carya illinoinensis HOM05D001222 ORTHO05D001195 5.8e-09 63.9 46 78.3
Nn1g09212 Nelumbo nucifera HOM05D001222 ORTHO05D001195 7.5e-09 63.5 46 80.4
FvH4_5g24360 Fragaria vesca HOM05D001222 ORTHO05D001195 9.8e-09 63.2 46 76.1
FAN08G1331 Fragaria x ananassa HOM05D001222 ORTHO05D001195 9.8e-09 63.2 46 76.1
FAN18G3315 Fragaria x ananassa HOM05D001222 ORTHO05D001195 9.8e-09 63.2 46 76.1
RcHm_v2.0_Chr7g0214731 Rosa chinensis HOM05D001222 ORTHO05D001195 9.8e-09 63.2 46 76.1
Cc00_g13350 Coffea canephora HOM05D001222 ORTHO05D001195 1.7e-08 62.4 46 78.3
Duzib205G0677 Durio zibethinus HOM05D001222 ORTHO05D001195 2.2e-08 62.0 49 71.4
ATR0829G117 Amborella trichopoda HOM05D001222 ORTHO05D001195 2.9e-08 61.6 47 68.1
SGA_v2.0_scaffold27G11716 Striga asiatica HOM05D001222 ORTHO05D001195 4.9e-08 60.8 46 73.9
CiPaw.12G073100 Carya illinoinensis HOM05D001222 ORTHO05D001195 6.4e-08 60.5 47 72.3
Thecc.03G323700 Theobroma cacao HOM05D001222 ORTHO05D001195 6.4e-08 60.5 49 69.4
Haze_08006 Corylus avellana HOM05D001222 ORTHO05D001195 8.3e-08 60.1 46 73.9
Peaxi162Scf00445g00513 Petunia axillaris HOM05D001222 ORTHO05D001195 1.4e-07 59.3 47 72.3
SMO367G0690 Selaginella moellendorffii HOM05D001222 ORTHO05D001195 1.4e-07 59.3 57 59.6
MSTRG.25760 Avicennia marina HOM05D001222 ORTHO05D001195 1.9e-07 58.9 47 72.3
Eucgr.E01201 Eucalyptus grandis HOM05D001222 ORTHO05D001195 3.2e-07 58.2 57 63.2
Mapoly0102s0021 Marchantia polymorpha HOM05D001222 ORTHO05D001195 3.2e-07 58.2 47 66.0
QL02p100040 Quercus lobata HOM05D001222 ORTHO05D001195 3.2e-07 58.2 46 69.6
vmacro21698 Vaccinium macrocarpon HOM05D001222 ORTHO05D001195 3.2e-07 58.2 47 66.0
HPP92_007402 Vanilla planifolia HOM05D001222 ORTHO05D001195 3.2e-07 58.2 50 64.0
CAN.G1214.3 Capsicum annuum HOM05D001222 ORTHO05D001195 4.1e-07 57.8 46 71.7
Lj8A379G37 Lonicera japonica HOM05D001222 ORTHO05D001195 4.1e-07 57.8 46 73.9
Solyc08g074780.3 Solanum lycopersicum HOM05D001222 ORTHO05D001195 4.1e-07 57.8 46 71.7
Sopen08g023370 Solanum pennellii HOM05D001222 ORTHO05D001195 4.1e-07 57.8 46 71.7
CSS0029374 Camellia sinensis var. sinensis HOM05D001222 ORTHO05D001195 5.4e-07 57.4 47 66.0
CSS0034340 Camellia sinensis var. sinensis HOM05D001222 ORTHO05D001195 5.4e-07 57.4 47 66.0
PSO063G6020 Papaver somniferum HOM05D001222 ORTHO05D001195 5.4e-07 57.4 46 69.6
SalBow4G0871 Salvia bowleyana HOM05D001222 ORTHO05D001195 5.4e-07 57.4 52 65.4
Cc10_g02130 Coffea canephora HOM05D001222 ORTHO05D001195 7.0e-07 57.0 58 56.9
COL.COLO4_16713 Corchorus olitorius HOM05D001222 ORTHO05D001195 7.0e-07 57.0 49 67.3
Migut.A00501 Erythranthe guttata HOM05D001222 ORTHO05D001195 7.0e-07 57.0 46 69.6
Nitab4.5_0001639g0060 Nicotiana tabacum HOM05D001222 ORTHO05D001195 7.0e-07 57.0 46 71.7
Hma1.2p1_1256F.1_g270680 Hydrangea macrophylla HOM05D001222 ORTHO05D001195 9.2e-07 56.6 48 68.8
Prupe.5G017200 Prunus persica HOM05D001222 ORTHO05D001195 9.2e-07 56.6 46 69.6
Rhsim06G0026800 Rhododendron simsii HOM05D001222 ORTHO05D001195 9.2e-07 56.6 47 61.7
Cpa.g.sc463.1 Carica papaya HOM05D001222 ORTHO05D033652 1.2e-06 56.2 51 60.8
CsaV3_4G037930 Cucumis sativus L. HOM05D001222 ORTHO05D001195 1.2e-06 56.2 46 65.2
Lalb_Chr16g0380591 Lupinus albus HOM05D001222 ORTHO05D001195 1.2e-06 56.2 57 59.6
PGSC0003DMG400030067 Solanum tuberosum HOM05D001222 ORTHO05D001195 1.2e-06 56.2 46 69.6
Cpa.g.sc150.30 Carica papaya HOM05D001222 ORTHO05D001195 1.6e-06 55.8 57 57.9
Os04g0539800 Oryza sativa ssp. japonica HOM05D001222 ORTHO05D001195 1.6e-06 55.8 57 57.9
TWI31G1138 Tripterygium wilfordii HOM05D001222 ORTHO05D001195 1.6e-06 55.8 47 63.8
Actinidia03560 Actinidia chinensis HOM05D001222 ORTHO05D001195 2.0e-06 55.5 46 69.6
CSS0028361 Camellia sinensis var. sinensis HOM05D001222 ORTHO05D001195 2.0e-06 55.5 46 67.4
Cfa005094 Carpinus fangiana HOM05D001222 ORTHO05D001195 2.0e-06 55.5 47 63.8
Ca_20929_v3 Cicer arietinum L. HOM05D001222 ORTHO05D001195 2.0e-06 55.5 57 56.1
Haze_02271 Corylus avellana HOM05D001222 ORTHO05D001195 2.0e-06 55.5 47 63.8
Haze_02277 Corylus avellana HOM05D001222 ORTHO05D001195 2.0e-06 55.5 47 63.8
ECA246G1371 Erigeron canadensis HOM05D000763 ORTHO05D004340 2.0e-06 55.5 46 67.4
Gohir.A05G276400 Gossypium hirsutum HOM05D001222 ORTHO05D001195 2.0e-06 55.5 49 65.3
Gohir.D05G278100 Gossypium hirsutum HOM05D001222 ORTHO05D001195 2.0e-06 55.5 49 65.3
Gorai.009G291600 Gossypium raimondii HOM05D001222 ORTHO05D001195 2.0e-06 55.5 49 65.3
HanXRQChr12g0384071 Helianthus annuus HOM05D001222 ORTHO05D001195 2.0e-06 55.5 46 69.6
AagrBONN_evm.TU.Sc2ySwM_117.675 Anthoceros agrestis HOM05D001222 ORTHO05D001195 2.7e-06 55.1 47 63.8
ECA247G0146 Erigeron canadensis HOM05D001222 ORTHO05D001195 2.7e-06 55.1 58 56.9
Manes.17G005400 Manihot esculenta HOM05D001222 ORTHO05D001195 2.7e-06 55.1 49 65.3
Manes.17G064300 Manihot esculenta HOM05D001222 ORTHO05D001195 2.7e-06 55.1 47 61.7
Nn6g32219 Nelumbo nucifera HOM05D001222 ORTHO05D001195 3.5e-06 54.7 47 63.8
Oeu018121.1 Olea europaea HOM05D001222 ORTHO05D001195 3.5e-06 54.7 57 56.1
THA.LOC104807295 Tarenaya hassleriana HOM05D001222 ORTHO05D001195 3.5e-06 54.7 57 56.1
Actinidia15386 Actinidia chinensis HOM05D001222 ORTHO05D001195 4.6e-06 54.3 47 61.7
CDE08G1542 Ceratophyllum demersum HOM05D001222 ORTHO05D001195 4.6e-06 54.3 47 61.7
ClCG11G016230 Citrullus lanatus HOM05D001222 ORTHO05D001195 4.6e-06 54.3 46 63.0
Gohir.D02G219900 Gossypium hirsutum HOM05D001222 ORTHO05D001195 4.6e-06 54.3 47 59.6
Gorai.005G247800 Gossypium raimondii HOM05D001222 ORTHO05D001195 4.6e-06 54.3 47 59.6
Lj1g0027647 Lotus japonicus HOM05D001222 ORTHO05D001195 4.6e-06 54.3 57 56.1
Nitab4.5_0000352g0050 Nicotiana tabacum HOM05D001222 ORTHO05D001195 4.6e-06 54.3 47 61.7
Nitab4.5_0004368g0030 Nicotiana tabacum HOM05D001222 ORTHO05D001195 4.6e-06 54.3 47 61.7
Peaxi162Scf00016g00134 Petunia axillaris HOM05D001222 ORTHO05D001195 4.6e-06 54.3 47 61.7
Sabra04G0108200 Salix brachista HOM05D001222 ORTHO05D001195 4.6e-06 54.3 57 56.1
SEGI_39948 Sequoiadendron giganteum HOM05D001222 ORTHO05D001195 4.6e-06 54.3 58 51.7
Actinidia22496 Actinidia chinensis HOM05D001222 ORTHO05D001195 6.0e-06 53.9 47 61.7
ATR0661G565 Amborella trichopoda HOM05D001222 ORTHO05D001195 6.0e-06 53.9 47 63.8
CAN.G170.89 Capsicum annuum HOM05D001222 ORTHO05D001195 6.0e-06 53.9 47 61.7
Ca_15342_v3 Cicer arietinum L. HOM05D001222 ORTHO05D001195 6.0e-06 53.9 57 56.1
ClCG11G003960 Citrullus lanatus HOM05D001222 ORTHO05D001195 6.0e-06 53.9 57 54.4
MELO3C023347.2 Cucumis melo HOM05D001222 ORTHO05D001195 6.0e-06 53.9 57 54.4
Gohir.A03G198500 Gossypium hirsutum HOM05D001222 ORTHO05D001195 6.0e-06 53.9 47 57.4
Lsat_1_v5_gn_1_16380 Lactuca sativa HOM05D001222 ORTHO05D001195 6.0e-06 53.9 58 51.7
Nitab4.5_0009169g0010 Nicotiana tabacum HOM05D001222 ORTHO05D001195 6.0e-06 53.9 47 61.7
SEGI_35663 Sequoiadendron giganteum HOM05D001222 ORTHO05D001195 6.0e-06 53.9 47 59.6
Sc05g0006640 Simmondsia chinensis HOM05D001222 ORTHO05D001195 6.0e-06 53.9 47 59.6
arahy.Tifrunner.gnm1.ann1.QJ9BXX Arachis hypogaea HOM05D001222 ORTHO05D001195 7.8e-06 53.5 57 56.1
arahy.Tifrunner.gnm1.ann1.VGJ3AW Arachis hypogaea HOM05D001222 ORTHO05D001195 7.8e-06 53.5 57 56.1
CiPaw.06G129200 Carya illinoinensis HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 61.7
MELO3C010543.2 Cucumis melo HOM05D001222 ORTHO05D001195 7.8e-06 53.5 46 60.9
CsaV3_2G015220 Cucumis sativus L. HOM05D001222 ORTHO05D001195 7.8e-06 53.5 57 54.4
Dinv42010 Davidia involucrata HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 61.7
HanXRQChr02g0041781 Helianthus annuus HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 59.6
Lj4A29T65 Lonicera japonica HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 59.6
PSO170G3802 Papaver somniferum HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 61.7
PSO210G1532 Papaver somniferum HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 61.7
PSO541G3115 Papaver somniferum HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 61.7
Phvul.002G125000 Phaseolus vulgaris HOM05D001222 ORTHO05D001195 7.8e-06 53.5 57 57.9
Psat7g182160 Pisum sativum HOM05D001222 ORTHO05D001195 7.8e-06 53.5 57 54.4
SalBow3G3913 Salvia bowleyana HOM05D001222 ORTHO05D001195 7.8e-06 53.5 57 54.4
Sed0013023 Sechium edule HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 59.6
TAR625G0007 Trochodendron aralioides HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 61.7
TAR626G1545 Trochodendron aralioides HOM05D001222 ORTHO05D001195 7.8e-06 53.5 47 57.4
HPP92_014404 Vanilla planifolia HOM05D001222 ORTHO05D001195 7.8e-06 53.5 52 59.6
VMungo1215G3356 Vigna mungo HOM05D001222 ORTHO05D001195 7.8e-06 53.5 57 57.9


User provided reference genes

Program Settings