Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14807 Davidia involucrata HOM05D000151 ORTHO05D000074 4.9e-87 324.3 152 100.0
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 9.5e-14 80.9 145 34.5
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 9.5e-14 80.9 145 34.5
MBI18_g17004_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.1e-13 78.2 155 31.6
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.3e-12 76.3 119 31.9
TAR376G0134 Trochodendron aralioides HOM05D001286 ORTHO05D000440 8.9e-12 74.3 133 32.3
TWI38G1063 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.5e-11 73.6 121 31.4
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.7e-11 71.6 114 28.9
RcHm_v2.0_Chr1g0339581 Rosa chinensis HOM05D000151 ORTHO05D000074 1.3e-10 70.5 121 34.7
Sopen08g002150 Solanum pennellii HOM05D000151 ORTHO05D000074 1.3e-10 70.5 146 30.1
PSO210G2694 Papaver somniferum HOM05D000151 ORTHO05D000074 2.2e-10 69.7 115 33.9
FvH4_7g10560 Fragaria vesca HOM05D000151 ORTHO05D000074 2.9e-10 69.3 132 34.1
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 2.9e-10 69.3 129 32.6
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-10 69.3 108 34.3
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-10 69.3 108 34.3
CSS0034097 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 3.7e-10 68.9 114 33.3
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 3.7e-10 68.9 129 31.8
Lj2C471T6 Lonicera japonica HOM05D000151 ORTHO05D000074 4.9e-10 68.6 121 31.4
Lj3C74T1 Lonicera japonica HOM05D000151 ORTHO05D000074 4.9e-10 68.6 120 30.8
Aqoxy7G01775 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.3e-10 67.8 157 32.5
Manes.07G048900 Manihot esculenta HOM05D000151 ORTHO05D000074 8.3e-10 67.8 129 31.8
Cfa014059 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.4e-09 67.0 122 31.1
Lj3A74T15 Lonicera japonica HOM05D000151 ORTHO05D000074 1.4e-09 67.0 114 31.6
RcHm_v2.0_Chr4g0395901 Rosa chinensis HOM05D026880 ORTHO05D029589 1.4e-09 67.0 145 32.4
TWI38G2055 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.4e-09 67.0 122 30.3
TAR636G0219 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-09 67.0 114 32.5
TAR636G2580 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-09 67.0 114 32.5
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-09 66.6 139 33.1
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-09 66.6 159 32.7
MBI17_g17509_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.8e-09 66.6 151 29.8
Haze_22777 Corylus avellana HOM05D000151 ORTHO05D000074 2.4e-09 66.2 135 28.9
Medtr7g104790 Medicago truncatula HOM05D001286 ORTHO05D000440 2.4e-09 66.2 148 30.4
Aqoxy2G01392 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.2e-09 65.9 147 30.6
MSTRG.1137 Avicennia marina HOM05D000151 ORTHO05D000074 3.2e-09 65.9 111 28.8
Aqoxy4G01250 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.1e-09 65.5 129 31.8
Solyc08g006180.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.1e-09 65.5 148 29.7
PGSC0003DMG402009543 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.1e-09 65.5 148 29.7
BcaB01g01734 Brassica carinata HOM05D001286 ORTHO05D000440 9.2e-09 64.3 139 33.8
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 9.2e-09 64.3 113 31.9
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.2e-08 63.9 113 33.6
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 1.2e-08 63.9 116 28.4
FvH4_6g22212 Fragaria vesca HOM05D010931 ORTHO05D016562 1.6e-08 63.5 149 26.8
Lj2C479T1 Lonicera japonica HOM05D000151 ORTHO05D000074 1.6e-08 63.5 120 31.7
MBI16_g22434_MAGBIO Magnolia biondii HOM05D001458 ORTHO05D000074 1.6e-08 63.5 120 32.5
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 1.6e-08 63.5 137 29.9
Nn7g38181 Nelumbo nucifera HOM05D001286 ORTHO05D000440 1.6e-08 63.5 118 32.2
Aqoxy2G01395 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.0e-08 63.2 154 30.5
Lj2P476T19 Lonicera japonica HOM05D000151 ORTHO05D000074 2.0e-08 63.2 101 31.7
MBI18_g40419_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.0e-08 63.2 114 31.6
MBI18_g45941_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.0e-08 63.2 118 31.4
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.7e-08 62.8 117 30.8
Aqoxy5G01075 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.7e-08 62.8 120 30.0
Cfa005279 Carpinus fangiana HOM05D007346 ORTHO05D009044 2.7e-08 62.8 116 31.0
Haze_02115 Corylus avellana HOM05D007346 ORTHO05D009044 2.7e-08 62.8 116 31.0
RcHm_v2.0_Chr3g0476221 Rosa chinensis HOM05D024214 ORTHO05D016562 2.7e-08 62.8 170 28.8
Sp6g05180 Schrenkiella parvula HOM05D001286 ORTHO05D000440 2.7e-08 62.8 137 31.4
Cfa012527 Carpinus fangiana HOM05D007346 ORTHO05D009044 3.5e-08 62.4 116 27.6
Haze_02114 Corylus avellana HOM05D007346 ORTHO05D009044 3.5e-08 62.4 116 31.0
Eucgr.B03809 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.5e-08 62.4 109 31.2
Solyc04g082060.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 3.5e-08 62.4 126 30.2
PGSC0003DMG400009960 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.5e-08 62.4 114 32.5
Sopen04g035710 Solanum pennellii HOM05D000151 ORTHO05D000074 4.6e-08 62.0 126 30.2
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.6e-08 62.0 108 29.6
TAR628G1131 Trochodendron aralioides HOM05D001286 ORTHO05D000440 4.6e-08 62.0 134 29.1
TPR.G23337 Trifolium pratense HOM05D001286 ORTHO05D000440 5.9e-08 61.6 152 28.3
Ah.15g090840 Amaranthus hybridus HOM05D001286 ORTHO05D000440 7.8e-08 61.2 129 29.5
Duzib106G1385 Durio zibethinus HOM05D001286 ORTHO05D000440 7.8e-08 61.2 137 28.5
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.8e-08 61.2 119 29.4
FvH4_4g05011 Fragaria vesca HOM05D000151 ORTHO05D000074 7.8e-08 61.2 135 32.6
Aqoxy3G03868 Aquilegia oxysepala HOM05D007346 ORTHO05D009044 1.0e-07 60.8 114 30.7
Eucgr.E02335 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.0e-07 60.8 111 30.6
Cfa005278 Carpinus fangiana HOM05D007346 ORTHO05D009044 1.3e-07 60.5 116 31.0
Cfa005319 Carpinus fangiana HOM05D007346 ORTHO05D009044 1.3e-07 60.5 116 30.2
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 1.3e-07 60.5 111 29.7
Eucgr.E02338 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.3e-07 60.5 111 30.6
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.3e-07 60.5 115 28.7
Os06g0707300 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 1.3e-07 60.5 130 29.2
Aqoxy3G03870 Aquilegia oxysepala HOM05D007346 ORTHO05D016562 2.3e-07 59.7 114 30.7
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.3e-07 59.7 116 29.3
CANSAT01G2492 Cannabis sativa HOM05D008995 ORTHO05D000074 2.3e-07 59.7 145 29.0
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 2.3e-07 59.7 114 29.8
Lsat_1_v5_gn_9_46700 Lactuca sativa HOM05D000151 ORTHO05D000074 2.3e-07 59.7 140 30.7
Lj2P494T20 Lonicera japonica HOM05D000151 ORTHO05D000074 2.3e-07 59.7 145 31.0
TAR636G0813 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.3e-07 59.7 109 31.2
Nn1g05876 Nelumbo nucifera HOM05D001286 ORTHO05D000440 3.0e-07 59.3 160 26.9
Actinidia05722 Actinidia chinensis HOM05D000127 ORTHO05D000440 3.9e-07 58.9 141 27.7
Dinv28488 Davidia involucrata HOM05D000151 ORTHO05D000074 3.9e-07 58.9 122 32.8
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.9e-07 58.9 154 24.7
Lsat_1_v5_gn_2_5520 Lactuca sativa HOM05D000151 ORTHO05D000074 5.0e-07 58.5 118 28.8
Sp6g05200 Schrenkiella parvula HOM05D001286 ORTHO05D000440 5.0e-07 58.5 137 29.9
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.6e-07 57.8 121 33.1
Aqoxy2G01390 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-06 57.4 153 30.1
FvH4_4g01970 Fragaria vesca HOM05D007346 ORTHO05D009044 1.1e-06 57.4 114 28.1
Prupe.6G178100 Prunus persica HOM05D008995 ORTHO05D000074 1.1e-06 57.4 148 27.0
Aqoxy3G03100 Aquilegia oxysepala HOM05D007346 ORTHO05D000074 1.5e-06 57.0 105 31.4
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.5e-06 57.0 118 30.5
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-06 57.0 162 30.9
Aqoxy6G00558 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-06 56.6 120 30.0
Duzib093G1514 Durio zibethinus HOM05D001286 ORTHO05D000440 1.9e-06 56.6 137 27.7
Lj2P495T35 Lonicera japonica HOM05D000151 ORTHO05D000074 1.9e-06 56.6 90 36.7
Aqoxy6G02936 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.5e-06 56.2 116 31.9
Aqoxy7G03842 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.5e-06 56.2 122 26.2
AL6G44750 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 2.5e-06 56.2 130 29.2
Haze_14264 Corylus avellana HOM05D001286 ORTHO05D000440 2.5e-06 56.2 139 30.9
Eucgr.E02334 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.5e-06 56.2 111 29.7
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 2.5e-06 56.2 112 31.2
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-06 56.2 112 31.2
Gohir.D04G099000 Gossypium hirsutum HOM05D001286 ORTHO05D000440 2.5e-06 56.2 130 26.2
Aqoxy3G01208 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.3e-06 55.8 120 32.5
Eucgr.E02968 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.3e-06 55.8 110 29.1
HanXRQChr05g0145731 Helianthus annuus HOM05D000151 ORTHO05D000074 3.3e-06 55.8 145 29.0
Aqoxy2G03785 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.3e-06 55.5 156 28.8
Aqoxy3G03869 Aquilegia oxysepala HOM05D007346 ORTHO05D009044 4.3e-06 55.5 114 28.9
Aqoxy5G01389 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.3e-06 55.5 130 30.8
Cfa007811 Carpinus fangiana HOM05D001286 ORTHO05D000440 4.3e-06 55.5 144 27.8
Dinv37449 Davidia involucrata HOM05D000306 ORTHO05D000074 4.3e-06 55.5 109 31.2
FvH4_4g02080 Fragaria vesca HOM05D007346 ORTHO05D009044 4.3e-06 55.5 114 28.1
Thecc.03G275800 Theobroma cacao HOM05D000151 ORTHO05D000074 4.3e-06 55.5 134 28.4
Aqoxy2G00530 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.6e-06 55.1 125 31.2
Aqoxy4G02688 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.6e-06 55.1 129 31.0
Aqoxy5G02614 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.6e-06 55.1 156 28.8
Cc11_g10930 Coffea canephora HOM05D000151 ORTHO05D000074 5.6e-06 55.1 138 29.7
Haze_22770 Corylus avellana HOM05D000151 ORTHO05D000074 5.6e-06 55.1 108 30.6
Nitab4.5_0000692g0040 Nicotiana tabacum HOM05D001286 ORTHO05D000440 5.6e-06 55.1 137 25.5
Nn5g27746 Nelumbo nucifera HOM05D000151 ORTHO05D000074 7.3e-06 54.7 140 30.7
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 9.5e-06 54.3 143 29.4
Cpa.g.sc130.16 Carica papaya HOM05D008753 ORTHO05D010999 9.5e-06 54.3 115 28.7
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 9.5e-06 54.3 118 28.8
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 9.5e-06 54.3 116 30.2


User provided reference genes

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