Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14741 Davidia involucrata HOM05D007686 ORTHO05D009709 3.4e-55 220.3 108 100.0
Gohir.D04G180200 Gossypium hirsutum HOM05D007686 ORTHO05D009709 2.1e-36 157.9 108 71.3
arahy.Tifrunner.gnm1.ann1.BXJH78 Arachis hypogaea HOM05D007686 ORTHO05D009709 2.3e-35 154.5 109 68.8
Sabra08G0140000 Salix brachista HOM05D007686 ORTHO05D009709 3.0e-35 154.1 108 67.6
Manes.13G022000 Manihot esculenta HOM05D007686 ORTHO05D009709 1.2e-34 152.1 108 68.5
Potri.008G185000 Populus trichocarpa HOM05D007686 ORTHO05D009709 1.5e-34 151.8 108 66.7
Manes.13G021400 Manihot esculenta HOM05D007686 ORTHO05D009709 5.7e-34 149.8 108 67.6
TWI36G0128 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 9.7e-34 149.1 107 67.3
Lalb_Chr07g0185471 Lupinus albus HOM05D007686 ORTHO05D009709 6.3e-33 146.4 106 67.9
TPR.G6255 Trifolium pratense HOM05D007686 ORTHO05D009709 1.3e-30 138.7 109 64.2
Psat7g058760 Pisum sativum HOM05D007686 ORTHO05D009709 2.9e-30 137.5 109 63.3
Medtr8g089700 Medicago truncatula HOM05D007686 ORTHO05D009709 3.8e-30 137.1 109 63.3
Glyma.05G173932 Glycine max HOM05D007686 ORTHO05D009709 1.8e-27 128.3 113 62.8
Ca_17785_v3 Cicer arietinum L. HOM05D007686 ORTHO05D009709 5.2e-27 126.7 109 59.6
Gohir.A04G137000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 6.8e-27 126.3 108 59.3
FAN12G1967 Fragaria x ananassa HOM05D007686 ORTHO05D009709 8.8e-27 125.9 79 74.7
RcHm_v2.0_Chr4g0432731 Rosa chinensis HOM05D007686 ORTHO05D009709 8.8e-27 125.9 80 72.5
Lj4g0016926 Lotus japonicus HOM05D007686 ORTHO05D009709 1.5e-26 125.2 112 58.9
TWI18G1075 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 1.5e-26 125.2 79 74.7
Glyma.08G131100 Glycine max HOM05D007686 ORTHO05D009709 2.0e-26 124.8 113 61.9
HanXRQChr08g0208401 Helianthus annuus HOM05D007686 ORTHO05D009709 2.0e-26 124.8 77 75.3
Prupe.1G242700 Prunus persica HOM05D007686 ORTHO05D009709 7.5e-26 122.9 77 74.0
Cpa.g.sc33.48 Carica papaya HOM05D007686 ORTHO05D009709 1.3e-25 122.1 83 71.1
Phvul.002G258900 Phaseolus vulgaris HOM05D007686 ORTHO05D009709 1.3e-25 122.1 111 62.2
CANSAT01G2773 Cannabis sativa HOM05D007686 ORTHO05D009709 2.8e-25 120.9 78 74.4
SGA_v2.0_scaffold100G29576 Striga asiatica HOM05D007686 ORTHO05D009709 2.8e-25 120.9 81 65.4
CiPaw.05G168000 Carya illinoinensis HOM05D007686 ORTHO05D009709 6.3e-25 119.8 81 70.4
Migut.K00622 Erythranthe guttata HOM05D007686 ORTHO05D009709 1.4e-24 118.6 80 68.8
PGR119G1810 Punica granatum HOM05D007686 ORTHO05D009709 1.8e-24 118.2 82 68.3
ECA233G6157 Erigeron canadensis HOM05D007686 ORTHO05D009709 3.1e-24 117.5 76 75.0
CSS0050065 Camellia sinensis var. sinensis HOM05D007686 ORTHO05D009709 7.0e-24 116.3 62 90.3
Gohir.A03G132900 Gossypium hirsutum HOM05D007686 ORTHO05D009709 9.1e-24 115.9 74 75.7
Lsat_1_v5_gn_8_152860 Lactuca sativa HOM05D007686 ORTHO05D009709 2.0e-23 114.8 74 73.0
MD13G1103100 Malus domestica HOM05D007686 ORTHO05D009709 7.7e-23 112.8 68 77.9
Solyc06g008190.1 Solanum lycopersicum HOM05D007686 ORTHO05D009709 1.0e-22 112.5 67 77.6
Sopen06g003050 Solanum pennellii HOM05D007686 ORTHO05D009709 1.0e-22 112.5 67 77.6
Thecc.02G263700 Theobroma cacao HOM05D007686 ORTHO05D009709 1.0e-22 112.5 81 67.9
Ciclev10031251m.g Citrus clementina HOM05D007686 ORTHO05D009709 2.3e-22 111.3 80 67.5
Hma1.2p1_0815F.1_g222720 Hydrangea macrophylla HOM05D007686 ORTHO05D009709 1.1e-21 109.0 60 86.7
Lj3P1060G37 Lonicera japonica HOM05D007686 ORTHO05D009709 1.2e-20 105.5 66 74.2
Nitab4.5_0000067g0230 Nicotiana tabacum HOM05D007686 ORTHO05D009709 3.6e-20 104.0 63 76.2
Os07g0688100 Oryza sativa ssp. japonica HOM05D007686 ORTHO05D009709 3.6e-20 104.0 100 48.0
CsaV3_5G030960 Cucumis sativus L. HOM05D007686 ORTHO05D009709 1.0e-19 102.4 77 64.9
Sed0013465 Sechium edule HOM05D007686 ORTHO05D009709 1.4e-19 102.1 77 64.9
Eucgr.H02473 Eucalyptus grandis HOM05D007686 ORTHO05D009709 3.0e-19 100.9 76 63.2
ClCG05G025900 Citrullus lanatus HOM05D007686 ORTHO05D009709 4.0e-19 100.5 75 64.0
DCAR_031167 Daucus carota HOM05D002540 ORTHO05D002672 4.0e-19 100.5 67 71.6
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 4.0e-19 100.5 70 67.1
Nitab4.5_0001839g0010 Nicotiana tabacum HOM05D007686 ORTHO05D009709 6.8e-19 99.8 63 73.0
CDE05G1633 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 8.9e-19 99.4 74 64.9
GSVIVG01000559001 Vitis vinifera HOM05D007686 ORTHO05D009709 8.9e-19 99.4 59 76.3
MSTRG.555 Avicennia marina HOM05D007686 ORTHO05D009709 1.2e-18 99.0 66 69.7
AUR62011787 Chenopodium quinoa HOM05D007686 ORTHO05D009709 1.2e-18 99.0 66 69.7
Rhsim12G0039200 Rhododendron simsii HOM05D007686 ORTHO05D009709 3.4e-18 97.4 60 76.7
Gorai.012G173300 Gossypium raimondii HOM05D007686 ORTHO05D009709 4.4e-18 97.1 66 69.7
MD16G1103300 Malus domestica HOM05D007686 ORTHO05D009709 5.7e-18 96.7 59 78.0
QL03p056833 Quercus lobata HOM05D007686 ORTHO05D009709 2.8e-17 94.4 54 77.8
QL93p1848_0021 Quercus lobata HOM05D007686 ORTHO05D009709 2.8e-17 94.4 54 77.8
EL10Ac7g16785 Beta vulgaris HOM05D007686 ORTHO05D009709 2.7e-15 87.8 57 71.9
SHI17831 Sapria himalayana HOM05D007686 ORTHO05D009709 4.5e-15 87.0 81 58.0
Zm00001eb331140 Zea mays HOM05D007686 ORTHO05D009709 6.6e-14 83.2 74 55.4
COL.COLO4_23488 Corchorus olitorius HOM05D007686 ORTHO05D009709 9.5e-13 79.3 47 78.7
Sc06g0009620 Simmondsia chinensis HOM05D007686 ORTHO05D009709 9.5e-13 79.3 55 69.1
Atru.chr11.2166 Acer truncatum HOM05D007686 ORTHO05D009709 1.2e-12 79.0 53 69.8
FvH4_4g25420 Fragaria vesca HOM05D007686 ORTHO05D009709 2.1e-12 78.2 47 76.6
PSO724G0460 Papaver somniferum HOM05D007686 ORTHO05D009709 3.6e-12 77.4 59 64.4
Gorai.005G176400 Gossypium raimondii HOM05D007686 ORTHO05D009709 5.2e-11 73.6 81 53.1
PSO135G0590 Papaver somniferum HOM05D007686 ORTHO05D009709 5.2e-11 73.6 52 69.2
Aqoxy2G03020 Aquilegia oxysepala HOM05D007686 ORTHO05D009709 8.9e-11 72.8 48 72.9
PGSC0003DMG400014696 Solanum tuberosum HOM05D007686 ORTHO05D009709 8.9e-11 72.8 47 74.5
TAR383G0079 Trochodendron aralioides HOM05D007686 ORTHO05D009709 8.9e-11 72.8 46 73.9
CAN.G941.2 Capsicum annuum HOM05D007686 ORTHO05D009709 1.2e-10 72.4 165 31.5
AT1G13040 Arabidopsis thaliana HOM05D007686 ORTHO05D009709 1.5e-10 72.0 53 64.2
AL1G24690 Arabidopsis lyrata HOM05D007686 ORTHO05D009709 2.0e-10 71.6 53 64.2
Aa31LG1G1760 Aethionema arabicum HOM05D007686 ORTHO05D009709 5.8e-10 70.1 52 61.5
Sp1g11590 Schrenkiella parvula HOM05D007686 ORTHO05D009709 7.5e-10 69.7 53 62.3
Carub.0001s1279 Capsella rubella HOM05D007686 ORTHO05D009709 9.8e-10 69.3 53 62.3
THA.LOC104805275 Tarenaya hassleriana HOM05D007686 ORTHO05D009709 2.2e-09 68.2 49 65.3
BcaC05g25091 Brassica carinata HOM05D007686 ORTHO05D009709 2.9e-09 67.8 51 62.7
A06p08670 Brassica napus HOM05D002540 ORTHO05D002672 2.9e-09 67.8 51 62.7
BolC5t29774H Brassica oleracea HOM05D007686 ORTHO05D009709 2.9e-09 67.8 51 62.7
BraA06t24064Z Brassica rapa HOM05D007686 ORTHO05D009709 2.9e-09 67.8 51 62.7
C05p10280 Brassica napus HOM05D002540 ORTHO05D002672 3.7e-09 67.4 51 62.7
CARHR013370 Cardamine hirsuta HOM05D007686 ORTHO05D009709 1.1e-08 65.9 51 62.7
C08p15790 Brassica napus HOM05D002540 ORTHO05D002672 1.9e-08 65.1 51 62.7
BolC8t49205H Brassica oleracea HOM05D002540 ORTHO05D002672 1.9e-08 65.1 51 62.7
A08p32500 Brassica napus HOM05D007686 ORTHO05D009709 5.4e-08 63.5 51 62.7
BraA08t35174Z Brassica rapa HOM05D007686 ORTHO05D009709 5.4e-08 63.5 51 62.7
Thhalv10007381m.g Eutrema salsugineum HOM05D007686 ORTHO05D009709 7.0e-08 63.2 51 58.8
Oeu049173.1 Olea europaea HOM05D007686 ORTHO05D009709 1.6e-07 62.0 78 39.7
Oeu056704.1 Olea europaea HOM05D007686 ORTHO05D009709 1.0e-06 59.3 39 74.4
HPP92_012781 Vanilla planifolia HOM05D007686 ORTHO05D009709 1.3e-06 58.9 40 70.0
Ah.10g031010 Amaranthus hybridus HOM05D007686 ORTHO05D009709 8.6e-06 56.2 39 69.2
Peaxi162Scf00207g01213 Petunia axillaris HOM05D007686 ORTHO05D009709 8.6e-06 56.2 39 69.2


User provided reference genes

Program Settings