Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 3.1e-54 214.9 111 100.0
Hma1.2p1_0079F.1_g041000 Hydrangea macrophylla HOM05D007247 ORTHO05D009208 3.0e-25 118.6 101 70.3
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 1.1e-24 116.7 99 72.7
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 1.7e-20 102.8 100 64.0
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 2.9e-20 102.1 99 61.6
Actinidia15099 Actinidia chinensis HOM05D000233 ORTHO05D000020 4.9e-20 101.3 108 62.0
Lj6E813T0 Lonicera japonica HOM05D007247 ORTHO05D009208 4.9e-20 101.3 91 64.8
Oeu001697.1 Olea europaea HOM05D007247 ORTHO05D009208 1.1e-19 100.1 105 61.9
Potri.008G186200 Populus trichocarpa HOM05D007247 ORTHO05D009208 3.2e-19 98.6 104 62.5
QL03p057801 Quercus lobata HOM05D007247 ORTHO05D009208 4.2e-19 98.2 105 59.0
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 4.6e-18 94.7 100 58.0
Sabra10G0021600 Salix brachista HOM05D007247 ORTHO05D009208 1.0e-17 93.6 96 60.4
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 1.3e-17 93.2 92 63.0
Potri.010G046700 Populus trichocarpa HOM05D007247 ORTHO05D009208 1.8e-17 92.8 98 59.2
Ciclev10033189m.g Citrus clementina HOM05D007247 ORTHO05D009208 3.9e-17 91.7 107 56.1
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 3.9e-17 91.7 103 55.3
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 3.9e-17 91.7 103 55.3
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 3.9e-17 91.7 103 55.3
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 1.5e-16 89.7 104 57.7
Rhsim12G0040300 Rhododendron simsii HOM05D007247 ORTHO05D009208 2.5e-16 89.0 85 67.1
COL.COLO4_04829 Corchorus olitorius HOM05D007247 ORTHO05D009208 4.3e-16 88.2 101 55.4
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 5.7e-16 87.8 100 53.0
Cfa009217 Carpinus fangiana HOM05D007247 ORTHO05D009208 7.4e-16 87.4 96 52.1
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 7.4e-16 87.4 95 53.7
Glyma.18G144900 Glycine max HOM05D007247 ORTHO05D009208 1.6e-15 86.3 61 68.9
Manes.12G022500 Manihot esculenta HOM05D007247 ORTHO05D009208 1.6e-15 86.3 92 58.7
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 2.2e-15 85.9 95 55.8
CiPaw.05G181400 Carya illinoinensis HOM05D007247 ORTHO05D009208 3.7e-15 85.1 86 62.8
Psat4g115600 Pisum sativum HOM05D007247 ORTHO05D009208 3.7e-15 85.1 82 54.9
VMungo0251G0750 Vigna mungo HOM05D007247 ORTHO05D009208 3.7e-15 85.1 103 53.4
Actinidia01350 Actinidia chinensis HOM05D000233 ORTHO05D000020 8.2e-15 84.0 91 61.5
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 8.2e-15 84.0 97 52.6
CARHR026490 Cardamine hirsuta HOM05D007247 ORTHO05D009208 1.1e-14 83.6 67 65.7
Lj4g0020020 Lotus japonicus HOM05D007247 ORTHO05D009208 1.1e-14 83.6 90 54.4
HanXRQChr12g0385811 Helianthus annuus HOM05D007247 ORTHO05D009208 1.4e-14 83.2 78 60.3
Medtr8g069350 Medicago truncatula HOM05D007247 ORTHO05D009208 1.8e-14 82.8 90 56.7
Phvul.003G064700 Phaseolus vulgaris HOM05D007247 ORTHO05D009208 1.8e-14 82.8 104 53.8
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 2.4e-14 82.4 92 57.6
Ca_22588_v3 Cicer arietinum L. HOM05D007247 ORTHO05D009208 2.4e-14 82.4 87 52.9
A08p26670 Brassica napus HOM05D007247 ORTHO05D009208 3.1e-14 82.0 75 56.0
DCAR_026511 Daucus carota HOM05D007247 ORTHO05D009208 3.1e-14 82.0 98 56.1
Eucgr.H02494 Eucalyptus grandis HOM05D007247 ORTHO05D009208 3.1e-14 82.0 90 52.2
Cfa009218 Carpinus fangiana HOM05D007247 ORTHO05D009208 4.1e-14 81.6 101 52.5
Actinidia08135 Actinidia chinensis HOM05D007247 ORTHO05D009208 5.3e-14 81.3 80 65.0
BraA08t34615Z Brassica rapa HOM05D007247 ORTHO05D009208 5.3e-14 81.3 75 56.0
C03p73320 Brassica napus HOM05D007247 ORTHO05D009208 6.9e-14 80.9 75 56.0
CSS0032991 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 1.5e-13 79.7 51 84.3
CSS0043579 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 1.5e-13 79.7 51 84.3
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 1.5e-13 79.7 80 55.0
Lsat_1_v5_gn_4_4161 Lactuca sativa HOM05D007247 ORTHO05D009208 1.5e-13 79.7 100 52.0
BcaB03g15384 Brassica carinata HOM05D007247 ORTHO05D009208 4.5e-13 78.2 90 52.2
Glyma.08G281800 Glycine max HOM05D007247 ORTHO05D009208 4.5e-13 78.2 99 49.5
AL1G40330 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 5.9e-13 77.8 74 56.8
BcaC01g01656 Brassica carinata HOM05D007247 ORTHO05D009208 5.9e-13 77.8 75 54.7
BolC3t19629H Brassica oleracea HOM05D007247 ORTHO05D009208 5.9e-13 77.8 75 54.7
Nn4g22599 Nelumbo nucifera HOM05D007247 ORTHO05D009208 5.9e-13 77.8 70 62.9
Sp1g23190 Schrenkiella parvula HOM05D007247 ORTHO05D009208 5.9e-13 77.8 58 67.2
Solyc05g013560.3 Solanum lycopersicum HOM05D007247 ORTHO05D009208 1.0e-12 77.0 97 52.6
Aa31sc790G10 Aethionema arabicum HOM05D007247 ORTHO05D009208 1.3e-12 76.6 95 49.5
BcaB03g12051 Brassica carinata HOM05D007247 ORTHO05D009208 1.3e-12 76.6 82 54.9
BcaC08g46018 Brassica carinata HOM05D007247 ORTHO05D009208 1.3e-12 76.6 96 49.0
A07p32290 Brassica napus HOM05D007247 ORTHO05D009208 1.3e-12 76.6 96 49.0
C06p38130 Brassica napus HOM05D007247 ORTHO05D009208 1.3e-12 76.6 96 49.0
BolC6t38910H Brassica oleracea HOM05D007247 ORTHO05D009208 1.3e-12 76.6 96 49.0
BraA07t30854Z Brassica rapa HOM05D007247 ORTHO05D009208 1.3e-12 76.6 96 49.0
Prupe.1G245600 Prunus persica HOM05D007247 ORTHO05D009208 1.3e-12 76.6 77 58.4
MD13G1100900 Malus domestica HOM05D007247 ORTHO05D009208 1.7e-12 76.3 88 52.3
TPR.G38802 Trifolium pratense HOM05D007247 ORTHO05D009208 1.7e-12 76.3 44 79.5
Thhalv10009220m.g Eutrema salsugineum HOM05D007247 ORTHO05D009208 2.2e-12 75.9 73 54.8
MD16G1101300 Malus domestica HOM05D007247 ORTHO05D009208 3.8e-12 75.1 80 56.2
Medtr5g032790 Medicago truncatula HOM05D007247 ORTHO05D009208 3.8e-12 75.1 44 79.5
AT1G67910 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 6.5e-12 74.3 92 51.1
Peaxi162Scf00128g00216 Petunia axillaris HOM05D007247 ORTHO05D009208 6.5e-12 74.3 96 53.1
Carub.0001s2551 Capsella rubella HOM05D007247 ORTHO05D009208 8.5e-12 73.9 63 55.6
SalBow8G0600 Salvia bowleyana HOM05D007247 ORTHO05D009208 8.5e-12 73.9 91 48.4
Sopen05g008460 Solanum pennellii HOM05D007247 ORTHO05D009208 8.5e-12 73.9 97 50.5
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 1.1e-11 73.6 45 75.6
HanXRQChr17g0569581 Helianthus annuus HOM05D007247 ORTHO05D009208 1.4e-11 73.2 62 62.9
Lalb_Chr09g0326081 Lupinus albus HOM05D007247 ORTHO05D009208 1.4e-11 73.2 77 53.2
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.9e-11 72.8 88 51.1
AL2G26710 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 1.9e-11 72.8 90 47.8
TPR.G17749 Trifolium pratense HOM05D007247 ORTHO05D009208 1.9e-11 72.8 86 54.7
AT1G24577 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 2.5e-11 72.4 72 54.2
TAR622G0973 Trochodendron aralioides HOM05D007247 ORTHO05D009208 2.5e-11 72.4 56 64.3
ECA234G3809 Erigeron canadensis HOM05D007247 ORTHO05D009208 3.2e-11 72.0 73 61.6
unitig_8.g3935 Utricularia gibba HOM05D007247 ORTHO05D009208 4.2e-11 71.6 45 75.6
Sc04g0009510 Simmondsia chinensis HOM05D007247 ORTHO05D009208 5.5e-11 71.2 99 45.5
THA.LOC104825564 Tarenaya hassleriana HOM05D007247 ORTHO05D009208 5.5e-11 71.2 102 46.1
Psat2g084240 Pisum sativum HOM05D007247 ORTHO05D009208 7.2e-11 70.9 109 45.9
Manes.13G023600 Manihot esculenta HOM05D007247 ORTHO05D009208 2.7e-10 68.9 88 52.3
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.0e-09 67.0 83 48.2
EL10Ac6g13820 Beta vulgaris HOM05D007247 ORTHO05D009208 1.8e-09 66.2 84 48.8
AUR62024275 Chenopodium quinoa HOM05D007247 ORTHO05D009208 3.9e-09 65.1 91 48.4
AUR62005467 Chenopodium quinoa HOM05D007247 ORTHO05D009208 5.1e-09 64.7 91 48.4
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 8.8e-09 63.9 86 50.0
FvH4_4g25640 Fragaria vesca HOM05D007247 ORTHO05D009208 1.1e-08 63.5 97 41.2
FAN07G0181 Fragaria x ananassa HOM05D007247 ORTHO05D009208 1.1e-08 63.5 91 42.9
TAR636G3342 Trochodendron aralioides HOM05D007247 ORTHO05D009208 1.1e-08 63.5 66 56.1
FAN12G2765 Fragaria x ananassa HOM05D007247 ORTHO05D009208 1.9e-08 62.8 97 41.2
TAR629G1528 Trochodendron aralioides HOM05D007247 ORTHO05D009208 1.9e-08 62.8 72 52.8
DCAR_024425 Daucus carota HOM05D000669 ORTHO05D000679 3.3e-08 62.0 81 50.6
FAN17G2797 Fragaria x ananassa HOM05D007247 ORTHO05D009208 1.7e-07 59.7 97 40.2
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 1.7e-07 59.7 80 42.5
FAN22G0007 Fragaria x ananassa HOM05D007247 ORTHO05D009208 2.8e-07 58.9 93 39.8
FAN22G1782 Fragaria x ananassa HOM05D007247 ORTHO05D009208 2.8e-07 58.9 93 39.8
TAR636G3092 Trochodendron aralioides HOM05D007247 ORTHO05D009208 6.3e-07 57.8 67 52.2
RcHm_v2.0_Chr4g0433081 Rosa chinensis HOM05D007247 ORTHO05D009208 1.1e-06 57.0 106 39.6
unitig_22.g5530 Utricularia gibba HOM05D007247 ORTHO05D009208 1.1e-06 57.0 63 50.8
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 1.4e-06 56.6 65 47.7
Lsat_1_v5_gn_9_89061 Lactuca sativa HOM05D007247 ORTHO05D009208 2.4e-06 55.8 39 69.2
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 3.1e-06 55.5 72 43.1
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 3.1e-06 55.5 44 56.8
Solyc07g045200.1 Solanum lycopersicum HOM05D006736 ORTHO05D008459 3.1e-06 55.5 39 71.8
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 4.1e-06 55.1 80 41.2
Sed0014616 Sechium edule HOM05D006736 ORTHO05D008459 4.1e-06 55.1 44 61.4
PSO754G0004 Papaver somniferum HOM05D007247 ORTHO05D009208 6.9e-06 54.3 69 52.2
Sc03g0011540 Simmondsia chinensis HOM05D006736 ORTHO05D008459 6.9e-06 54.3 39 59.0
Sopen07g023750 Solanum pennellii HOM05D006736 ORTHO05D008459 6.9e-06 54.3 43 60.5
LjContig00081g0022969 Lotus japonicus HOM05D006736 ORTHO05D008459 9.1e-06 53.9 80 42.5
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 9.1e-06 53.9 56 51.8


User provided reference genes

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