Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14723 Davidia involucrata HOM05D010146 ORTHO05D000385 2.7e-139 498.8 278 100.0
Dinv08948 Davidia involucrata HOM05D010146 ORTHO05D000385 3.2e-124 448.7 278 92.8
Dinv12592 Davidia involucrata HOM05D010146 ORTHO05D000385 1.9e-116 422.9 275 82.2
Dinv04329 Davidia involucrata HOM05D010146 ORTHO05D000385 2.8e-112 409.1 286 80.4
Dinv11732 Davidia involucrata HOM05D010146 ORTHO05D000385 2.8e-112 409.1 286 80.4
Dinv15672 Davidia involucrata HOM05D010146 ORTHO05D000385 1.1e-108 397.1 303 73.9
Dinv01725 Davidia involucrata HOM05D010146 ORTHO05D000385 1.1e-81 307.4 278 64.0
Dinv33582 Davidia involucrata HOM05D010146 ORTHO05D000385 5.7e-73 278.5 164 91.5
Dinv12401 Davidia involucrata HOM05D010146 ORTHO05D000385 7.4e-73 278.1 175 89.7
Dinv06928 Davidia involucrata HOM05D010146 ORTHO05D000385 8.8e-66 254.6 165 83.6
Dinv04171 Davidia involucrata HOM05D010146 ORTHO05D000385 2.5e-65 253.1 210 75.2
Dinv09550 Davidia involucrata HOM05D010146 ORTHO05D000385 2.2e-61 240.0 164 80.5
Dinv10384 Davidia involucrata HOM05D010146 ORTHO05D000385 2.2e-61 240.0 164 80.5
Dinv19999 Davidia involucrata HOM05D010146 ORTHO05D000385 1.2e-54 217.6 176 69.3
Dinv19998 Davidia involucrata HOM05D010146 ORTHO05D000385 3.5e-46 189.5 104 93.3
Dinv04459 Davidia involucrata HOM05D010146 ORTHO05D000385 1.1e-39 167.9 88 97.7
Dinv39436 Davidia involucrata HOM05D010146 ORTHO05D000385 5.3e-39 165.6 89 95.5
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 1.7e-37 160.6 95 84.2
Dinv01947 Davidia involucrata HOM05D010146 ORTHO05D000385 3.6e-35 152.9 86 87.2
Dinv11339 Davidia involucrata HOM05D010146 ORTHO05D000385 9.1e-31 138.3 72 95.8
Dinv03145 Davidia involucrata HOM05D010146 ORTHO05D000385 1.7e-24 117.5 122 56.6
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.1e-19 100.5 307 29.0
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.7e-19 99.4 292 30.8
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.0e-19 98.6 277 30.0
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.0e-19 98.6 308 27.6
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-18 97.1 319 29.5
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.0e-18 96.3 290 30.7
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.2e-18 95.9 285 30.5
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.9e-18 95.1 290 30.7
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.8e-17 92.4 333 27.9
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.5e-17 92.0 278 29.5
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-16 91.3 263 31.6
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.4e-16 89.0 89 50.6
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 6.4e-16 89.0 89 51.7
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.9e-15 87.4 92 51.1
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-15 87.0 262 27.1
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 9.2e-15 85.1 94 46.8
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-14 84.3 268 29.5
vmacro00652 Vaccinium macrocarpon HOM05D001309 ORTHO05D000385 1.6e-14 84.3 95 48.4
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.0e-14 84.0 290 26.6
Dinv38456 Davidia involucrata HOM05D010146 ORTHO05D000385 6.0e-14 82.4 45 91.1
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.3e-13 81.3 94 44.7
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.3e-13 81.3 94 44.7
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.3e-13 81.3 94 44.7
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.7e-13 80.9 89 44.9
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.9e-13 79.7 90 46.7
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 5.0e-13 79.3 94 43.6
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 6.6e-13 79.0 290 26.6
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-12 77.4 83 48.2
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 9.5e-12 75.1 93 41.9
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 2.8e-11 73.6 87 42.5
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 3.6e-11 73.2 95 44.2
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 6.2e-11 72.4 87 42.5
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.2e-11 72.4 87 42.5
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.2e-11 72.4 87 42.5
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-10 70.5 91 41.8
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.1e-10 70.1 88 45.5
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 3.1e-10 70.1 87 41.4
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.1e-10 70.1 86 41.9
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.0e-10 69.7 351 24.5
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 4.0e-10 69.7 89 43.8
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.0e-10 69.7 87 41.4
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 8.9e-10 68.6 88 44.3
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.2e-09 68.2 286 26.2
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 1.5e-09 67.8 87 44.8
Rhsim01G0081500 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.5e-09 67.8 139 36.0
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.5e-09 67.8 87 40.2
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-09 67.4 95 40.0
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 2.6e-09 67.0 304 23.0
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 2.6e-09 67.0 88 43.2
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-09 67.0 95 40.0
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 2.6e-09 67.0 91 42.9
vmacro14094 Vaccinium macrocarpon HOM05D000012 ORTHO05D000978 2.6e-09 67.0 278 24.5
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 3.4e-09 66.6 88 42.0
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 4.4e-09 66.2 95 44.2
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 4.4e-09 66.2 95 41.1
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 4.4e-09 66.2 95 40.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 5.8e-09 65.9 85 44.7
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-09 65.9 92 42.4
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 5.8e-09 65.9 88 42.0
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.5e-09 65.5 298 25.5
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.8e-09 65.1 88 43.2
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.3e-08 64.7 88 45.5
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.7e-08 64.3 91 42.9
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-08 64.3 92 41.3
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 2.2e-08 63.9 300 23.3
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.2e-08 63.9 76 44.7
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.2e-08 63.9 95 38.9
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-08 63.5 177 33.3
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.9e-08 63.5 95 38.9
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.9e-08 63.5 279 28.0
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.9e-08 63.5 279 28.0
MBI09_g23028_MAGBIO Magnolia biondii HOM05D008488 ORTHO05D000385 3.7e-08 63.2 73 42.5
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-08 63.2 95 37.9
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-08 63.2 90 41.1
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-08 63.2 87 39.1
MBI16_g15341_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.9e-08 62.8 202 26.2
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 6.4e-08 62.4 262 24.8
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 8.3e-08 62.0 88 42.0
AUR62035501 Chenopodium quinoa HOM05D008595 ORTHO05D010945 8.3e-08 62.0 89 37.1
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.3e-08 62.0 95 37.9
HanXRQChr09g0254541 Helianthus annuus HOM05D008488 ORTHO05D000385 1.1e-07 61.6 90 38.9
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-07 61.6 90 40.0
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.4e-07 61.2 98 35.7
HanXRQChr03g0084621 Helianthus annuus HOM05D008488 ORTHO05D000385 1.9e-07 60.8 89 39.3
EL10Ac8g18984 Beta vulgaris HOM05D010065 ORTHO05D000385 2.4e-07 60.5 93 35.5
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 2.4e-07 60.5 88 39.8
Nitab4.5_0002263g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-07 60.5 90 41.1
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-07 60.5 90 40.0
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-07 60.5 91 38.5
Rhsim01G0178700 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.4e-07 60.5 87 36.8
RcHm_v2.0_Chr7g0237841 Rosa chinensis HOM05D009706 ORTHO05D009452 2.4e-07 60.5 86 37.2
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.4e-07 60.5 92 39.1
MBI19_g42303_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D006588 3.2e-07 60.1 73 42.5
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-07 60.1 95 36.8
ECA234G0887 Erigeron canadensis HOM05D008488 ORTHO05D000385 5.4e-07 59.3 90 43.3
MBI01_g02357_MAGBIO Magnolia biondii HOM05D008488 ORTHO05D000385 5.4e-07 59.3 71 39.4
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.4e-07 59.3 95 36.8
MBI15_g37113_MAGBIO Magnolia biondii HOM05D000308 ORTHO05D000194 5.4e-07 59.3 72 45.8
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 5.4e-07 59.3 93 36.6
EL10Ac1g01494 Beta vulgaris HOM05D008595 ORTHO05D010945 7.1e-07 58.9 95 33.7
EL10Ac5g11817 Beta vulgaris HOM05D008595 ORTHO05D010945 7.1e-07 58.9 80 36.2
MBI16_g34941_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.1e-07 58.9 93 38.7
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.1e-07 58.9 95 36.8
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.1e-07 58.9 83 41.0
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 7.1e-07 58.9 93 36.6
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 7.1e-07 58.9 93 36.6
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 7.1e-07 58.9 93 36.6
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 7.1e-07 58.9 93 36.6
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 7.1e-07 58.9 93 36.6
ECA327G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 9.2e-07 58.5 280 26.1
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 9.2e-07 58.5 88 37.5
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.2e-07 58.5 83 41.0
Rhsim03G0048100 Rhododendron simsii HOM05D010146 ORTHO05D005886 9.2e-07 58.5 99 35.4
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-06 58.2 284 26.1
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.2e-06 58.2 91 41.8
Sopen12g014810 Solanum pennellii HOM05D008041 ORTHO05D000385 1.2e-06 58.2 93 36.6
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.2e-06 58.2 83 42.2
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.2e-06 58.2 90 36.7
vmacro09403 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.2e-06 58.2 73 42.5
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.1e-06 57.4 103 35.9
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.1e-06 57.4 92 38.0
Sopen08g019920 Solanum pennellii HOM05D008041 ORTHO05D000385 2.1e-06 57.4 93 36.6
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 2.1e-06 57.4 66 47.0
Atru.chr1.767 Acer truncatum HOM05D001309 ORTHO05D000385 2.7e-06 57.0 88 35.2
Atru.chr6.1726 Acer truncatum HOM05D001309 ORTHO05D000385 2.7e-06 57.0 88 35.2
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 2.7e-06 57.0 67 49.3
MBI13_g31587_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.7e-06 57.0 81 38.3
MD02G1315300 Malus domestica HOM05D008315 ORTHO05D009452 2.7e-06 57.0 80 37.5
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 2.7e-06 57.0 93 36.6
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.7e-06 57.0 95 36.8
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-06 56.6 92 38.0
Hund22136 Selenicereus undatus HOM05D001385 ORTHO05D004434 3.5e-06 56.6 86 38.4
MBI19_g12819_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.6e-06 56.2 61 44.3
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.6e-06 56.2 79 43.0
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.0e-06 55.8 301 21.6
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.8e-06 55.5 75 42.7
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 7.8e-06 55.5 88 36.4
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 7.8e-06 55.5 63 42.9


User provided reference genes

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