Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14683 Davidia involucrata HOM05D001245 ORTHO05D004475 8.9e-84 313.5 155 100.0
CSS0038833 Camellia sinensis var. sinensis HOM05D001245 ORTHO05D004475 8.3e-58 227.3 144 78.5
CSS0013013 Camellia sinensis var. sinensis HOM05D001245 ORTHO05D004475 1.4e-57 226.5 144 78.5
Hma1.2p1_0014F.1_g010190 Hydrangea macrophylla HOM05D001245 ORTHO05D004475 2.5e-54 215.7 145 77.9
GSVIVG01008809001 Vitis vinifera HOM05D001245 ORTHO05D004475 5.6e-54 214.5 144 75.7
QL09p032547 Quercus lobata HOM05D001245 ORTHO05D004475 1.8e-52 209.5 145 72.4
Hma1.2p1_1887F.1_g306530 Hydrangea macrophylla HOM05D001245 ORTHO05D004475 3.1e-52 208.8 143 76.2
Cfa018127 Carpinus fangiana HOM05D001245 ORTHO05D004475 4.0e-52 208.4 147 73.5
Actinidia03424 Actinidia chinensis HOM05D001245 ORTHO05D004475 5.2e-52 208.0 147 74.8
Lj4C682G10 Lonicera japonica HOM05D001245 ORTHO05D004475 5.2e-52 208.0 146 74.7
CiPaw.16G022900 Carya illinoinensis HOM05D001245 ORTHO05D004475 5.4e-49 198.0 146 69.9
CANSAT25G1503 Cannabis sativa HOM05D001245 ORTHO05D004475 1.6e-48 196.4 152 67.1
CANSAT80G2764 Cannabis sativa HOM05D001245 ORTHO05D004475 1.7e-47 193.0 148 67.6
Thecc.08G132800 Theobroma cacao HOM05D001245 ORTHO05D004475 5.6e-46 188.0 146 65.8
TWI34G1866 Tripterygium wilfordii HOM05D001245 ORTHO05D004475 7.3e-46 187.6 139 68.3
Potri.005G182500 Populus trichocarpa HOM05D001245 ORTHO05D004475 9.6e-46 187.2 152 63.8
Lj1g0014366 Lotus japonicus HOM05D001245 ORTHO05D004475 2.8e-45 185.7 145 64.1
Manes.02G168200 Manihot esculenta HOM05D001245 ORTHO05D004475 3.6e-45 185.3 146 65.1
Atru.chr13.1560 Acer truncatum HOM05D001245 ORTHO05D004475 1.1e-44 183.7 146 64.4
Duzib093G0162 Durio zibethinus HOM05D001245 ORTHO05D004475 2.4e-44 182.6 147 63.9
Glyma.16G005600 Glycine max HOM05D001245 ORTHO05D004475 2.4e-44 182.6 150 58.7
Psat6g040520 Pisum sativum HOM05D001245 ORTHO05D004475 1.2e-43 180.3 144 59.7
Prupe.1G489800 Prunus persica HOM05D001245 ORTHO05D004475 1.2e-43 180.3 133 66.9
vmacro10605 Vaccinium macrocarpon HOM05D001245 ORTHO05D004475 2.0e-43 179.5 164 60.4
arahy.Tifrunner.gnm1.ann1.69Q1HU Arachis hypogaea HOM05D001245 ORTHO05D004475 2.6e-43 179.1 132 63.6
Sc26g0002960 Simmondsia chinensis HOM05D001245 ORTHO05D004475 2.6e-43 179.1 141 62.4
Sabra05G0138300 Salix brachista HOM05D001245 ORTHO05D004475 4.4e-43 178.3 152 60.5
Cc02_g29380 Coffea canephora HOM05D001245 ORTHO05D004475 5.8e-43 177.9 152 59.2
HanXRQChr02g0040561 Helianthus annuus HOM05D001245 ORTHO05D004475 7.6e-43 177.6 137 67.9
Medtr1g029630 Medicago truncatula HOM05D001245 ORTHO05D004475 1.7e-42 176.4 144 56.9
arahy.Tifrunner.gnm1.ann1.TXAW3L Arachis hypogaea HOM05D001245 ORTHO05D004475 2.2e-42 176.0 132 62.9
MBI06_g35213_MAGBIO Magnolia biondii HOM05D001245 ORTHO05D004475 2.2e-42 176.0 133 67.7
Gorai.013G107700 Gossypium raimondii HOM05D001245 ORTHO05D004475 1.1e-41 173.7 135 65.9
Nn1g08963 Nelumbo nucifera HOM05D001245 ORTHO05D004475 9.3e-41 170.6 139 63.3
Gohir.D03G069003 Gossypium hirsutum HOM05D001245 ORTHO05D004475 1.2e-40 170.2 135 65.2
Gohir.A02G110400 Gossypium hirsutum HOM05D001245 ORTHO05D004475 2.7e-40 169.1 135 64.4
Lalb_Chr17g0343591 Lupinus albus HOM05D001245 ORTHO05D004475 1.0e-39 167.2 142 58.5
ClCG11G015970 Citrullus lanatus HOM05D001245 ORTHO05D004475 1.3e-39 166.8 136 63.2
Phvul.001G070600 Phaseolus vulgaris HOM05D001245 ORTHO05D004475 1.7e-39 166.4 139 57.6
Aqoxy6G00310 Aquilegia oxysepala HOM05D001245 ORTHO05D004475 2.3e-39 166.0 144 60.4
MD08G1159000 Malus domestica HOM05D001245 ORTHO05D004475 2.3e-39 166.0 124 67.7
Solyc01g068260.4 Solanum lycopersicum HOM05D001245 ORTHO05D004475 2.3e-39 166.0 128 65.6
Sopen01g030190 Solanum pennellii HOM05D001245 ORTHO05D004475 2.3e-39 166.0 128 65.6
Hund26774 Selenicereus undatus HOM05D001245 ORTHO05D004475 3.9e-39 165.2 145 61.4
Sed0010713 Sechium edule HOM05D001245 ORTHO05D004475 1.1e-38 163.7 155 56.1
TPR.G30550 Trifolium pratense HOM05D001245 ORTHO05D004475 1.1e-38 163.7 145 55.2
VMungo0647G1057 Vigna mungo HOM05D001245 ORTHO05D004475 1.5e-38 163.3 151 54.3
CAN.G410.39 Capsicum annuum HOM05D001245 ORTHO05D004475 4.3e-38 161.8 139 59.0
Phvul.002G078200 Phaseolus vulgaris HOM05D001245 ORTHO05D004475 7.3e-38 161.0 142 57.0
CsaV3_4G028030 Cucumis sativus L. HOM05D001245 ORTHO05D004475 2.8e-37 159.1 146 56.8
RcHm_v2.0_Chr6g0296681 Rosa chinensis HOM05D001245 ORTHO05D004475 2.4e-36 156.0 132 62.9
Oeu009633.1 Olea europaea HOM05D001245 ORTHO05D004475 4.0e-36 155.2 138 63.0
Eucgr.F03841 Eucalyptus grandis HOM05D001245 ORTHO05D004475 9.0e-36 154.1 125 65.6
PGR042G0290 Punica granatum HOM05D001245 ORTHO05D004475 7.6e-35 151.0 143 57.3
FvH4_2g27821 Fragaria vesca HOM05D001245 ORTHO05D004475 2.2e-34 149.4 131 61.1
Cpa.g.sc64.150 Carica papaya HOM05D001245 ORTHO05D004475 4.9e-34 148.3 145 56.6
ECA233G0473 Erigeron canadensis HOM05D001245 ORTHO05D004475 6.4e-34 147.9 150 56.0
Migut.N01819 Erythranthe guttata HOM05D001245 ORTHO05D004475 1.9e-33 146.4 134 59.0
Peaxi162Scf00087g00021 Petunia axillaris HOM05D001245 ORTHO05D004475 6.0e-32 141.4 174 49.4
Nitab4.5_0001543g0060 Nicotiana tabacum HOM05D001245 ORTHO05D004475 7.9e-32 141.0 140 56.4
Lsat_1_v5_gn_1_6740 Lactuca sativa HOM05D001245 ORTHO05D004475 1.1e-30 137.1 150 57.3
THA.LOC104810225 Tarenaya hassleriana HOM05D001245 ORTHO05D004475 7.4e-30 134.4 133 56.4
THA.LOC104800232 Tarenaya hassleriana HOM05D001245 ORTHO05D004475 2.8e-29 132.5 133 54.9
Nitab4.5_0000316g0190 Nicotiana tabacum HOM05D001245 ORTHO05D004475 4.8e-29 131.7 134 54.5
PSO170G6194 Papaver somniferum HOM05D001245 ORTHO05D004475 1.1e-28 130.6 125 58.4
PSO528G0248 Papaver somniferum HOM05D001245 ORTHO05D004475 1.1e-28 130.6 125 58.4
AT1G77320 Arabidopsis thaliana HOM05D001245 ORTHO05D004475 3.1e-28 129.0 117 61.5
A07p42860 Brassica napus HOM05D001245 ORTHO05D004475 3.1e-28 129.0 118 61.0
AL2G37520 Arabidopsis lyrata HOM05D001245 ORTHO05D004475 2.0e-27 126.3 117 59.8
BcaB04g19399 Brassica carinata HOM05D001245 ORTHO05D004475 2.6e-27 125.9 116 59.5
SGA_v2.0_scaffold354G49742 Striga asiatica HOM05D001245 ORTHO05D004475 5.8e-27 124.8 139 54.0
BolC6t40166H Brassica oleracea HOM05D001245 ORTHO05D004475 1.3e-26 123.6 114 59.6
CDE02G2376 Ceratophyllum demersum HOM05D001245 ORTHO05D004475 1.3e-26 123.6 134 50.7
CARHR070810 Cardamine hirsuta HOM05D001245 ORTHO05D004475 2.2e-26 122.9 117 57.3
BcaC08g47618 Brassica carinata HOM05D001245 ORTHO05D004475 2.9e-26 122.5 114 58.8
C06p51480 Brassica napus HOM05D001245 ORTHO05D004475 2.9e-26 122.5 114 58.8
unitig_21.g20280 Utricularia gibba HOM05D001245 ORTHO05D004475 3.8e-26 122.1 122 56.6
Sp5g32500 Schrenkiella parvula HOM05D001245 ORTHO05D004475 6.5e-26 121.3 118 59.3
BraA07t31807Z Brassica rapa HOM05D001245 ORTHO05D004475 8.4e-26 120.9 139 51.8
MELO3C010511.2 Cucumis melo HOM05D001245 ORTHO05D004475 1.1e-25 120.6 121 50.4
Carub.0002s2420 Capsella rubella HOM05D001245 ORTHO05D004475 1.4e-25 120.2 131 51.9
ATR0561G228 Amborella trichopoda HOM05D001245 ORTHO05D004475 2.1e-24 116.3 129 48.8
COL.COLO4_08845 Corchorus olitorius HOM05D001245 ORTHO05D004475 2.1e-24 116.3 146 50.0
AUR62007718 Chenopodium quinoa HOM05D001245 ORTHO05D004475 1.3e-23 113.6 140 47.1
AUR62013424 Chenopodium quinoa HOM05D001245 ORTHO05D004475 3.0e-23 112.5 145 47.6
FAN24G2504 Fragaria x ananassa HOM05D001245 ORTHO05D005230 3.9e-23 112.1 111 56.8
SalBow6G4599 Salvia bowleyana HOM05D001245 ORTHO05D004475 5.1e-23 111.7 165 44.8
Thhalv10018076m.g Eutrema salsugineum HOM05D001245 ORTHO05D004475 1.1e-22 110.5 117 54.7
Aa31LG4G7350 Aethionema arabicum HOM05D001245 ORTHO05D004475 5.7e-22 108.2 114 52.6
FAN15G0291 Fragaria x ananassa HOM05D001245 ORTHO05D005230 1.3e-21 107.1 133 48.9
HPP92_027721 Vanilla planifolia HOM05D001245 ORTHO05D004475 2.1e-21 106.3 127 46.5
FAN20G0097 Fragaria x ananassa HOM05D001245 ORTHO05D004475 2.8e-21 105.9 109 53.2
Duzib116G0160 Durio zibethinus HOM05D001245 ORTHO05D004475 1.8e-20 103.2 102 54.9
FAN27G0075 Fragaria x ananassa HOM05D001245 ORTHO05D005230 2.6e-19 99.4 109 50.5
Rhsim11G0071500 Rhododendron simsii HOM05D001245 ORTHO05D004475 6.5e-18 94.7 55 83.6
Ciclev10000159m.g Citrus clementina HOM05D001245 ORTHO05D004475 1.4e-17 93.6 89 52.8
TAR229G0002 Trochodendron aralioides HOM05D001245 ORTHO05D004475 3.5e-16 89.0 119 47.1
Zm00001eb091010 Zea mays HOM05D001245 ORTHO05D004475 3.9e-15 85.5 123 45.5
Ah.05g169150 Amaranthus hybridus HOM05D001245 ORTHO05D004475 2.2e-13 79.7 117 44.4
EL10Ac1g01344 Beta vulgaris HOM05D001245 ORTHO05D004475 1.1e-12 77.4 129 41.1
Actinidia29491 Actinidia chinensis HOM05D001245 ORTHO05D004475 1.2e-11 73.9 62 62.9
SHI09213 Sapria himalayana HOM05D001245 ORTHO05D004475 1.7e-10 70.1 82 48.8
BolC2t09478H Brassica oleracea HOM05D001245 ORTHO05D004475 1.2e-08 63.9 55 63.6
C02p34480 Brassica napus HOM05D001245 ORTHO05D004475 4.6e-08 62.0 38 78.9
Ciclev10003608m.g Citrus clementina HOM05D001245 ORTHO05D004475 6.1e-08 61.6 55 60.0
Pp3c3_700 Physcomitrium patens HOM05D001245 ORTHO05D004475 2.3e-07 59.7 117 38.5
SEGI_12378 Sequoiadendron giganteum HOM05D001245 ORTHO05D004475 2.3e-07 59.7 119 31.9
SEGI_38871 Sequoiadendron giganteum HOM05D001245 ORTHO05D004475 2.3e-07 59.7 119 31.9
Mapoly0158s0032 Marchantia polymorpha HOM05D001245 ORTHO05D004475 3.0e-07 59.3 121 38.0
CsaV3_2G000040 Cucumis sativus L. HOM05D001245 ORTHO05D004475 5.1e-07 58.5 65 43.1
CsaV3_UNG169310 Cucumis sativus L. HOM05D001245 ORTHO05D004475 6.7e-07 58.2 65 43.1
CsaV3_UNG178370 Cucumis sativus L. HOM05D001245 ORTHO05D004475 8.8e-07 57.8 64 42.2
CsaV3_UNG082670 Cucumis sativus L. HOM05D018093 ORTHO05D004475 1.1e-06 57.4 41 70.7


User provided reference genes

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