Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 2.1e-82 309.3 191 100.0
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 1.0e-49 200.7 185 76.8
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 1.9e-40 169.9 183 54.6
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 7.4e-40 167.9 197 62.9
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 1.5e-37 160.2 176 52.3
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 1.5e-37 160.2 183 50.3
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 1.3e-36 157.1 177 48.0
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 1.1e-35 154.1 190 48.9
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 4.6e-34 148.7 190 47.9
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 6.1e-34 148.3 188 48.4
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 1.0e-33 147.5 186 49.5
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 1.0e-33 147.5 185 45.9
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 1.4e-33 147.1 187 55.1
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 2.3e-33 146.4 200 49.5
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 8.8e-33 144.4 207 45.9
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 2.8e-31 139.4 195 46.2
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 1.4e-30 137.1 207 46.9
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.8e-30 136.7 188 51.6
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 9.1e-30 134.4 168 56.5
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.5e-29 133.7 188 49.5
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 1.5e-29 133.7 186 43.5
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 3.4e-29 132.5 195 41.5
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 3.4e-29 132.5 188 54.8
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 4.5e-29 132.1 188 52.7
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 5.9e-29 131.7 174 57.5
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 7.7e-29 131.3 197 41.6
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.3e-28 130.6 197 41.6
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 2.2e-28 129.8 167 46.1
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.2e-28 129.8 197 41.6
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.2e-28 129.8 179 42.5
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 3.8e-28 129.0 188 52.1
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 6.5e-28 128.3 183 41.5
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 1.1e-27 127.5 167 46.1
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 1.4e-27 127.1 192 43.8
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 1.4e-27 127.1 173 53.2
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 9.4e-27 124.4 205 40.0
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 7.9e-26 121.3 200 52.0
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 1.4e-25 120.6 167 44.3
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.8e-25 120.2 174 56.3
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 1.8e-25 120.2 167 44.9
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 1.8e-25 120.2 191 41.9
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.3e-25 119.8 173 43.9
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 2.3e-25 119.8 174 55.2
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 3.0e-25 119.4 173 43.4
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 3.9e-25 119.0 185 62.2
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 5.2e-25 118.6 170 44.1
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 5.2e-25 118.6 188 54.3
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 6.7e-25 118.2 153 46.4
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 1.1e-24 117.5 103 62.1
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 7.4e-24 114.8 200 51.5
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 4.8e-23 112.1 189 43.4
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 4.8e-23 112.1 187 41.7
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 8.2e-23 111.3 182 41.8
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 8.2e-23 111.3 201 38.8
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 1.1e-22 110.9 188 39.9
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 2.6e-21 106.3 179 41.3
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 7.7e-21 104.8 166 50.0
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 7.7e-21 104.8 169 41.4
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 1.3e-20 104.0 150 51.3
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.9e-20 102.8 150 52.0
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 4.2e-19 99.0 169 40.8
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 5.5e-19 98.6 176 39.2
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 3.6e-18 95.9 174 38.5
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.4e-17 94.0 169 40.2
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 8.8e-17 91.3 176 50.6
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 2.0e-16 90.1 177 49.2
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 2.0e-16 90.1 168 46.4
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 4.4e-16 89.0 187 36.4
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 7.5e-16 88.2 171 36.8
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 9.7e-16 87.8 173 37.0
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 1.1e-14 84.3 224 32.6
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 4.1e-14 82.4 162 37.0
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 8.5e-12 74.7 221 29.4
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 1.5e-11 73.9 221 34.4
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 4.2e-11 72.4 221 28.5
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 4.2e-11 72.4 232 29.3
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 9.4e-11 71.2 224 29.0
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 9.4e-11 71.2 224 29.0
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 1.2e-10 70.9 224 29.0
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 4.7e-10 68.9 224 28.6
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 6.1e-10 68.6 152 34.9
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 1.4e-09 67.4 228 28.1
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 1.4e-09 67.4 169 38.5
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 1.8e-09 67.0 135 40.7
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 1.8e-09 67.0 161 33.5
PGSC0003DMG401029181 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.3e-09 66.6 68 57.4
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 6.8e-09 65.1 225 27.1
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 6.8e-09 65.1 225 27.6
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 6.8e-09 65.1 219 29.7
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 8.8e-09 64.7 201 29.4
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 8.8e-09 64.7 201 29.4
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 1.5e-08 63.9 218 29.8
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 1.5e-08 63.9 230 27.8
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 3.4e-08 62.8 218 28.9
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 7.5e-08 61.6 207 27.1
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 2.8e-07 59.7 111 38.7
CANSAT25G2745 Cannabis sativa HOM05D007332 ORTHO05D009297 1.1e-06 57.8 180 41.7
Ah.03g139000 Amaranthus hybridus HOM05D007332 ORTHO05D009297 5.4e-06 55.5 183 30.6
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 7.0e-06 55.1 203 28.6


User provided reference genes

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