Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 1.4e-91 339.7 185 100.0
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.7e-44 182.2 110 83.6
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 1.2e-42 177.2 100 91.0
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.7e-41 173.3 109 78.9
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 4.2e-40 168.7 109 79.8
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 1.6e-39 166.8 107 77.6
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 1.6e-39 166.8 109 76.1
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 2.1e-39 166.4 108 79.6
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.7e-39 166.0 109 76.1
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 2.7e-39 166.0 111 77.5
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 3.6e-39 165.6 104 77.9
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 4.6e-39 165.2 108 78.7
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 6.1e-39 164.9 104 78.8
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.0e-38 164.1 101 80.2
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 1.0e-38 164.1 107 75.7
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 1.0e-38 164.1 111 75.7
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 1.4e-38 163.7 107 77.6
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 1.4e-38 163.7 107 76.6
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 1.8e-38 163.3 108 76.9
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 3.0e-38 162.5 106 76.4
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 3.9e-38 162.2 111 75.7
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 3.9e-38 162.2 111 75.7
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 5.1e-38 161.8 107 73.8
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 8.8e-38 161.0 111 71.2
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 1.1e-37 160.6 107 75.7
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 1.5e-37 160.2 108 74.1
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 2.0e-37 159.8 103 77.7
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 2.6e-37 159.5 101 79.2
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 4.4e-37 158.7 108 75.9
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 4.4e-37 158.7 108 75.9
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 5.7e-37 158.3 111 72.1
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 9.7e-37 157.5 113 73.5
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 1.3e-36 157.1 102 73.5
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 1.7e-36 156.8 110 73.6
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 2.2e-36 156.4 145 56.6
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 2.8e-36 156.0 111 71.2
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 2.8e-36 156.0 108 74.1
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 4.8e-36 155.2 107 72.9
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 4.8e-36 155.2 106 70.8
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 4.8e-36 155.2 108 73.1
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 4.8e-36 155.2 101 74.3
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 6.3e-36 154.8 111 71.2
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 8.2e-36 154.5 109 69.7
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 8.2e-36 154.5 110 72.7
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 1.4e-35 153.7 110 73.6
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 2.4e-35 152.9 109 72.5
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 2.4e-35 152.9 101 78.2
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 4.1e-35 152.1 110 70.9
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 6.9e-35 151.4 105 75.2
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 9.1e-35 151.0 107 70.1
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 9.1e-35 151.0 106 68.9
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 9.1e-35 151.0 108 71.3
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 1.2e-34 150.6 108 73.1
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 1.2e-34 150.6 110 70.0
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 1.5e-34 150.2 108 72.2
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.5e-34 150.2 110 70.9
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.5e-34 150.2 110 70.9
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.5e-34 150.2 110 70.9
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 2.0e-34 149.8 108 71.3
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 2.0e-34 149.8 109 72.5
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 2.0e-34 149.8 114 69.3
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.5e-34 148.7 125 64.8
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 4.5e-34 148.7 114 70.2
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 5.9e-34 148.3 108 72.2
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 5.9e-34 148.3 103 75.7
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 1.0e-33 147.5 106 72.6
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 1.0e-33 147.5 108 69.4
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 1.0e-33 147.5 115 70.4
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.3e-33 147.1 108 71.3
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 1.3e-33 147.1 107 69.2
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 1.3e-33 147.1 107 69.2
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 1.7e-33 146.7 104 73.1
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 2.2e-33 146.4 110 70.0
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 2.9e-33 146.0 122 65.6
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 2.9e-33 146.0 97 72.2
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 6.5e-33 144.8 118 66.1
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 8.5e-33 144.4 115 67.0
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 8.5e-33 144.4 115 67.0
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 8.5e-33 144.4 108 69.4
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 8.5e-33 144.4 110 69.1
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.4e-32 143.7 113 67.3
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.4e-32 143.7 113 67.3
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.9e-32 143.3 108 70.4
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 4.2e-32 142.1 101 73.3
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 5.5e-32 141.7 85 82.4
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 9.4e-32 141.0 108 70.4
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 9.4e-32 141.0 108 70.4
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 1.6e-31 140.2 106 70.8
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 2.7e-31 139.4 89 74.2
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 4.7e-31 138.7 114 65.8
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 6.1e-31 138.3 110 65.5
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 6.1e-31 138.3 83 79.5
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 6.1e-31 138.3 81 82.7
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 1.4e-30 137.1 115 65.2
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 3.0e-30 136.0 82 81.7
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 2.4e-27 126.3 114 62.3
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.7e-25 120.2 104 61.5
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 2.5e-24 116.3 110 60.9
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 2.7e-23 112.8 85 67.1
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 1.4e-22 110.5 86 62.8
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 2.0e-21 106.7 85 56.5
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 2.8e-20 102.8 83 63.9
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 4.8e-20 102.1 82 64.6
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 1.1e-19 100.9 85 60.0
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 1.1e-19 100.9 85 60.0
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 1.8e-19 100.1 81 64.2
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 2.4e-19 99.8 84 63.1
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 7.0e-19 98.2 149 40.9
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 1.5e-16 90.5 68 66.2
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 2.5e-16 89.7 115 47.0
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.6e-15 87.0 81 56.8
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 2.7e-15 86.3 90 47.8
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 4.7e-15 85.5 58 70.7
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 6.1e-15 85.1 61 65.6
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 1.4e-14 84.0 75 64.0
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 2.3e-14 83.2 58 69.0
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 8.8e-14 81.3 58 65.5
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 4.4e-13 79.0 78 60.3
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 1.3e-12 77.4 51 64.7
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 1.7e-12 77.0 64 57.8
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 3.7e-12 75.9 85 47.1
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 3.7e-12 75.9 55 63.6
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 5.9e-10 68.6 49 67.3
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 4.7e-07 58.9 46 58.7
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 2.3e-06 56.6 41 63.4
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 3.0e-06 56.2 41 63.4
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 3.0e-06 56.2 41 63.4


User provided reference genes

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