Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 2.7e-202 708.4 344 100.0
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 3.5e-157 558.5 348 77.3
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 2.3e-156 555.8 342 79.2
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 1.1e-155 553.5 339 77.3
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 3.6e-154 548.5 346 75.4
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 6.8e-153 544.3 341 76.5
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.5e-152 543.1 345 77.1
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 4.4e-152 541.6 347 75.5
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 1.7e-151 539.7 346 75.1
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 4.9e-151 538.1 346 72.8
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 1.1e-150 537.0 346 74.9
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 1.4e-150 536.6 341 74.5
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 4.2e-150 535.0 342 74.0
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 5.4e-150 534.6 341 74.8
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 9.3e-150 533.9 340 72.9
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 9.3e-150 533.9 341 73.9
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.1e-149 532.7 342 72.8
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 3.0e-148 528.9 345 74.2
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 1.5e-147 526.6 355 72.7
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.9e-147 526.2 342 72.2
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 3.6e-146 521.9 349 72.8
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 8.1e-146 520.8 339 73.5
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 1.4e-145 520.0 340 72.9
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 2.4e-145 519.2 341 73.6
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 3.1e-145 518.8 341 71.6
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.6e-144 515.8 341 73.0
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 3.4e-144 515.4 341 71.8
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 3.4e-144 515.4 341 72.7
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 5.8e-144 514.6 343 72.0
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 7.6e-144 514.2 342 71.1
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 1.3e-143 513.5 341 68.9
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 2.9e-143 512.3 339 70.8
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 3.8e-143 511.9 348 70.4
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 4.9e-143 511.5 344 69.2
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.1e-142 510.4 341 68.9
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.1e-142 510.4 341 68.6
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 1.9e-142 509.6 342 70.8
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 1.9e-142 509.6 340 70.9
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 9.3e-142 507.3 342 71.6
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 3.5e-141 505.4 336 68.5
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 4.6e-141 505.0 343 69.4
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 7.9e-141 504.2 340 71.5
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.0e-140 503.8 338 70.4
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 1.7e-140 503.1 336 68.2
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 1.7e-140 503.1 337 68.5
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 1.7e-140 503.1 336 67.9
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 3.9e-140 501.9 336 69.6
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 3.9e-140 501.9 343 69.4
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.5e-139 500.0 347 69.7
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 1.9e-139 499.6 336 67.9
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 2.5e-139 499.2 337 69.7
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 3.3e-139 498.8 343 68.8
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 5.6e-139 498.0 340 70.3
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 7.3e-139 497.7 348 68.7
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.3e-138 496.9 344 71.5
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.6e-138 496.5 336 69.9
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.6e-138 496.5 337 68.2
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 2.8e-138 495.7 337 69.4
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 2.8e-138 495.7 345 68.7
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 3.6e-138 495.4 353 66.9
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 3.6e-138 495.4 341 68.9
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 4.8e-138 495.0 337 68.8
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 4.8e-138 495.0 334 68.6
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 1.4e-137 493.4 344 69.5
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 9.0e-137 490.7 339 68.4
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 9.0e-137 490.7 337 70.6
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 1.5e-136 490.0 340 69.7
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 3.4e-136 488.8 340 68.8
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 4.5e-136 488.4 339 68.1
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 5.8e-136 488.0 341 67.4
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.3e-135 486.9 337 68.0
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 1.7e-135 486.5 290 81.7
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.7e-135 486.5 341 67.2
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 3.8e-135 485.3 340 66.2
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 3.8e-135 485.3 342 67.5
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 3.8e-135 485.3 340 67.6
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 2.4e-134 482.6 342 69.3
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 3.2e-134 482.3 346 69.1
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 1.2e-133 480.3 342 67.5
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 6.7e-132 474.6 339 67.0
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 5.6e-131 471.5 341 66.3
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 9.6e-131 470.7 339 66.7
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 2.1e-130 469.5 389 60.2
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.1e-129 467.2 383 60.1
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 1.2e-128 463.8 335 66.6
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.6e-128 462.6 335 66.3
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.5e-128 461.8 335 66.0
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 1.1e-126 457.2 379 60.4
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 1.1e-126 457.2 340 63.8
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.4e-126 456.8 335 65.1
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.1e-126 454.5 335 65.7
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.1e-124 448.4 335 64.2
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 3.3e-123 445.7 340 62.4
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 4.3e-123 445.3 342 62.0
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 4.1e-121 438.7 336 61.9
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 1.5e-120 436.8 343 62.7
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 2.6e-120 436.0 347 59.1
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 3.4e-120 435.6 353 62.6
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 1.0e-116 424.1 336 61.3
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 1.0e-116 424.1 336 59.8
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 6.7e-116 421.4 266 75.9
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 3.7e-114 415.6 437 50.8
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 2.6e-112 409.5 348 61.2
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 6.5e-111 404.8 345 58.3
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 1.4e-110 403.7 336 57.7
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.1e-102 377.5 340 53.5
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 3.7e-98 362.5 259 66.4
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 1.8e-97 360.1 259 66.0
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 7.0e-97 358.2 295 61.7
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 7.5e-91 338.2 183 86.9
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 7.5e-91 338.2 183 86.9
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 3.7e-90 335.9 235 64.7
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 1.5e-78 297.4 342 44.2
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.3e-71 274.2 342 38.9
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.4e-65 254.2 338 40.5
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.0e-64 250.4 206 60.7
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.6e-56 222.6 168 70.8
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.1e-53 213.8 184 61.4
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 8.3e-50 201.8 200 53.5
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 7.1e-49 198.7 262 40.1
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 5.6e-46 189.1 204 50.0
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 7.1e-41 172.2 178 52.2
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.5e-38 164.5 209 45.0
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 1.8e-28 131.0 81 71.6
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 3.6e-21 106.7 130 40.0
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.9e-18 96.3 60 71.7
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.9e-18 96.3 60 71.7
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.9e-18 96.3 60 71.7
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 4.2e-17 93.2 60 70.0
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 4.2e-17 93.2 128 36.7
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 5.6e-14 82.8 53 69.8
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 5.6e-14 82.8 53 69.8
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.6e-13 81.3 92 47.8
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 6.2e-13 79.3 76 53.9
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.4e-12 77.4 76 52.6
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 4.0e-12 76.6 77 51.9
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 4.0e-12 76.6 86 46.5
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 2.6e-11 73.9 60 58.3
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.8e-10 70.1 69 50.7


User provided reference genes

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