Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 1.7e-174 615.9 310 100.0
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 4.2e-85 318.9 300 63.0
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 2.4e-80 303.1 304 62.5
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 6.1e-76 288.5 308 59.1
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 6.7e-75 285.0 316 59.2
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 2.0e-74 283.5 308 57.5
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.8e-72 276.9 309 55.0
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 7.0e-72 275.0 317 55.8
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 5.5e-69 265.4 300 55.3
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 1.4e-67 260.8 311 53.4
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 1.5e-66 257.3 315 49.5
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 3.4e-66 256.1 300 53.7
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 3.7e-65 252.7 301 55.8
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 2.4e-64 250.0 319 51.1
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 3.1e-64 249.6 305 51.8
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 3.1e-64 249.6 318 51.9
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 2.7e-63 246.5 303 49.8
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 2.7e-63 246.5 301 52.8
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 2.7e-63 246.5 316 50.0
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 2.7e-63 246.5 316 50.0
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 4.0e-59 232.6 291 50.9
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 2.6e-58 229.9 295 49.8
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 2.6e-58 229.9 315 47.6
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 9.8e-58 228.0 291 49.8
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 3.7e-57 226.1 291 49.5
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 8.3e-57 224.9 305 48.9
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 9.2e-56 221.5 310 48.1
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.2e-55 221.1 322 46.9
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 2.7e-55 219.9 309 48.5
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 1.3e-54 217.6 234 58.1
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.3e-54 217.6 328 44.5
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 1.3e-54 217.6 304 46.4
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 1.1e-53 214.5 305 48.5
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 1.5e-53 214.2 310 48.7
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 1.5e-53 214.2 311 46.9
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 2.5e-53 213.4 302 45.7
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 4.3e-53 212.6 276 50.4
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 1.2e-52 211.1 305 46.9
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.8e-52 209.9 299 47.5
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 2.8e-52 209.9 305 47.2
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 2.8e-52 209.9 296 50.3
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 4.7e-52 209.1 322 45.0
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 4.7e-52 209.1 311 46.0
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 1.0e-51 208.0 295 48.5
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 2.3e-51 206.8 293 46.4
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 5.2e-51 205.7 306 47.7
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 8.9e-51 204.9 287 46.3
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 3.4e-50 203.0 303 46.9
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 7.5e-50 201.8 290 46.6
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 7.5e-50 201.8 310 44.8
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 2.9e-49 199.9 308 45.8
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 6.4e-49 198.7 303 46.9
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 6.4e-49 198.7 316 47.2
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 6.4e-49 198.7 288 45.8
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 2.4e-48 196.8 310 46.8
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 2.4e-48 196.8 296 45.9
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 9.2e-48 194.9 294 46.3
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 2.7e-47 193.4 302 42.4
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 2.7e-47 193.4 305 45.9
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 3.5e-47 193.0 266 47.4
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 4.6e-47 192.6 308 40.9
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 4.6e-47 192.6 296 41.6
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 1.3e-46 191.0 288 46.2
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 1.7e-46 190.7 305 42.6
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 3.9e-46 189.5 290 41.0
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 5.0e-46 189.1 310 44.2
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 8.6e-46 188.3 293 42.0
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.1e-45 188.0 302 45.0
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 1.5e-45 187.6 316 46.2
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 1.9e-45 187.2 306 41.5
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.3e-45 186.4 218 53.2
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 5.6e-45 185.7 295 46.8
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 9.5e-45 184.9 307 45.0
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 2.1e-44 183.7 290 44.5
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 2.8e-44 183.3 305 40.0
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 3.6e-44 183.0 287 44.6
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 6.2e-44 182.2 300 44.0
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 8.0e-44 181.8 287 41.8
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 1.1e-43 181.4 295 44.7
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 6.8e-43 178.7 308 41.6
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 1.2e-42 177.9 287 41.5
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 3.4e-42 176.4 311 41.5
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 4.4e-42 176.0 291 40.2
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 1.7e-41 174.1 251 46.2
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 2.2e-41 173.7 315 40.0
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.7e-41 172.9 316 44.0
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 4.9e-41 172.6 292 42.1
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 6.4e-41 172.2 289 39.4
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 2.4e-40 170.2 284 42.3
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 4.1e-40 169.5 276 44.6
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 1.6e-39 167.5 297 40.1
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 3.9e-38 162.9 307 41.4
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 1.5e-37 161.0 255 45.5
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 2.5e-37 160.2 300 41.7
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 9.5e-37 158.3 294 37.4
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.2e-36 157.9 290 39.7
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.2e-36 157.9 305 39.0
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 4.7e-36 156.0 311 37.3
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 6.2e-36 155.6 302 40.1
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 6.2e-36 155.6 303 39.9
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 1.1e-35 154.8 306 39.2
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 1.8e-35 154.1 307 39.4
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 3.1e-35 153.3 222 43.7
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 3.1e-35 153.3 294 39.1
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 4.0e-35 152.9 307 39.1
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 1.2e-34 151.4 295 39.0
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 2.6e-34 150.2 307 38.8
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 7.5e-34 148.7 282 38.7
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 9.9e-34 148.3 289 38.1
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.7e-33 147.5 294 38.1
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 2.9e-33 146.7 304 38.2
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 2.9e-33 146.7 298 40.9
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 1.4e-32 144.4 180 51.7
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 4.1e-32 142.9 307 37.8
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 1.2e-31 141.4 295 37.6
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 1.7e-30 137.5 299 38.5
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 3.9e-30 136.3 306 37.3
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 5.1e-30 136.0 300 36.0
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 8.6e-30 135.2 284 36.3
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.9e-29 134.0 285 35.8
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 2.5e-29 133.7 291 35.4
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.3e-29 133.3 181 45.9
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 4.3e-29 132.9 304 37.2
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 5.6e-29 132.5 297 35.4
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 7.3e-29 132.1 299 35.5
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 9.5e-29 131.7 300 35.7
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 9.5e-29 131.7 300 35.7
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 9.5e-29 131.7 300 35.7
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 2.1e-28 130.6 304 35.9
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 2.1e-28 130.6 300 35.3
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 3.6e-28 129.8 306 35.3
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 4.7e-28 129.4 302 35.1
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 6.2e-28 129.0 303 35.6
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 8.1e-28 128.6 285 35.4
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 1.1e-27 128.3 293 34.1
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 1.4e-27 127.9 297 35.4
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 1.4e-27 127.9 293 34.1
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 1.4e-27 127.9 297 37.4
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 1.8e-27 127.5 293 36.5
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 2.4e-27 127.1 303 37.3
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 3.1e-27 126.7 268 39.2
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 4.0e-27 126.3 309 35.6
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 5.2e-27 125.9 285 37.2
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 6.8e-27 125.6 295 33.9
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 6.8e-27 125.6 295 33.9
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 8.9e-27 125.2 306 35.9
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 1.2e-26 124.8 299 34.8
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 1.5e-26 124.4 294 35.0
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 2.6e-26 123.6 300 36.7
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 5.8e-26 122.5 298 36.6
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 5.8e-26 122.5 296 36.5
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 9.9e-26 121.7 293 32.8
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 1.7e-25 120.9 292 32.9
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 1.7e-25 120.9 299 36.5
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 2.2e-25 120.6 287 35.5
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 2.9e-25 120.2 280 35.4
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 4.1e-24 116.3 290 33.4
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 4.1e-24 116.3 179 46.9
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 5.4e-24 115.9 304 35.2
arahy.Tifrunner.gnm1.ann1.85Z4HY Arachis hypogaea HOM05D003715 ORTHO05D003958 2.1e-23 114.0 284 32.0
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 3.5e-23 113.2 302 33.4
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 3.5e-23 113.2 192 43.2
TAR633G2325 Trochodendron aralioides HOM05D003715 ORTHO05D003958 4.6e-23 112.8 155 49.7
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 7.8e-23 112.1 194 42.8
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 1.0e-22 111.7 241 41.1
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 3.0e-22 110.2 296 34.5
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 1.1e-21 108.2 143 46.9
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.9e-21 107.5 308 31.5
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 2.5e-21 107.1 272 35.3
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 4.3e-21 106.3 300 33.0
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 1.1e-19 101.7 277 35.7
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 4.0e-19 99.8 306 30.7
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 6.9e-19 99.0 298 30.9
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 2.2e-17 94.0 88 54.5
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 2.9e-17 93.6 133 45.9
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 8.4e-17 92.0 75 60.0
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 1.1e-16 91.7 168 39.9
unitig_0.g211 Utricularia gibba HOM05D003715 ORTHO05D003958 1.2e-15 88.2 284 27.8
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 2.7e-15 87.0 144 38.2
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 3.3e-13 80.1 299 32.1
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 1.8e-11 74.3 95 41.1
HPP92_014229 Vanilla planifolia HOM05D035551 ORTHO05D003958 1.2e-10 71.6 188 33.5
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 1.7e-09 67.8 99 40.4
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 1.4e-08 64.7 93 39.8
FAN28G1691 Fragaria x ananassa HOM05D003715 ORTHO05D003958 3.0e-06 57.0 146 30.8


User provided reference genes

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