Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 3.0e-159 565.1 279 100.0
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 7.9e-91 337.8 200 78.5
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 4.8e-88 328.6 201 78.6
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 2.6e-86 322.8 264 64.8
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 1.0e-85 320.9 270 61.9
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 2.3e-82 309.7 268 61.2
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 2.8e-80 302.8 256 60.2
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 1.1e-79 300.8 248 61.3
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 5.3e-79 298.5 242 62.0
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 6.9e-79 298.1 260 59.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 6.9e-79 298.1 182 77.5
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 5.9e-78 295.0 262 58.8
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 7.7e-78 294.7 260 57.3
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 6.5e-77 291.6 238 62.2
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 7.2e-76 288.1 225 61.3
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 7.2e-76 288.1 267 56.2
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 2.1e-75 286.6 211 64.0
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 4.6e-75 285.4 275 57.1
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 4.6e-75 285.4 194 68.6
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 7.9e-75 284.6 225 60.4
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.0e-74 284.3 234 63.2
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.0e-74 284.3 250 58.0
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.8e-74 283.5 252 55.6
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 2.3e-74 283.1 175 71.4
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 2.3e-74 283.1 232 60.3
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 3.9e-74 282.3 197 69.0
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.1e-74 282.0 261 58.2
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 5.1e-74 282.0 193 65.8
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 5.1e-74 282.0 237 62.9
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 6.7e-74 281.6 261 57.9
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 6.7e-74 281.6 201 64.2
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.1e-73 280.8 197 69.0
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.1e-73 280.8 197 69.0
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.5e-73 280.4 249 57.8
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.5e-73 280.4 239 61.9
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.0e-73 280.0 194 68.6
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 2.0e-73 280.0 198 67.7
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 3.3e-73 279.3 194 68.6
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 7.4e-73 278.1 272 52.6
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 7.4e-73 278.1 198 64.1
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 7.4e-73 278.1 198 67.7
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 9.7e-73 277.7 248 57.3
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 2.2e-72 276.6 198 67.2
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 3.7e-72 275.8 263 57.4
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 4.8e-72 275.4 280 52.5
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 8.2e-72 274.6 201 66.2
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 1.8e-71 273.5 199 63.8
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 3.1e-71 272.7 237 59.9
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 4.1e-71 272.3 240 55.4
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 4.1e-71 272.3 175 69.1
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 9.1e-71 271.2 244 57.4
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.2e-70 270.8 266 54.9
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 2.0e-70 270.0 199 62.3
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 7.7e-70 268.1 183 65.0
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.3e-69 267.3 267 51.3
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 2.9e-69 266.2 175 69.1
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 2.9e-69 266.2 189 68.3
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.1e-68 264.2 196 58.7
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.4e-68 263.8 192 65.1
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 2.5e-68 263.1 192 64.6
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 3.2e-68 262.7 236 56.8
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 7.2e-68 261.5 196 61.7
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 3.6e-67 259.2 207 61.4
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.0e-66 257.7 182 65.4
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.8e-66 256.9 182 65.9
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 2.3e-66 256.5 204 60.3
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 8.8e-66 254.6 182 64.8
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 8.8e-66 254.6 182 64.8
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 4.8e-64 248.8 247 52.2
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 6.3e-64 248.4 247 52.2
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.3e-61 240.7 202 59.4
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 1.7e-61 240.4 195 59.5
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.1e-60 237.7 186 59.1
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 1.9e-60 236.9 145 74.5
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 2.5e-60 236.5 197 58.9
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.5e-60 236.5 190 58.4
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 2.1e-59 233.4 179 62.0
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.8e-58 230.3 370 39.5
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 8.2e-56 221.5 177 61.0
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 7.0e-55 218.4 191 56.5
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 2.2e-53 213.4 178 57.3
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 6.5e-53 211.8 176 56.8
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.5e-52 210.7 198 53.0
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.4e-50 204.1 171 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 3.0e-50 203.0 177 56.5
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 5.2e-50 202.2 185 60.0
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.0e-42 177.9 125 68.8
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 2.6e-41 173.3 148 51.4
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 1.9e-36 157.1 119 61.3
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 7.3e-36 155.2 118 60.2
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 4.7e-35 152.5 86 76.7
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 5.7e-33 145.6 227 40.5
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 5.0e-29 132.5 119 54.6
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 2.3e-21 107.1 67 73.1
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 1.4e-18 97.8 73 60.3
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 5.8e-17 92.4 114 44.7
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 1.7e-16 90.9 59 66.1
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 2.9e-16 90.1 79 58.2
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.4e-15 87.0 70 54.3


User provided reference genes

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