Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 6.9e-251 870.2 436 100.0
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 3.4e-197 691.8 423 81.1
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.4e-195 686.4 394 85.5
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 2.7e-194 682.2 442 77.4
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 1.0e-193 680.2 416 80.8
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 1.2e-191 673.3 430 77.4
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 5.2e-190 667.9 411 79.3
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 7.5e-189 664.1 389 83.5
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.3e-188 663.3 431 75.4
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 6.0e-186 654.4 394 79.7
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 7.8e-186 654.1 415 78.3
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 1.3e-185 653.3 416 77.9
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 3.9e-185 651.7 405 79.3
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 5.0e-185 651.4 393 80.2
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 2.1e-183 646.0 398 78.4
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 1.1e-182 643.7 410 75.6
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 1.4e-182 643.3 426 76.5
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 2.3e-182 642.5 390 79.7
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 5.2e-182 641.3 413 77.0
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 6.8e-182 641.0 431 75.2
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 3.4e-181 638.6 427 74.7
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 3.7e-180 635.2 444 71.4
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 6.4e-180 634.4 394 77.9
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 3.2e-179 632.1 414 74.4
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 1.2e-178 630.2 389 78.9
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 1.6e-178 629.8 391 77.7
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 2.7e-178 629.0 435 72.0
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 7.8e-178 627.5 411 75.2
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 7.8e-178 627.5 427 73.5
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.7e-177 626.3 438 72.8
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 3.0e-177 625.5 390 77.4
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 3.9e-177 625.2 435 71.7
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 1.1e-176 623.6 387 77.5
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.5e-176 622.5 437 71.6
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 4.3e-176 621.7 422 73.0
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 4.7e-175 618.2 392 78.6
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 4.7e-175 618.2 410 74.4
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 8.1e-175 617.5 387 77.0
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 1.1e-174 617.1 392 77.3
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 1.8e-174 616.3 391 76.5
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 4.0e-174 615.1 398 75.4
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 5.2e-174 614.8 392 75.0
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 5.2e-174 614.8 394 77.7
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 1.7e-172 609.8 392 77.3
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 3.7e-172 608.6 425 70.6
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 4.9e-172 608.2 392 74.7
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.1e-171 607.1 392 74.5
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 2.4e-171 605.9 392 74.7
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 6.0e-170 601.3 473 65.8
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 6.0e-170 601.3 403 74.2
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 7.8e-170 600.9 401 72.3
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 3.0e-169 599.0 452 67.3
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 6.6e-169 597.8 419 70.6
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 2.5e-168 595.9 416 72.4
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 1.6e-167 593.2 433 68.6
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 2.1e-167 592.8 383 75.5
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 1.1e-166 590.5 390 72.6
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.4e-166 590.1 423 70.7
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 1.8e-166 589.7 426 69.7
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 2.4e-166 589.3 441 69.2
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 3.1e-166 589.0 415 71.6
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 5.2e-166 588.2 423 70.4
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 3.4e-165 585.5 431 68.0
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 5.8e-165 584.7 403 71.0
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 7.6e-165 584.3 395 72.4
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 1.4e-163 580.1 410 71.0
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 5.4e-163 578.2 331 84.3
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 9.2e-163 577.4 389 71.5
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 4.6e-162 575.1 434 66.4
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 6.0e-162 574.7 402 71.1
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 5.1e-161 571.6 393 70.5
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 1.1e-160 570.5 418 67.2
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 1.1e-160 570.5 399 70.9
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 1.9e-160 569.7 430 67.4
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 7.3e-160 567.8 434 66.4
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 1.6e-159 566.6 397 71.0
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 1.6e-159 566.6 397 71.0
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 8.1e-159 564.3 472 60.6
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 3.1e-158 562.4 408 68.4
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 4.0e-158 562.0 397 70.5
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 6.6e-153 544.7 388 70.6
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 8.7e-153 544.3 392 68.9
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 8.7e-153 544.3 459 61.2
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 7.3e-152 541.2 395 69.9
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 2.8e-151 539.3 417 66.9
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 5.3e-150 535.0 332 77.4
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 1.3e-148 530.4 334 79.9
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 5.4e-147 525.0 397 67.3
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 4.9e-140 501.9 363 69.4
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.0e-137 494.2 402 63.2
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.5e-136 489.6 336 72.6
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.1e-134 484.2 349 71.1
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 4.9e-132 475.3 328 68.9
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 1.6e-130 470.3 282 79.4
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 1.5e-128 463.8 303 73.3
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 5.3e-126 455.3 393 56.5
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 1.3e-119 434.1 413 52.3
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 4.1e-118 429.1 314 67.8
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 2.1e-114 416.8 310 68.1
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 8.2e-111 404.8 376 54.8
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 3.5e-109 399.4 419 50.4
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 6.5e-108 395.2 241 80.9
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 1.6e-106 390.6 287 66.2
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 3.6e-106 389.4 300 64.7
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 8.0e-106 388.3 385 54.3
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 8.0e-106 388.3 285 67.0
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 7.5e-96 355.1 213 77.9
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 8.5e-92 341.7 241 69.3
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 5.7e-88 328.9 352 52.6
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 2.2e-87 327.0 235 67.7
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 4.9e-87 325.9 474 41.8
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 4.3e-75 286.2 190 73.2
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 9.8e-64 248.4 200 68.0
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 2.1e-61 240.7 148 79.7
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 6.6e-60 235.7 158 73.4
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 2.8e-58 230.3 145 75.2
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 3.1e-57 226.9 189 65.6
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 3.5e-53 213.4 249 46.2
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 4.6e-53 213.0 166 63.9
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 7.3e-51 205.7 428 34.8
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 3.4e-40 170.2 465 28.6
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 4.9e-39 166.4 436 29.6
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.2e-37 161.8 120 67.5
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.3e-36 158.3 419 29.4
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 1.1e-35 155.2 440 29.5
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 4.3e-35 153.3 446 28.3
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 7.6e-32 142.5 235 41.7
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 1.7e-31 141.4 91 73.6
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 7.1e-30 136.0 113 56.6
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 2.8e-26 124.0 82 69.5
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 1.8e-25 121.3 75 73.3
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 2.2e-23 114.4 274 31.0
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 7.1e-22 109.4 107 58.9
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 2.1e-21 107.8 78 75.6
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 7.4e-19 99.4 93 60.2
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 2.2e-15 87.8 53 75.5
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 5.0e-15 86.7 161 39.1
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 1.5e-08 65.1 37 86.5


User provided reference genes

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