Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14515 Davidia involucrata HOM05D008995 ORTHO05D000074 4.8e-146 521.2 268 100.0
Dinv05663 Davidia involucrata HOM05D008995 ORTHO05D000074 5.4e-121 438.0 282 84.8
Dinv14513 Davidia involucrata HOM05D008995 ORTHO05D000074 5.4e-121 438.0 282 84.8
Dinv23118 Davidia involucrata HOM05D008995 ORTHO05D000074 2.0e-46 190.3 302 46.0
Prupe.6G178100 Prunus persica HOM05D008995 ORTHO05D000074 2.7e-40 169.9 290 39.0
CANSAT01G2492 Cannabis sativa HOM05D008995 ORTHO05D000074 3.6e-40 169.5 295 36.6
Lj2g0018976 Lotus japonicus HOM05D008995 ORTHO05D000074 2.6e-38 163.3 290 35.5
MD13G1035900 Malus domestica HOM05D008995 ORTHO05D000074 3.3e-38 162.9 275 37.5
Lalb_Chr17g0338871 Lupinus albus HOM05D008995 ORTHO05D000074 4.4e-38 162.5 293 34.1
Glyma.09G116200 Glycine max HOM05D008995 ORTHO05D000074 9.7e-38 161.4 290 35.2
VMungo1080G0331 Vigna mungo HOM05D008995 ORTHO05D000074 1.1e-36 157.9 292 34.9
FAN16G1355 Fragaria x ananassa HOM05D008995 ORTHO05D000074 1.4e-36 157.5 275 35.3
FAN11G1982 Fragaria x ananassa HOM05D008995 ORTHO05D000074 9.1e-36 154.8 270 35.9
Sed0022040 Sechium edule HOM05D008995 ORTHO05D000074 1.6e-35 154.1 287 35.2
FAN25G1763 Fragaria x ananassa HOM05D008995 ORTHO05D000074 3.5e-35 152.9 275 34.9
FvH4_3g27200 Fragaria vesca HOM05D008995 ORTHO05D000074 7.7e-35 151.8 275 34.9
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 1.3e-34 151.0 294 36.1
MELO3C012271.2 Cucumis melo HOM05D008995 ORTHO05D000074 2.2e-34 150.2 262 36.3
CsaV3_5G034520 Cucumis sativus L. HOM05D008995 ORTHO05D000074 2.2e-34 150.2 262 36.3
Aqoxy7G02804 Aquilegia oxysepala HOM05D008995 ORTHO05D000074 1.4e-28 131.0 308 32.1
COL.COLO4_29554 Corchorus olitorius HOM05D008995 ORTHO05D000074 1.3e-26 124.4 273 33.3
FAN07G1830 Fragaria x ananassa HOM05D008995 ORTHO05D000074 1.3e-26 124.4 264 32.2
VMungo1215G2432 Vigna mungo HOM05D008995 ORTHO05D000074 5.0e-18 95.9 180 35.6
FAN22G1183 Fragaria x ananassa HOM05D008995 ORTHO05D000074 1.5e-17 94.4 123 43.9
FAN12G2620 Fragaria x ananassa HOM05D008995 ORTHO05D000074 3.6e-16 89.7 303 26.1
FAN12G1999 Fragaria x ananassa HOM05D008995 ORTHO05D000074 1.8e-15 87.4 294 26.5
TWI34G1020 Tripterygium wilfordii HOM05D008995 ORTHO05D000074 5.7e-14 82.4 242 32.6
VMungo1215G0294 Vigna mungo HOM05D001502 ORTHO05D002950 1.3e-13 81.3 242 28.9
FvH4_4g26791 Fragaria vesca HOM05D008995 ORTHO05D000074 3.7e-13 79.7 88 47.7
Nn4g24366 Nelumbo nucifera HOM05D008995 ORTHO05D000074 1.8e-12 77.4 235 30.6
Prupe.6G174300 Prunus persica HOM05D008995 ORTHO05D000074 9.2e-12 75.1 75 49.3
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-11 74.7 272 29.4
Aqoxy7G03473 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.5e-11 73.2 272 28.3
Thecc.10G188800 Theobroma cacao HOM05D000151 ORTHO05D000074 3.5e-11 73.2 258 27.9
TAR636G3671 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.8e-11 72.0 274 28.8
Aqoxy7G03491 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.7e-10 70.9 262 27.1
TAR636G0632 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-10 70.1 275 28.4
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-09 68.2 307 26.7
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-09 67.8 296 26.0
TAR636G0534 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.9e-09 67.4 279 26.2
Oeu030066.1 Olea europaea HOM05D000151 ORTHO05D000074 2.5e-09 67.0 259 27.8
Dinv14510 Davidia involucrata HOM05D029348 ORTHO05D008897 5.6e-09 65.9 48 89.6
TAR636G0252 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.6e-09 65.9 265 27.2
Ciclev10006721m.g Citrus clementina HOM05D008995 ORTHO05D000074 9.5e-09 65.1 233 27.5
Nn1g04501 Nelumbo nucifera HOM05D000151 ORTHO05D000074 9.5e-09 65.1 89 43.8
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.5e-09 65.1 287 26.5
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 2.1e-08 63.9 106 37.7
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 2.1e-08 63.9 82 45.1
COL.COLO4_24406 Corchorus olitorius HOM05D000151 ORTHO05D000074 3.6e-08 63.2 274 25.2
Aqoxy3G03018 Aquilegia oxysepala HOM05D007794 ORTHO05D009810 4.7e-08 62.8 102 37.3
Gohir.D10G248775 Gossypium hirsutum HOM05D000151 ORTHO05D000074 4.7e-08 62.8 241 25.7
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 8.0e-08 62.0 99 39.4
TWI74G0260 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.0e-08 62.0 113 38.9
FvH4_4g26310 Fragaria vesca HOM05D000151 ORTHO05D000074 1.0e-07 61.6 88 42.0
FAN12G3235 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.0e-07 61.6 80 43.8
TAR636G1766 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-07 61.6 299 25.8
Aqoxy3G03919 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-07 61.2 99 39.4
Aqoxy6G02931 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-07 61.2 109 34.9
MBI17_g21052_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.4e-07 61.2 91 41.8
TWI31G0931 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.8e-07 60.8 287 24.4
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.8e-07 60.8 268 25.4
Aqoxy3G02149 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.3e-07 60.5 109 34.9
Aqoxy3G03918 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.3e-07 60.5 109 34.9
Haze_14722 Corylus avellana HOM05D000151 ORTHO05D000074 2.3e-07 60.5 94 38.3
TPR.G38135 Trifolium pratense HOM05D000151 ORTHO05D000074 2.3e-07 60.5 117 37.6
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.3e-07 60.5 94 36.2
Atru.chr13.193 Acer truncatum HOM05D000151 ORTHO05D000074 3.1e-07 60.1 89 39.3
Aqoxy3G03847 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.1e-07 60.1 108 37.0
Haze_25744 Corylus avellana HOM05D015779 ORTHO05D000074 3.1e-07 60.1 108 43.5
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.1e-07 60.1 252 26.6
TAR636G1293 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.1e-07 60.1 125 35.2
TAR636G2641 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.1e-07 60.1 113 37.2
Zm00001eb236630 Zea mays HOM05D010462 ORTHO05D012694 3.1e-07 60.1 127 33.1
Gorai.011G289000 Gossypium raimondii HOM05D000151 ORTHO05D000074 4.0e-07 59.7 81 38.3
Thecc.03G275800 Theobroma cacao HOM05D000151 ORTHO05D000074 4.0e-07 59.7 140 32.9
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 5.2e-07 59.3 111 34.2
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.2e-07 59.3 83 42.2
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 6.8e-07 58.9 87 39.1
Hma1.2p1_0091F.1_g046550 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 6.8e-07 58.9 314 26.8
TAR371G0808 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.8e-07 58.9 305 24.9
Atru.chr2.1462 Acer truncatum HOM05D000048 ORTHO05D000436 8.9e-07 58.5 95 35.8
Aqoxy3G02113 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.9e-07 58.5 285 26.3
Aqoxy3G03852 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.9e-07 58.5 115 34.8
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 8.9e-07 58.5 114 35.1
Dinv38965 Davidia involucrata HOM05D000151 ORTHO05D000074 8.9e-07 58.5 90 44.4
Gohir.A10G237000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 8.9e-07 58.5 241 25.7
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 8.9e-07 58.5 104 37.5
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.9e-07 58.5 112 34.8
TAR365G0179 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.9e-07 58.5 142 32.4
Zm00001eb167880 Zea mays HOM05D010462 ORTHO05D012694 8.9e-07 58.5 133 32.3
Aqoxy3G01893 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-06 58.2 83 41.0
COL.COLO4_12589 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.2e-06 58.2 263 25.5
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-06 58.2 118 35.6
TAR365G0814 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-06 58.2 121 35.5
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-06 58.2 101 36.6
Dinv38983 Davidia involucrata HOM05D000151 ORTHO05D000074 1.5e-06 57.8 132 34.8
Cfa003245 Carpinus fangiana HOM05D015779 ORTHO05D000074 2.0e-06 57.4 115 37.4
Cfa003248 Carpinus fangiana HOM05D015779 ORTHO05D000074 2.0e-06 57.4 115 37.4
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 2.0e-06 57.4 89 40.4
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 2.0e-06 57.4 89 36.0
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 2.0e-06 57.4 89 37.1
DCAR_013283 Daucus carota HOM05D000151 ORTHO05D000074 2.6e-06 57.0 91 38.5
Dinv38984 Davidia involucrata HOM05D000151 ORTHO05D000074 2.6e-06 57.0 132 34.8
MBI16_g10273_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D011090 2.6e-06 57.0 84 42.9
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.6e-06 57.0 243 29.2
Manes.18G008400 Manihot esculenta HOM05D000151 ORTHO05D000074 2.6e-06 57.0 121 33.1
Dinv38970 Davidia involucrata HOM05D000151 ORTHO05D000074 3.4e-06 56.6 89 41.6
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.4e-06 56.6 81 43.2
Rhsim07G0073800 Rhododendron simsii HOM05D002241 ORTHO05D002458 3.4e-06 56.6 143 32.2
RcHm_v2.0_Chr4g0433901 Rosa chinensis HOM05D000151 ORTHO05D000074 3.4e-06 56.6 82 37.8
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 4.4e-06 56.2 102 38.2
Duzib084G1040 Durio zibethinus HOM05D000151 ORTHO05D000074 4.4e-06 56.2 80 45.0
FvH4_7g10560 Fragaria vesca HOM05D000151 ORTHO05D000074 4.4e-06 56.2 85 43.5
Gorai.011G286600 Gossypium raimondii HOM05D000151 ORTHO05D000074 4.4e-06 56.2 250 26.4
Psat0s4081g0040 Pisum sativum HOM05D000151 ORTHO05D000074 4.4e-06 56.2 122 36.9
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 4.4e-06 56.2 246 28.0
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 4.4e-06 56.2 104 37.5
Thecc.03G003800 Theobroma cacao HOM05D000151 ORTHO05D000074 4.4e-06 56.2 276 23.9
TAR362G0811 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.4e-06 56.2 266 24.1
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.8e-06 55.8 106 33.0
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 5.8e-06 55.8 90 38.9
FvH4_4g05011 Fragaria vesca HOM05D000151 ORTHO05D000074 5.8e-06 55.8 83 41.0
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.8e-06 55.8 242 27.3
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.8e-06 55.8 237 25.7
Haze_25743 Corylus avellana HOM05D015779 ORTHO05D000074 7.5e-06 55.5 94 44.7
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 7.5e-06 55.5 89 41.6
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.5e-06 55.5 89 38.2
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 7.5e-06 55.5 89 38.2
Aqoxy4G02957 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.8e-06 55.1 81 38.3
MSTRG.6367 Avicennia marina HOM05D000151 ORTHO05D000074 9.8e-06 55.1 260 24.2
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 9.8e-06 55.1 97 38.1
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 9.8e-06 55.1 97 38.1
Dinv03027 Davidia involucrata HOM05D000151 ORTHO05D000074 9.8e-06 55.1 115 33.0
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 9.8e-06 55.1 78 39.7
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 9.8e-06 55.1 84 38.1
QL04p010169 Quercus lobata HOM05D000151 ORTHO05D000074 9.8e-06 55.1 138 31.2


User provided reference genes

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