Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14507 Davidia involucrata HOM05D011585 ORTHO05D005028 4.5e-234 814.3 438 100.0
Dinv44823 Davidia involucrata HOM05D011585 ORTHO05D182646 8.0e-98 361.7 273 77.7
Dinv29922 Davidia involucrata HOM05D011585 ORTHO05D183420 1.2e-88 331.3 298 70.5
Dinv09578 Davidia involucrata HOM05D011585 ORTHO05D180224 2.6e-80 303.5 267 70.8
Dinv02744 Davidia involucrata HOM05D011585 ORTHO05D184487 1.1e-73 281.6 238 75.6
Dinv14509 Davidia involucrata HOM05D004149 ORTHO05D005028 1.4e-73 281.2 142 95.1
Dinv06265 Davidia involucrata HOM05D011585 ORTHO05D182333 4.6e-69 266.2 266 57.5
Dinv13664 Davidia involucrata HOM05D011585 ORTHO05D184654 1.3e-68 264.6 228 75.0
CSS0009567 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 1.7e-68 264.2 142 87.3
Actinidia11575 Actinidia chinensis HOM05D004149 ORTHO05D005028 6.6e-68 262.3 142 87.3
Hma1.2p1_0479F.1_g161390 Hydrangea macrophylla HOM05D004149 ORTHO05D005028 1.5e-67 261.2 142 87.3
GSVIVG01011172001 Vitis vinifera HOM05D004149 ORTHO05D005028 3.3e-67 260.0 140 86.4
CiPaw.09G210500 Carya illinoinensis HOM05D004149 ORTHO05D005028 1.5e-64 251.1 160 76.2
Haze_21017 Corylus avellana HOM05D004149 ORTHO05D005028 2.6e-64 250.4 142 81.0
Rhsim05G0216800 Rhododendron simsii HOM05D004149 ORTHO05D005028 3.4e-64 250.0 153 79.1
QL07p035253 Quercus lobata HOM05D004149 ORTHO05D005028 7.6e-64 248.8 166 72.9
Cfa017194 Carpinus fangiana HOM05D004149 ORTHO05D005028 3.8e-63 246.5 142 78.2
Manes.09G107600 Manihot esculenta HOM05D004149 ORTHO05D005028 4.9e-63 246.1 158 74.1
DCAR_018696 Daucus carota HOM05D004149 ORTHO05D005028 5.4e-62 242.7 143 80.4
Nitab4.5_0000261g0010 Nicotiana tabacum HOM05D004149 ORTHO05D005028 5.4e-62 242.7 142 77.5
TAR633G0450 Trochodendron aralioides HOM05D004149 ORTHO05D005028 5.4e-62 242.7 142 78.2
Nitab4.5_0002020g0030 Nicotiana tabacum HOM05D004149 ORTHO05D005028 7.1e-62 242.3 142 77.5
Aqoxy4G02534 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 2.7e-61 240.4 143 79.0
Lsat_1_v5_gn_5_149460 Lactuca sativa HOM05D004149 ORTHO05D005028 3.5e-61 240.0 168 69.0
Nn2g10866 Nelumbo nucifera HOM05D004149 ORTHO05D005028 4.6e-61 239.6 142 76.8
Sopen09g001490 Solanum pennellii HOM05D004149 ORTHO05D005028 7.8e-61 238.8 142 76.8
PGSC0003DMG400004449 Solanum tuberosum HOM05D004149 ORTHO05D005028 7.8e-61 238.8 142 76.8
Duzib168G0285 Durio zibethinus HOM05D004149 ORTHO05D005028 1.0e-60 238.4 144 76.4
Potri.016G117600 Populus trichocarpa HOM05D004149 ORTHO05D005028 3.0e-60 236.9 165 70.3
Sabra16G0113700 Salix brachista HOM05D004149 ORTHO05D005028 5.1e-60 236.1 165 69.7
Cpa.g.sc112.1 Carica papaya HOM05D004149 ORTHO05D005028 6.6e-60 235.7 142 76.8
Thecc.09G299600 Theobroma cacao HOM05D004149 ORTHO05D005028 8.7e-60 235.3 143 76.2
Cc06_g01230 Coffea canephora HOM05D004149 ORTHO05D005028 2.5e-59 233.8 139 77.0
arahy.Tifrunner.gnm1.ann1.CPEN6V Arachis hypogaea HOM05D004149 ORTHO05D005028 3.3e-59 233.4 154 72.7
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 4.3e-59 233.0 142 76.1
Sed0021100 Sechium edule HOM05D004149 ORTHO05D005028 4.3e-59 233.0 154 72.1
arahy.Tifrunner.gnm1.ann1.JHY1NE Arachis hypogaea HOM05D004149 ORTHO05D005028 7.3e-59 232.3 154 72.7
Lj2C73G10 Lonicera japonica HOM05D004149 ORTHO05D005028 1.6e-58 231.1 156 70.5
MELO3C009158.2 Cucumis melo HOM05D004149 ORTHO05D005028 2.1e-58 230.7 142 76.1
CAN.G740.4 Capsicum annuum HOM05D004149 ORTHO05D005028 2.8e-58 230.3 142 74.6
CsaV3_3G033680 Cucumis sativus L. HOM05D004149 ORTHO05D005028 2.8e-58 230.3 139 77.7
TPR.G34577 Trifolium pratense HOM05D004149 ORTHO05D005028 6.2e-58 229.2 143 74.1
ECA248G2679 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.1e-58 228.8 140 75.7
HanXRQChr13g0406611 Helianthus annuus HOM05D004149 ORTHO05D005028 8.1e-58 228.8 142 76.1
SGA_v2.0_scaffold75G25021 Striga asiatica HOM05D004149 ORTHO05D005028 1.1e-57 228.4 147 70.7
Lj3g0002740 Lotus japonicus HOM05D004149 ORTHO05D005028 1.8e-57 227.6 145 71.7
LjContig00155g0022980 Lotus japonicus HOM05D004149 ORTHO05D005028 1.8e-57 227.6 142 73.2
ClCG10G022210 Citrullus lanatus HOM05D004149 ORTHO05D005028 4.0e-57 226.5 138 78.3
Ciclev10029239m.g Citrus clementina HOM05D004149 ORTHO05D005028 5.3e-57 226.1 141 76.6
Prupe.6G279000 Prunus persica HOM05D004149 ORTHO05D005028 5.3e-57 226.1 171 66.1
Lj3A951T30 Lonicera japonica HOM05D004149 ORTHO05D005028 9.0e-57 225.3 137 80.3
Psat2g057600 Pisum sativum HOM05D004149 ORTHO05D005028 1.2e-56 224.9 146 70.5
Gohir.A09G089600 Gossypium hirsutum HOM05D004149 ORTHO05D005028 1.5e-56 224.6 142 74.6
Gohir.D09G089700 Gossypium hirsutum HOM05D004149 ORTHO05D005028 1.5e-56 224.6 142 74.6
Gorai.006G105900 Gossypium raimondii HOM05D004149 ORTHO05D005028 1.5e-56 224.6 142 74.6
Migut.J00152 Erythranthe guttata HOM05D004149 ORTHO05D005028 2.0e-56 224.2 147 71.4
CiPaw.14G058300 Carya illinoinensis HOM05D004149 ORTHO05D005028 3.4e-56 223.4 139 73.4
Lalb_Chr07g0193651 Lupinus albus HOM05D004149 ORTHO05D005028 3.4e-56 223.4 153 69.3
Medtr5g071240 Medicago truncatula HOM05D004149 ORTHO05D005028 3.4e-56 223.4 144 72.9
QL01p038648 Quercus lobata HOM05D004149 ORTHO05D005028 4.4e-56 223.0 141 74.5
Glyma.03G056500 Glycine max HOM05D004149 ORTHO05D005028 5.8e-56 222.6 161 67.7
MD12G1168700 Malus domestica HOM05D004149 ORTHO05D005028 5.8e-56 222.6 143 72.7
Phvul.010G076100 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 5.8e-56 222.6 142 74.6
Glyma.14G194500 Glycine max HOM05D004149 ORTHO05D005028 7.6e-56 222.2 142 73.2
Lalb_Chr04g0252201 Lupinus albus HOM05D004149 ORTHO05D005028 7.6e-56 222.2 142 73.2
Manes.01G160400 Manihot esculenta HOM05D004149 ORTHO05D005028 9.9e-56 221.9 142 73.9
ATR0681G135 Amborella trichopoda HOM05D004149 ORTHO05D005028 1.7e-55 221.1 144 72.9
TWI31G0142 Tripterygium wilfordii HOM05D004149 ORTHO05D005028 1.7e-55 221.1 142 73.9
arahy.Tifrunner.gnm1.ann1.43A4DE Arachis hypogaea HOM05D004149 ORTHO05D005028 2.9e-55 220.3 134 73.9
arahy.Tifrunner.gnm1.ann1.AG3942 Arachis hypogaea HOM05D004149 ORTHO05D005028 2.9e-55 220.3 134 73.9
Haze_24342 Corylus avellana HOM05D004149 ORTHO05D005028 2.9e-55 220.3 142 71.1
Lalb_Chr10g0103381 Lupinus albus HOM05D004149 ORTHO05D005028 2.9e-55 220.3 142 72.5
Phvul.008G260400 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 3.8e-55 219.9 142 69.7
unitig_578.g15899 Utricularia gibba HOM05D004149 ORTHO05D005028 4.9e-55 219.5 159 63.5
Atru.chr3.4194 Acer truncatum HOM05D004149 ORTHO05D005028 6.4e-55 219.2 150 68.7
Thhalv10010643m.g Eutrema salsugineum HOM05D004149 ORTHO05D005028 6.4e-55 219.2 142 68.3
MD03G1067200 Malus domestica HOM05D004149 ORTHO05D005028 8.4e-55 218.8 142 70.4
Eucgr.B02246 Eucalyptus grandis HOM05D004149 ORTHO05D005028 1.4e-54 218.0 142 67.6
VMungo0647G1724 Vigna mungo HOM05D004149 ORTHO05D005028 1.9e-54 217.6 142 69.7
CARHR272500 Cardamine hirsuta HOM05D004149 ORTHO05D005028 3.2e-54 216.9 142 66.2
Ca_20283_v3 Cicer arietinum L. HOM05D004149 ORTHO05D005028 4.2e-54 216.5 142 71.8
PGR102G2658 Punica granatum HOM05D004149 ORTHO05D005028 4.2e-54 216.5 138 70.3
Potri.009G047000 Populus trichocarpa HOM05D004149 ORTHO05D005028 9.3e-54 215.3 142 70.4
Prupe.6G055700 Prunus persica HOM05D004149 ORTHO05D005028 9.3e-54 215.3 139 70.5
CANSAT54G2318 Cannabis sativa HOM05D004149 ORTHO05D005028 1.6e-53 214.5 142 68.3
Glyma.02G227600 Glycine max HOM05D004149 ORTHO05D005028 1.6e-53 214.5 147 67.3
Sc22g0002520 Simmondsia chinensis HOM05D004149 ORTHO05D005028 1.6e-53 214.5 140 69.3
VMungo0331G2046 Vigna mungo HOM05D004149 ORTHO05D005028 1.6e-53 214.5 152 67.8
AL8G34910 Arabidopsis lyrata HOM05D004149 ORTHO05D005028 2.1e-53 214.2 142 66.2
Carub.0008s1926 Capsella rubella HOM05D004149 ORTHO05D005028 2.1e-53 214.2 142 65.5
Sp6g20340 Schrenkiella parvula HOM05D004149 ORTHO05D005028 2.1e-53 214.2 163 60.7
AT5G58640 Arabidopsis thaliana HOM05D004149 ORTHO05D005028 2.7e-53 213.8 143 67.1
A10p15620 Brassica napus HOM05D004149 ORTHO05D005028 6.0e-53 212.6 141 66.7
BraA10t43671Z Brassica rapa HOM05D004149 ORTHO05D005028 6.0e-53 212.6 141 66.7
Potri.001G253000 Populus trichocarpa HOM05D004149 ORTHO05D005028 7.9e-53 212.2 142 71.1
C03p14190 Brassica napus HOM05D004149 ORTHO05D005028 1.3e-52 211.5 142 65.5
PSO339G1238 Papaver somniferum HOM05D004149 ORTHO05D005028 1.3e-52 211.5 142 73.9
BcaC04g19825 Brassica carinata HOM05D004149 ORTHO05D005028 1.7e-52 211.1 141 65.2
C09p50720 Brassica napus HOM05D004149 ORTHO05D005028 1.7e-52 211.1 141 65.2
BolC3t13864H Brassica oleracea HOM05D004149 ORTHO05D005028 1.7e-52 211.1 142 64.8
MD11G1071900 Malus domestica HOM05D004149 ORTHO05D005028 1.7e-52 211.1 142 68.3
RcHm_v2.0_Chr3g0462841 Rosa chinensis HOM05D004149 ORTHO05D005028 2.3e-52 210.7 142 69.7
BcaB01g04503 Brassica carinata HOM05D004149 ORTHO05D005028 3.0e-52 210.3 142 64.8
AL5G26480 Arabidopsis lyrata HOM05D004149 ORTHO05D005028 5.1e-52 209.5 142 67.6
PSO384G4313 Papaver somniferum HOM05D004149 ORTHO05D005028 5.1e-52 209.5 161 67.1
Ah.12g058720 Amaranthus hybridus HOM05D004149 ORTHO05D005028 6.6e-52 209.1 145 66.9
AT3G47300 Arabidopsis thaliana HOM05D004149 ORTHO05D005028 8.7e-52 208.8 142 67.6
Thhalv10014590m.g Eutrema salsugineum HOM05D004149 ORTHO05D005028 8.7e-52 208.8 166 60.2
Dinv26910 Davidia involucrata HOM05D011585 ORTHO05D181120 1.1e-51 208.4 180 75.0
Psat7g245760 Pisum sativum HOM05D004149 ORTHO05D005028 1.5e-51 208.0 147 68.0
A03p12090 Brassica napus HOM05D004149 ORTHO05D005028 1.9e-51 207.6 142 64.1
BraA03t10521Z Brassica rapa HOM05D004149 ORTHO05D005028 1.9e-51 207.6 142 64.1
Medtr4g015610 Medicago truncatula HOM05D004149 ORTHO05D005028 2.5e-51 207.2 150 68.0
Aa31LG4G16110 Aethionema arabicum HOM05D004149 ORTHO05D005028 3.3e-51 206.8 135 70.4
Cfa011711 Carpinus fangiana HOM05D004149 ORTHO05D005028 3.3e-51 206.8 133 72.2
EL10Ac5g12549 Beta vulgaris HOM05D004149 ORTHO05D005028 4.3e-51 206.5 154 65.6
FAN05G2859 Fragaria x ananassa HOM05D004149 ORTHO05D005028 5.6e-51 206.1 143 69.2
FvH4_6g11300 Fragaria vesca HOM05D004149 ORTHO05D005028 1.3e-50 204.9 143 69.9
FAN14G0231 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.3e-50 204.9 143 69.9
FAN14G3883 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.3e-50 204.9 143 69.9
Hund14286 Selenicereus undatus HOM05D004149 ORTHO05D005028 1.3e-50 204.9 142 69.7
TPR.G13346 Trifolium pratense HOM05D004149 ORTHO05D005028 1.3e-50 204.9 151 65.6
BolC9t57922H Brassica oleracea HOM05D004149 ORTHO05D005028 1.6e-50 204.5 147 62.6
CDE03G0191 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 6.2e-50 202.6 144 67.4
RcHm_v2.0_Chr5g0070001 Rosa chinensis HOM05D004149 ORTHO05D005028 6.2e-50 202.6 141 66.7
Dinv38474 Davidia involucrata HOM05D011585 ORTHO05D179680 1.8e-49 201.1 299 53.5
CDE04G2602 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 6.9e-49 199.1 163 62.0
FAN09G2001 Fragaria x ananassa HOM05D004149 ORTHO05D005028 1.2e-48 198.4 143 67.8
Dinv08853 Davidia involucrata HOM05D011585 ORTHO05D181380 2.6e-48 197.2 279 48.7
FAN16G0525 Fragaria x ananassa HOM05D004149 ORTHO05D005028 3.4e-48 196.8 158 60.8
FvH4_3g38810 Fragaria vesca HOM05D004149 ORTHO05D005028 4.5e-48 196.4 158 60.1
FAN25G1984 Fragaria x ananassa HOM05D004149 ORTHO05D005028 4.5e-48 196.4 141 65.2
Sp5g14550 Schrenkiella parvula HOM05D004149 ORTHO05D005028 4.5e-48 196.4 142 63.4
Zm00001eb351750 Zea mays HOM05D004149 ORTHO05D005028 3.8e-47 193.4 126 70.6
Os05g0467300 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 4.9e-47 193.0 130 68.5
Actinidia29092 Actinidia chinensis HOM05D004149 ORTHO05D005028 1.4e-46 191.4 142 69.0
Zm00001eb368380 Zea mays HOM05D004149 ORTHO05D005028 2.4e-46 190.7 130 67.7
Os01g0832200 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 4.2e-46 189.9 130 68.5
Sabra09G0034400 Salix brachista HOM05D004149 ORTHO05D005028 4.2e-46 189.9 185 51.9
MBI15_g14842_MAGBIO Magnolia biondii HOM05D004149 ORTHO05D005028 7.9e-45 185.7 106 81.1
Dinv03100 Davidia involucrata HOM05D004149 ORTHO05D005028 1.3e-44 184.9 104 83.7
HPP92_017934 Vanilla planifolia HOM05D004149 ORTHO05D005028 2.3e-44 184.1 175 55.4
Peaxi162Scf00170g00124 Petunia axillaris HOM05D004149 ORTHO05D005028 1.1e-43 181.8 109 78.9
SEGI_37457 Sequoiadendron giganteum HOM05D004149 ORTHO05D005028 1.1e-43 181.8 126 64.3
AUR62030494 Chenopodium quinoa HOM05D004149 ORTHO05D005028 2.5e-43 180.6 110 77.3
AUR62030801 Chenopodium quinoa HOM05D004149 ORTHO05D005028 7.4e-43 179.1 115 73.9
CSS0016200 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 3.4e-40 170.2 111 74.8
Ca_05615_v3 Cicer arietinum L. HOM05D004149 ORTHO05D005028 1.7e-39 167.9 104 75.0
SHI31752 Sapria himalayana HOM05D004149 ORTHO05D005028 1.7e-39 167.9 156 55.8
Ciclev10013383m.g Citrus clementina HOM05D004149 ORTHO05D005028 9.3e-38 162.2 113 66.4
SMO358G0328 Selaginella moellendorffii HOM05D004149 ORTHO05D005028 1.2e-37 161.8 124 56.5
FAN11G2604 Fragaria x ananassa HOM05D004149 ORTHO05D005028 7.9e-37 159.1 111 65.8
Dinv06316 Davidia involucrata HOM05D011585 ORTHO05D181940 3.3e-35 153.7 175 65.7
Psat7g245800 Pisum sativum HOM05D004149 ORTHO05D005028 9.6e-35 152.1 101 72.3
FAN21G1905 Fragaria x ananassa HOM05D004149 ORTHO05D005028 2.1e-34 151.0 104 67.3
Carub.0005s1339 Capsella rubella HOM05D004149 ORTHO05D005028 1.2e-32 145.2 101 66.3
Dinv20157 Davidia involucrata HOM05D011585 ORTHO05D180673 1.6e-29 134.8 94 75.5
MD04G1155500 Malus domestica HOM05D004149 ORTHO05D005028 1.4e-25 121.7 115 54.8
vmacro20289 Vaccinium macrocarpon HOM05D004149 ORTHO05D005028 2.0e-24 117.9 110 60.9
Solyc09g005590.3 Solanum lycopersicum HOM05D004149 ORTHO05D005028 2.1e-21 107.8 61 80.3
FAN02G4186 Fragaria x ananassa HOM05D004149 ORTHO05D005028 2.7e-21 107.5 75 70.7
Atru.chr8.2258 Acer truncatum HOM05D004149 ORTHO05D005028 3.3e-19 100.5 62 72.6
MD03G1067500 Malus domestica HOM05D004149 ORTHO05D005028 3.3e-19 100.5 61 80.3
C07p23840 Brassica napus HOM05D004149 ORTHO05D005028 2.4e-17 94.4 77 55.8
Sed0020125 Sechium edule HOM05D004149 ORTHO05D005028 1.4e-14 85.1 136 35.3
Cre14.g616950 Chlamydomonas reinhardtii HOM05D004149 ORTHO05D005028 4.2e-14 83.6 110 34.5
Solyc09g005580.4 Solanum lycopersicum HOM05D004149 ORTHO05D005028 1.0e-12 79.0 47 70.2
Dinv29151 Davidia involucrata HOM05D011585 ORTHO05D181606 1.4e-12 78.6 105 48.6
BcaB01g01543 Brassica carinata HOM05D004149 ORTHO05D039425 3.0e-12 77.4 80 48.8
PRCOL_00001680 Prasinoderma coloniale HOM05D004149 ORTHO05D005028 6.7e-12 76.3 94 38.3
MCO12G475 Micromonas commoda HOM05D004149 ORTHO05D005028 1.5e-11 75.1 111 33.3
Aqoxy2G00865 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 2.0e-11 74.7 152 31.6
BcaC02g09351 Brassica carinata HOM05D004149 ORTHO05D094654 1.1e-09 68.9 69 47.8
CBR_g34707 Chara braunii HOM05D004149 ORTHO05D005028 2.4e-09 67.8 104 32.7
Dinv19097 Davidia involucrata HOM05D011585 ORTHO05D179719 4.5e-08 63.5 28 96.4
BcaB06g29604 Brassica carinata HOM05D004149 ORTHO05D039425 1.5e-06 58.5 56 48.2
GSVIVG01030787001 Vitis vinifera HOM05D004149 ORTHO05D005028 5.5e-06 56.6 41 58.5
Dinv40222 Davidia involucrata HOM05D011585 ORTHO05D181623 9.4e-06 55.8 62 51.6


User provided reference genes

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