Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 9.0e-196 686.8 364 100.0
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 9.1e-180 633.6 365 89.3
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 5.7e-174 614.4 363 86.0
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 8.8e-167 590.5 364 82.1
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 5.7e-166 587.8 364 80.8
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 3.2e-161 572.0 349 84.2
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 5.7e-158 561.2 364 77.7
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 2.2e-157 559.3 404 71.3
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 2.0e-155 552.7 359 80.8
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 9.5e-153 543.9 365 77.0
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 6.8e-151 537.7 416 68.5
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 8.9e-151 537.3 356 75.3
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 1.5e-150 536.6 361 75.9
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 7.5e-150 534.3 361 76.5
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 9.8e-150 533.9 391 70.8
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 1.8e-148 529.6 360 75.8
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 2.4e-148 529.3 381 71.9
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 4.1e-148 528.5 408 67.9
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 5.4e-148 528.1 358 75.4
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 9.2e-148 527.3 410 68.0
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.2e-147 526.9 410 67.8
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 1.2e-147 526.9 357 74.2
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 1.6e-147 526.6 359 74.9
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 1.1e-145 520.4 459 61.4
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 1.5e-145 520.0 367 77.1
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 2.5e-145 519.2 363 73.3
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 3.3e-145 518.8 360 73.6
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 5.6e-145 518.1 359 73.8
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 5.6e-145 518.1 359 74.1
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 7.3e-145 517.7 359 73.8
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 1.2e-144 516.9 362 71.5
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 2.8e-144 515.8 368 72.0
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 8.9e-143 510.8 363 70.8
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 1.2e-142 510.4 362 70.7
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 9.8e-142 507.3 415 65.5
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.7e-141 506.5 361 69.3
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 3.7e-141 505.4 349 74.8
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 3.7e-141 505.4 362 71.5
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 8.3e-141 504.2 363 70.5
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.4e-140 503.4 363 70.2
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.4e-140 503.4 357 71.4
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 1.9e-140 503.1 375 70.1
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 1.9e-140 503.1 407 67.1
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 5.4e-140 501.5 345 73.3
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 9.2e-140 500.7 363 70.0
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 2.0e-139 499.6 362 70.2
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 2.0e-139 499.6 363 70.0
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 2.0e-139 499.6 364 70.1
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 1.3e-138 496.9 396 66.9
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 5.0e-138 495.0 370 69.7
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 1.5e-137 493.4 325 76.6
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 2.5e-137 492.7 363 70.0
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 3.6e-136 488.8 354 70.1
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 6.2e-136 488.0 423 62.9
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 2.3e-135 486.1 358 69.8
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 1.3e-133 480.3 342 70.5
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 2.2e-133 479.6 448 59.8
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 2.7e-131 472.6 357 66.1
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 3.5e-131 472.2 342 69.6
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 3.5e-131 472.2 406 63.1
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 6.0e-131 471.5 403 62.3
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 1.7e-130 469.9 398 63.1
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 5.1e-130 468.4 398 63.1
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 6.6e-130 468.0 385 64.2
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 8.6e-130 467.6 357 70.9
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 1.1e-129 467.2 354 71.8
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 4.3e-129 465.3 394 62.2
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 5.6e-129 464.9 407 61.4
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 7.3e-129 464.5 406 60.6
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 9.5e-129 464.2 412 60.7
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 2.8e-128 462.6 345 67.5
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 2.8e-128 462.6 410 62.4
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 4.7e-128 461.8 374 66.0
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 4.7e-128 461.8 398 64.1
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 1.1e-127 460.7 408 60.8
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 1.1e-127 460.7 406 59.6
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 1.1e-127 460.7 411 60.3
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 1.8e-127 459.9 396 61.9
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 3.1e-127 459.1 351 68.1
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 3.1e-127 459.1 377 64.2
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 5.2e-127 458.4 381 63.3
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 1.5e-126 456.8 399 61.4
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 3.4e-126 455.7 342 68.1
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 5.8e-126 454.9 366 68.6
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 9.9e-126 454.1 400 61.5
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 6.4e-125 451.4 394 60.7
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 6.4e-125 451.4 394 60.7
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 8.3e-125 451.1 310 74.2
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 3.0e-122 442.6 367 68.4
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 3.3e-121 439.1 362 69.1
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 4.7e-120 435.3 356 62.4
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 6.2e-120 434.9 358 62.3
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 6.2e-120 434.9 364 64.8
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 1.4e-119 433.7 354 65.5
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 6.8e-119 431.4 357 68.6
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 3.8e-117 425.6 321 66.0
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.2e-115 420.6 367 60.2
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 3.0e-114 416.0 397 58.2
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.3e-113 412.1 342 68.7
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 2.1e-112 409.8 362 60.2
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.1e-112 409.8 342 68.1
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.1e-112 409.8 342 68.1
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 3.6e-112 409.1 342 68.1
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.4e-111 406.4 342 67.8
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 4.6e-107 392.1 213 91.5
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 6.6e-106 388.3 293 67.2
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 6.6e-106 388.3 293 67.2
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 2.5e-105 386.3 366 60.4
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 1.8e-98 363.6 313 58.8
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 2.2e-93 346.7 364 51.1
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.2e-92 342.4 367 54.5
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 9.6e-89 331.3 270 63.0
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 9.0e-87 324.7 235 69.4
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 3.4e-86 322.8 411 45.0
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 3.0e-82 309.7 214 72.4
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 3.7e-80 302.8 316 50.3
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 2.2e-72 276.9 216 63.4
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 1.3e-61 241.1 255 53.3
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 2.4e-55 220.3 157 72.6
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 3.1e-55 219.9 149 77.9
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 7.0e-55 218.8 150 70.7
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 5.5e-52 209.1 398 35.2
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.1e-43 180.6 136 64.0
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 6.3e-40 169.1 128 68.8
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 5.5e-36 156.0 126 65.9
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.0e-33 147.5 115 65.2
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 3.7e-32 143.3 79 83.5
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.3e-21 108.2 145 45.5
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 2.0e-17 94.4 66 72.7
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 7.8e-14 82.4 73 58.9
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 1.4e-10 71.6 72 51.4
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 1.2e-09 68.6 349 20.9
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 3.4e-09 67.0 50 70.0
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 9.9e-09 65.5 49 71.4
CiPaw.13G018400 Carya illinoinensis HOM05D005841 ORTHO05D007132 3.5e-06 57.0 41 73.2


User provided reference genes

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