Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 5.1e-70 267.7 141 100.0
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 1.5e-42 176.4 136 68.4
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 4.5e-42 174.9 141 68.1
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 5.8e-42 174.5 137 69.3
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 1.0e-41 173.7 135 72.6
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 2.9e-41 172.2 143 70.6
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.2e-39 166.8 135 68.9
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 2.1e-39 166.0 135 68.9
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 7.9e-39 164.1 147 61.2
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.9e-37 159.5 139 62.6
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 4.3e-37 158.3 142 62.0
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 7.4e-37 157.5 138 63.0
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 3.7e-36 155.2 144 63.2
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 4.1e-35 151.8 139 61.9
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 5.3e-35 151.4 140 63.6
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 1.2e-34 150.2 137 59.1
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 1.5e-34 149.8 148 59.5
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 1.5e-34 149.8 148 59.5
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 1.5e-34 149.8 139 62.6
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 2.6e-34 149.1 139 61.2
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.6e-34 149.1 133 63.2
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.6e-34 149.1 133 63.2
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 3.4e-34 148.7 139 61.2
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 7.6e-34 147.5 148 58.8
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 1.3e-33 146.7 140 57.1
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 1.3e-33 146.7 150 56.0
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 1.3e-33 146.7 139 61.9
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 2.9e-33 145.6 146 57.5
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 3.8e-33 145.2 140 57.1
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 3.8e-33 145.2 145 59.3
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 3.8e-33 145.2 144 59.0
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 5.0e-33 144.8 140 60.7
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 6.5e-33 144.4 145 59.3
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 8.5e-33 144.1 149 57.7
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 8.5e-33 144.1 125 64.8
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 1.9e-32 142.9 143 58.7
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 3.2e-32 142.1 139 60.4
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 4.2e-32 141.7 145 53.8
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 8.7e-30 134.0 135 57.8
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 1.1e-29 133.7 138 57.2
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 1.9e-29 132.9 136 56.6
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 3.3e-29 132.1 153 53.6
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 4.3e-29 131.7 143 56.6
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 4.3e-29 131.7 138 56.5
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 5.7e-29 131.3 138 58.0
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 1.3e-28 130.2 145 57.2
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 1.3e-28 130.2 134 59.0
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 1.6e-28 129.8 134 59.0
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 3.7e-28 128.6 140 55.7
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 3.7e-28 128.6 140 55.7
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 3.7e-28 128.6 135 56.3
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 4.8e-28 128.3 139 54.7
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 8.2e-28 127.5 140 55.7
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 8.2e-28 127.5 137 56.2
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 2.4e-27 125.9 142 54.9
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 3.1e-27 125.6 130 57.7
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 6.9e-27 124.4 142 53.5
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 1.5e-26 123.2 140 54.3
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 2.6e-26 122.5 138 55.8
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 4.5e-26 121.7 102 65.7
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 1.0e-25 120.6 138 55.1
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 2.2e-25 119.4 138 52.2
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 5.0e-25 118.2 138 52.2
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 2.5e-24 115.9 138 51.4
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 3.2e-24 115.5 138 52.2
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 4.2e-24 115.2 141 50.4
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 7.2e-24 114.4 140 52.9
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 1.2e-23 113.6 137 52.6
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 1.6e-23 113.2 138 51.4
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 1.8e-22 109.8 139 49.6
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 2.3e-22 109.4 136 50.7
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 3.0e-22 109.0 139 54.0
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 6.7e-22 107.8 137 51.1
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 1.5e-21 106.7 139 50.4
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 2.6e-21 105.9 147 45.6
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 4.4e-21 105.1 137 46.7
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 5.7e-21 104.8 156 47.4
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 5.7e-21 104.8 138 44.2
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 6.3e-20 101.3 137 45.3
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 6.3e-20 101.3 137 45.3
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 8.2e-20 100.9 137 45.3
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 1.1e-19 100.5 142 44.4
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 1.8e-19 99.8 138 47.1
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 2.4e-19 99.4 137 46.0
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 2.4e-19 99.4 137 46.0
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 2.4e-19 99.4 136 45.6
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 2.4e-19 99.4 137 46.0
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 3.1e-19 99.0 141 44.0
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 5.3e-19 98.2 137 45.3
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 3.4e-18 95.5 149 46.3
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 3.4e-18 95.5 145 45.5
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 4.5e-18 95.1 136 41.2
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 5.9e-18 94.7 134 46.3
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 1.3e-17 93.6 137 46.0
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 1.3e-17 93.6 140 41.4
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 8.5e-17 90.9 114 52.6
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 1.1e-16 90.5 164 44.5
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 3.2e-16 89.0 137 41.6
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 6.1e-15 84.7 133 42.1
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 3.9e-14 82.0 96 47.9
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 6.3e-12 74.7 94 46.8
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 1.8e-11 73.2 167 34.7
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 1.8e-11 73.2 133 37.6
ATR0807G086 Amborella trichopoda HOM05D007306 ORTHO05D009112 5.3e-11 71.6 138 38.4
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 1.2e-10 70.5 97 46.4
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 1.6e-10 70.1 162 37.0
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 1.7e-09 66.6 131 40.5
Haze_19991 Corylus avellana HOM05D000267 ORTHO05D000298 1.2e-07 60.5 31 87.1
DCAR_013544 Daucus carota HOM05D002612 ORTHO05D002859 1.2e-07 60.5 117 43.6
CSS0040946 Camellia sinensis var. sinensis HOM05D001162 ORTHO05D043281 3.0e-06 55.8 33 75.8
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 3.0e-06 55.8 150 30.0


User provided reference genes

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