Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14294 Davidia involucrata HOM05D003436 ORTHO05D003674 6.0e-72 274.6 205 100.0
Phvul.001G143100 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 1.3e-26 124.0 207 45.9
Hma1.2p1_0386F.1_g141820 Hydrangea macrophylla HOM05D003436 ORTHO05D003674 1.7e-26 123.6 151 57.0
Glyma.03G144400 Glycine max HOM05D003436 ORTHO05D003674 3.8e-26 122.5 205 46.8
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 5.0e-26 122.1 165 51.5
SGA_v2.0_scaffold105G30485 Striga asiatica HOM05D003436 ORTHO05D003674 6.5e-26 121.7 145 55.9
Peaxi162Scf00258g00520 Petunia axillaris HOM05D003436 ORTHO05D003674 8.5e-26 121.3 202 45.0
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 2.5e-25 119.8 204 44.6
MSTRG.19903 Avicennia marina HOM05D003436 ORTHO05D003674 5.5e-25 118.6 100 72.0
Migut.J01829 Erythranthe guttata HOM05D003436 ORTHO05D003674 5.5e-25 118.6 200 46.0
Nitab4.5_0008334g0020 Nicotiana tabacum HOM05D003436 ORTHO05D003674 9.4e-25 117.9 202 44.6
Glyma.19G147200 Glycine max HOM05D003436 ORTHO05D003674 1.2e-24 117.5 219 42.9
ClCG04G002110 Citrullus lanatus HOM05D003436 ORTHO05D003674 2.1e-24 116.7 163 51.5
MD12G1057800 Malus domestica HOM05D003436 ORTHO05D003674 2.1e-24 116.7 218 45.0
Actinidia22034 Actinidia chinensis HOM05D003436 ORTHO05D003674 4.7e-24 115.5 91 74.7
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 6.1e-24 115.2 156 51.9
VMungo1383G0252 Vigna mungo HOM05D003436 ORTHO05D003674 6.1e-24 115.2 209 43.1
TWI53G0478 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 8.0e-24 114.8 162 51.2
ECA236G0475 Erigeron canadensis HOM05D000402 ORTHO05D000263 1.0e-23 114.4 154 50.0
HanXRQChr05g0132881 Helianthus annuus HOM05D003436 ORTHO05D003674 1.0e-23 114.4 154 51.9
Oeu033740.1 Olea europaea HOM05D003436 ORTHO05D003674 2.3e-23 113.2 199 45.2
Eucgr.K01836 Eucalyptus grandis HOM05D003436 ORTHO05D003674 8.8e-23 111.3 170 48.2
PSO339G4457 Papaver somniferum HOM05D003436 ORTHO05D003674 8.8e-23 111.3 158 54.4
Dinv14293 Davidia involucrata HOM05D003436 ORTHO05D003674 1.5e-22 110.5 206 46.1
Ciclev10012978m.g Citrus clementina HOM05D003436 ORTHO05D003674 2.0e-22 110.2 204 43.6
Nitab4.5_0001538g0030 Nicotiana tabacum HOM05D003436 ORTHO05D003674 3.4e-22 109.4 202 44.6
Sed0015125 Sechium edule HOM05D003436 ORTHO05D003674 1.7e-21 107.1 161 53.4
DCAR_013554 Daucus carota HOM05D003436 ORTHO05D003674 2.2e-21 106.7 112 61.6
CANSAT64G0020 Cannabis sativa HOM05D003436 ORTHO05D003674 2.8e-21 106.3 154 51.3
TWI74G0976 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 2.8e-21 106.3 162 49.4
Ca_08518_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 3.7e-21 105.9 205 42.0
Medtr7g093170 Medicago truncatula HOM05D003436 ORTHO05D003674 3.7e-21 105.9 207 49.8
Prupe.7G076400 Prunus persica HOM05D003436 ORTHO05D003674 3.7e-21 105.9 219 41.6
Aqoxy7G03903 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 6.3e-21 105.1 145 51.0
Potri.016G046350 Populus trichocarpa HOM05D003436 ORTHO05D003674 8.3e-21 104.8 157 46.5
QL07p023622 Quercus lobata HOM05D003436 ORTHO05D003674 8.3e-21 104.8 91 71.4
FAN02G3232 Fragaria x ananassa HOM05D003436 ORTHO05D003674 1.1e-20 104.4 217 41.9
Lj5g0013312 Lotus japonicus HOM05D003436 ORTHO05D003674 3.1e-20 102.8 163 48.5
Nitab4.5_0000324g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 5.4e-20 102.1 200 42.0
Cpa.g.sc85.72 Carica papaya HOM05D003436 ORTHO05D003674 7.0e-20 101.7 196 48.0
Ca_25707_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 7.0e-20 101.7 127 54.3
COL.COLO4_33990 Corchorus olitorius HOM05D011887 ORTHO05D003674 7.0e-20 101.7 156 48.7
Lj1g0001300 Lotus japonicus HOM05D003436 ORTHO05D003674 7.0e-20 101.7 161 47.2
Peaxi162Scf00003g04347 Petunia axillaris HOM05D003436 ORTHO05D003674 7.0e-20 101.7 197 43.1
Psat3g068920 Pisum sativum HOM05D003436 ORTHO05D003674 2.0e-19 100.1 219 44.7
arahy.Tifrunner.gnm1.ann1.BAUA8N Arachis hypogaea HOM05D003436 ORTHO05D003674 2.7e-19 99.8 159 46.5
Nitab4.5_0000105g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.7e-19 99.8 202 42.6
MBI04_g39831_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 3.5e-19 99.4 140 47.9
vmacro07911 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 4.5e-19 99.0 93 65.6
MBI04_g14513_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 1.0e-18 97.8 137 48.2
TPR.G27745 Trifolium pratense HOM05D003436 ORTHO05D003674 1.0e-18 97.8 79 70.9
Phvul.001G142000 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 1.3e-18 97.4 143 47.6
Lalb_Chr15g0078981 Lupinus albus HOM05D003436 ORTHO05D003674 2.3e-18 96.7 81 70.4
Medtr1g053970 Medicago truncatula HOM05D003436 ORTHO05D003674 3.8e-18 95.9 97 61.9
CAN.G1161.31 Capsicum annuum HOM05D003436 ORTHO05D003674 5.0e-18 95.5 99 57.6
Solyc10g078780.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 5.0e-18 95.5 91 61.5
ATR0605G384 Amborella trichopoda HOM05D003436 ORTHO05D003674 6.5e-18 95.1 150 46.7
arahy.Tifrunner.gnm1.ann1.6M6V4C Arachis hypogaea HOM05D003436 ORTHO05D003674 6.5e-18 95.1 160 45.6
Nitab4.5_0002343g0050 Nicotiana tabacum HOM05D003436 ORTHO05D003674 6.5e-18 95.1 148 45.9
Sopen10g029400 Solanum pennellii HOM05D003436 ORTHO05D003674 6.5e-18 95.1 95 58.9
Psat6g120960 Pisum sativum HOM05D003436 ORTHO05D003674 8.6e-18 94.7 114 57.9
Thecc.05G170800 Theobroma cacao HOM05D003436 ORTHO05D003674 8.6e-18 94.7 156 46.2
Medtr7g093140 Medicago truncatula HOM05D003436 ORTHO05D003674 1.1e-17 94.4 100 60.0
Medtr7g093160 Medicago truncatula HOM05D003436 ORTHO05D003674 1.1e-17 94.4 97 60.8
RcHm_v2.0_Chr3g0479771 Rosa chinensis HOM05D003436 ORTHO05D003674 1.1e-17 94.4 203 40.4
Peaxi162Scf00003g04337 Petunia axillaris HOM05D003436 ORTHO05D003674 2.5e-17 93.2 100 58.0
Manes.08G044900 Manihot esculenta HOM05D003436 ORTHO05D003674 3.2e-17 92.8 87 67.8
THA.LOC104826769 Tarenaya hassleriana HOM05D003436 ORTHO05D003674 4.2e-17 92.4 101 57.4
PGSC0003DMG400011439 Solanum tuberosum HOM05D003436 ORTHO05D003674 7.2e-17 91.7 84 63.1
CDE06G2670 Ceratophyllum demersum HOM05D003436 ORTHO05D003674 9.5e-17 91.3 103 59.2
Lalb_Chr04g0261031 Lupinus albus HOM05D003436 ORTHO05D003674 9.5e-17 91.3 99 59.6
Cc06_g15980 Coffea canephora HOM05D003436 ORTHO05D003674 1.2e-16 90.9 96 55.2
C03p03320 Brassica napus HOM05D003436 ORTHO05D003674 1.6e-16 90.5 195 46.7
BolC3t12875H Brassica oleracea HOM05D003436 ORTHO05D003674 1.6e-16 90.5 195 46.7
Rhsim03G0006400 Rhododendron simsii HOM05D003436 ORTHO05D003674 2.1e-16 90.1 139 46.8
TWI77G0090 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 4.7e-16 89.0 90 64.4
arahy.Tifrunner.gnm1.ann1.95S5ZX Arachis hypogaea HOM05D003436 ORTHO05D003674 6.1e-16 88.6 96 59.4
C03p03280 Brassica napus HOM05D003436 ORTHO05D003674 8.0e-16 88.2 208 39.4
HanXRQChr10g0300671 Helianthus annuus HOM05D003436 ORTHO05D003674 1.4e-15 87.4 102 56.9
Nitab4.5_0000105g0110 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.4e-15 87.4 91 60.4
Oeu034263.1 Olea europaea HOM05D008970 ORTHO05D003674 1.4e-15 87.4 142 51.4
Rhsim03G0006300 Rhododendron simsii HOM05D003436 ORTHO05D003674 1.4e-15 87.4 95 61.1
Sabra16G0050300 Salix brachista HOM05D003436 ORTHO05D003674 1.8e-15 87.0 141 45.4
Ah.08g210350 Amaranthus hybridus HOM05D003436 ORTHO05D003674 2.3e-15 86.7 153 45.8
Gohir.D01G178300 Gossypium hirsutum HOM05D003436 ORTHO05D003674 2.3e-15 86.7 160 41.2
Gorai.002G224800 Gossypium raimondii HOM05D003436 ORTHO05D003674 2.3e-15 86.7 160 41.2
vmacro07912 Vaccinium macrocarpon HOM05D003436 ORTHO05D003674 2.3e-15 86.7 93 61.3
Sed0019071 Sechium edule HOM05D003436 ORTHO05D003674 3.0e-15 86.3 89 59.6
arahy.Tifrunner.gnm1.ann1.00VVAL Arachis hypogaea HOM05D003436 ORTHO05D003674 4.0e-15 85.9 96 58.3
A03p02880 Brassica napus HOM05D003436 ORTHO05D003674 4.0e-15 85.9 196 47.4
BraA03t09652Z Brassica rapa HOM05D003436 ORTHO05D003674 4.0e-15 85.9 196 47.4
Atru.chr8.1096 Acer truncatum HOM05D003436 ORTHO05D003674 5.2e-15 85.5 86 58.1
BcaB01g06026 Brassica carinata HOM05D003436 ORTHO05D003674 5.2e-15 85.5 196 45.9
A10p29610 Brassica napus HOM05D003436 ORTHO05D003674 5.2e-15 85.5 196 46.9
BraA10t45003Z Brassica rapa HOM05D003436 ORTHO05D003674 5.2e-15 85.5 196 46.9
Gohir.A01G191700 Gossypium hirsutum HOM05D003436 ORTHO05D003674 5.2e-15 85.5 156 41.7
BcaB01g06022 Brassica carinata HOM05D003436 ORTHO05D003674 6.8e-15 85.1 195 46.2
CsaV3_3G038880 Cucumis sativus L. HOM05D003436 ORTHO05D003674 6.8e-15 85.1 84 58.3
Glyma.09G112100 Glycine max HOM05D003436 ORTHO05D003674 6.8e-15 85.1 80 63.8
C09p69990 Brassica napus HOM05D003436 ORTHO05D003674 8.8e-15 84.7 93 55.9
BolC9t59741H Brassica oleracea HOM05D003436 ORTHO05D003674 8.8e-15 84.7 93 55.9
VMungo0720G0768 Vigna mungo HOM05D003436 ORTHO05D003674 8.8e-15 84.7 80 61.2
SalBow4G2804 Salvia bowleyana HOM05D003436 ORTHO05D003674 1.2e-14 84.3 86 61.6
BcaC06g32544 Brassica carinata HOM05D003436 ORTHO05D003674 1.5e-14 84.0 195 45.1
AUR62015378 Chenopodium quinoa HOM05D003436 ORTHO05D003674 1.5e-14 84.0 134 46.3
FAN14G5712 Fragaria x ananassa HOM05D003436 ORTHO05D003674 1.5e-14 84.0 199 39.7
GSVIVG01033505001 Vitis vinifera HOM05D003436 ORTHO05D003674 1.5e-14 84.0 96 61.5
Psat0s797g0160 Pisum sativum HOM05D003436 ORTHO05D003674 2.0e-14 83.6 85 62.4
AL6G16870 Arabidopsis lyrata HOM05D003436 ORTHO05D003674 2.6e-14 83.2 91 57.1
AT5G06760 Arabidopsis thaliana HOM05D003436 ORTHO05D003674 2.6e-14 83.2 195 44.6
EL10Ac3g06923 Beta vulgaris HOM05D003436 ORTHO05D003674 2.6e-14 83.2 104 56.7
BcaC06g32392 Brassica carinata HOM05D003436 ORTHO05D003674 2.6e-14 83.2 93 54.8
ClCG10G017480 Citrullus lanatus HOM05D003436 ORTHO05D003674 2.6e-14 83.2 84 57.1
Aqoxy6G00181 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 4.4e-14 82.4 123 45.5
BcaB01g06002 Brassica carinata HOM05D003436 ORTHO05D003674 4.4e-14 82.4 194 44.8
FvH4_6g22410 Fragaria vesca HOM05D003436 ORTHO05D003674 4.4e-14 82.4 199 39.2
Psat0s797g0240 Pisum sativum HOM05D003436 ORTHO05D003674 4.4e-14 82.4 97 52.6
PGSC0003DMG400011437 Solanum tuberosum HOM05D003436 ORTHO05D003674 4.4e-14 82.4 88 58.0
Nitab4.5_0008334g0040 Nicotiana tabacum HOM05D003436 ORTHO05D003674 5.7e-14 82.0 104 53.8
Sp6g36090 Schrenkiella parvula HOM05D003436 ORTHO05D003674 5.7e-14 82.0 195 44.6
AUR62012039 Chenopodium quinoa HOM05D003436 ORTHO05D003674 7.5e-14 81.6 100 55.0
ECA236G0537 Erigeron canadensis HOM05D003436 ORTHO05D003674 7.5e-14 81.6 83 62.7
Sc19g0007020 Simmondsia chinensis HOM05D003436 ORTHO05D003674 7.5e-14 81.6 208 36.5
MELO3C009631.2 Cucumis melo HOM05D003436 ORTHO05D003674 1.3e-13 80.9 78 59.0
Thhalv10014897m.g Eutrema salsugineum HOM05D003436 ORTHO05D003674 1.3e-13 80.9 195 45.1
VMungo1383G0066 Vigna mungo HOM05D003436 ORTHO05D003674 1.3e-13 80.9 73 60.3
Dinv24076 Davidia involucrata HOM05D003436 ORTHO05D003674 1.7e-13 80.5 165 43.6
Actinidia32389 Actinidia chinensis HOM05D003436 ORTHO05D003674 2.2e-13 80.1 141 44.7
Nn7g36015 Nelumbo nucifera HOM05D003436 ORTHO05D003674 2.2e-13 80.1 92 56.5
Ca_05483_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 2.8e-13 79.7 101 54.5
CARHR206420 Cardamine hirsuta HOM05D003436 ORTHO05D003674 4.9e-13 79.0 199 43.2
Aqoxy2G03681 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 6.3e-13 78.6 58 72.4
Aqoxy7G02037 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 6.3e-13 78.6 58 72.4
Carub.0006s0565 Capsella rubella HOM05D003436 ORTHO05D003674 6.3e-13 78.6 95 53.7
Sopen10g029380 Solanum pennellii HOM05D003436 ORTHO05D003674 6.3e-13 78.6 89 55.1
CAN.G1161.29 Capsicum annuum HOM05D003436 ORTHO05D003674 8.3e-13 78.2 84 56.0
Solyc10g078760.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 8.3e-13 78.2 89 53.9
DCAR_019788 Daucus carota HOM05D003436 ORTHO05D003674 1.1e-12 77.8 110 51.8
PSO017G1578 Papaver somniferum HOM05D003436 ORTHO05D003674 1.4e-12 77.4 98 55.1
Lsat_1_v5_gn_8_75321 Lactuca sativa HOM05D003436 ORTHO05D003674 2.4e-12 76.6 83 57.8
Sed0013894 Sechium edule HOM05D003436 ORTHO05D003674 2.4e-12 76.6 104 51.0
GSVIVG01033503001 Vitis vinifera HOM05D003436 ORTHO05D003674 2.4e-12 76.6 99 52.5
Sc19g0007030 Simmondsia chinensis HOM05D003436 ORTHO05D003674 3.1e-12 76.3 93 51.6
unitig_899.g15079 Utricularia gibba HOM05D003436 ORTHO05D003674 4.1e-12 75.9 73 58.9
Haze_19983 Corylus avellana HOM05D003436 ORTHO05D003674 7.0e-12 75.1 105 49.5
PSO170G2585 Papaver somniferum HOM05D003436 ORTHO05D003674 9.2e-12 74.7 100 53.0
Lsat_1_v5_gn_9_26540 Lactuca sativa HOM05D003436 ORTHO05D003674 2.0e-11 73.6 93 53.8
Nitab4.5_0000324g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 4.5e-11 72.4 65 60.0
Aqoxy3G02738 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 7.8e-11 71.6 58 69.0
Solyc10g078770.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 7.8e-11 71.6 71 54.9
Sopen10g029390 Solanum pennellii HOM05D003436 ORTHO05D003674 7.8e-11 71.6 71 54.9
CSS0008876 Camellia sinensis var. sinensis HOM05D003436 ORTHO05D003674 1.3e-10 70.9 117 46.2
SalBow1G8531 Salvia bowleyana HOM05D003436 ORTHO05D003674 1.3e-10 70.9 78 56.4
PGSC0003DMG400011438 Solanum tuberosum HOM05D003436 ORTHO05D003674 1.7e-10 70.5 82 51.2
Haze_19981 Corylus avellana HOM05D003436 ORTHO05D003674 3.8e-10 69.3 106 46.2
Nitab4.5_0001538g0010 Nicotiana tabacum HOM05D003436 ORTHO05D003674 5.0e-10 68.9 84 56.0
CAN.G1161.30 Capsicum annuum HOM05D003436 ORTHO05D003674 6.6e-10 68.6 73 53.4
PGR142G2110 Punica granatum HOM05D003436 ORTHO05D003674 8.6e-10 68.2 104 45.2
Actinidia32390 Actinidia chinensis HOM05D003436 ORTHO05D003674 1.1e-09 67.8 79 58.2
unitig_736.g22300 Utricularia gibba HOM05D000267 ORTHO05D000298 1.1e-09 67.8 90 51.1
Nitab4.5_0000105g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.5e-09 67.4 82 56.1
Cfa020171 Carpinus fangiana HOM05D003436 ORTHO05D003674 2.5e-09 66.6 116 44.0
Nitab4.5_0000105g0080 Nicotiana tabacum HOM05D003436 ORTHO05D003674 3.3e-09 66.2 82 56.1
Cfa020173 Carpinus fangiana HOM05D003436 ORTHO05D003674 1.2e-08 64.3 66 60.6
Cc06_g15970 Coffea canephora HOM05D003436 ORTHO05D003674 1.6e-08 63.9 73 56.2
ECA247G3621 Erigeron canadensis HOM05D003436 ORTHO05D003674 4.7e-08 62.4 98 48.0
Oeu007767.1 Olea europaea HOM05D003436 ORTHO05D003674 6.1e-08 62.0 93 49.5
TPR.G27779 Trifolium pratense HOM05D003436 ORTHO05D003674 8.0e-08 61.6 178 35.4
Ah.13g075890 Amaranthus hybridus HOM05D003436 ORTHO05D003674 1.8e-07 60.5 75 53.3
Zm00001eb414650 Zea mays HOM05D003436 ORTHO05D003674 1.8e-07 60.5 89 47.2
Peaxi162Scf00003g04336 Petunia axillaris HOM05D003436 ORTHO05D003674 3.0e-07 59.7 81 50.6
Atru.chr8.1104 Acer truncatum HOM05D003436 ORTHO05D003674 6.8e-07 58.5 104 43.3
Phvul.007G259400 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 6.8e-07 58.5 107 45.8
Cfa020175 Carpinus fangiana HOM05D003436 ORTHO05D003674 1.2e-06 57.8 76 51.3
Nitab4.5_0000105g0090 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.5e-06 57.4 115 42.6
Manes.09G034800 Manihot esculenta HOM05D003436 ORTHO05D003674 2.6e-06 56.6 42 71.4
HanXRQChr02g0048381 Helianthus annuus HOM05D003436 ORTHO05D003674 3.4e-06 56.2 105 42.9


User provided reference genes

Program Settings