Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 0.0e+00 1102.0 513 100.0
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.7e-256 889.0 527 77.0
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 1.1e-255 886.3 514 80.4
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 1.6e-246 855.9 522 76.8
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 4.6e-246 854.4 522 76.8
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 4.0e-242 841.3 515 75.9
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 1.5e-241 839.3 468 82.3
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 2.7e-238 828.6 498 77.7
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.1e-236 823.2 462 80.7
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 2.4e-234 815.5 526 73.0
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 4.0e-234 814.7 477 77.8
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 3.4e-233 811.6 468 77.8
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 5.8e-233 810.8 540 71.1
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 1.0e-232 810.1 570 67.9
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 8.4e-232 807.0 451 81.2
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.9e-231 805.8 461 78.3
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 2.5e-231 805.4 465 78.3
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 3.2e-231 805.1 451 80.3
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 5.5e-231 804.3 501 74.5
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 7.1e-231 803.9 505 73.9
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 4.6e-230 801.2 509 72.1
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 7.9e-230 800.4 505 73.5
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 7.9e-230 800.4 521 72.2
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 1.9e-228 795.8 518 71.4
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 5.7e-228 794.3 442 80.3
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 1.6e-227 792.7 499 73.1
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 1.1e-226 790.0 477 75.7
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 3.1e-226 788.5 465 77.2
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 4.1e-226 788.1 492 75.0
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 9.0e-226 786.9 522 71.3
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 3.4e-225 785.0 425 80.7
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 1.0e-224 783.5 469 75.9
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 1.7e-224 782.7 498 71.9
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 3.8e-224 781.6 439 78.1
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 8.5e-224 780.4 478 74.7
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 8.5e-224 780.4 451 78.0
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 1.4e-223 779.6 448 78.6
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 4.2e-223 778.1 434 80.2
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 5.5e-223 777.7 469 75.5
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 7.2e-223 777.3 497 72.2
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 1.6e-222 776.2 441 78.2
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 2.1e-222 775.8 428 80.1
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 2.1e-222 775.8 439 77.2
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 7.9e-222 773.9 471 76.0
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 7.9e-222 773.9 425 78.4
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 1.0e-221 773.5 482 73.0
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 1.4e-221 773.1 466 75.1
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 2.3e-221 772.3 522 68.8
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 3.9e-221 771.5 468 73.9
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 3.9e-221 771.5 468 75.2
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 8.8e-221 770.4 447 77.9
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.1e-220 770.0 468 75.0
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.3e-220 768.1 468 74.8
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 5.7e-220 767.7 467 74.5
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 5.7e-220 767.7 482 71.8
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 1.3e-219 766.5 430 78.6
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 1.3e-219 766.5 425 79.5
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 3.7e-219 765.0 512 69.5
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 3.7e-219 765.0 468 75.4
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.8e-219 764.6 489 72.6
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 6.3e-219 764.2 467 73.2
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 8.2e-219 763.8 472 74.6
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 1.4e-218 763.1 468 75.2
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 6.9e-218 760.8 432 77.1
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 5.0e-216 754.6 481 71.3
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 5.0e-216 754.6 513 68.0
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 6.5e-216 754.2 428 78.3
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 1.4e-215 753.1 434 76.0
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 2.1e-214 749.2 457 73.7
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 1.0e-213 746.9 434 75.3
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.4e-213 746.5 484 72.7
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 1.4e-213 746.5 430 78.1
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 3.0e-213 745.3 453 74.0
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 6.7e-213 744.2 484 69.8
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 1.5e-212 743.0 456 72.4
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 2.0e-212 742.7 479 72.0
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 1.3e-211 740.0 474 71.5
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 1.7e-211 739.6 474 70.5
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 3.7e-211 738.4 463 70.6
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 1.4e-210 736.5 441 74.1
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 3.1e-210 735.3 475 71.4
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 3.1e-210 735.3 475 71.4
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 1.5e-209 733.0 443 72.7
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 4.5e-209 731.5 470 71.3
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 6.5e-208 727.6 486 68.7
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.2e-207 725.3 470 68.3
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 7.2e-207 724.2 475 68.8
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 1.2e-206 723.4 458 74.5
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 2.1e-206 722.6 576 61.8
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 2.0e-204 716.1 485 69.5
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 1.3e-203 713.4 429 73.7
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 5.3e-202 708.0 427 72.8
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 3.5e-201 705.3 506 67.0
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 2.1e-198 696.0 410 76.8
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.8e-195 684.9 455 65.5
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 1.7e-192 676.4 380 78.4
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 1.7e-192 676.4 380 78.4
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 1.9e-191 672.9 378 79.9
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 2.3e-189 666.0 427 70.7
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 8.3e-187 657.5 440 69.3
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 5.4e-186 654.8 517 62.1
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 1.3e-184 650.2 380 76.8
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 2.1e-182 642.9 358 80.2
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 6.8e-181 637.9 443 67.3
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 2.2e-179 632.9 408 73.0
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 3.5e-177 625.5 325 84.0
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 2.9e-176 622.5 370 75.9
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 2.5e-175 619.4 430 67.9
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 7.3e-175 617.8 518 58.7
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 2.1e-174 616.3 440 65.2
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 5.4e-170 601.7 417 63.8
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 6.2e-166 588.2 441 60.3
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 6.4e-163 578.2 463 59.2
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 5.4e-154 548.5 431 62.2
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 2.1e-150 536.6 461 54.7
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 7.6e-148 528.1 321 72.0
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 1.4e-146 523.9 396 57.8
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 3.8e-139 499.2 266 81.6
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.3e-136 490.7 259 83.4
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 2.8e-134 483.0 418 54.3
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 2.5e-111 406.8 218 82.1
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 4.3e-103 379.4 455 42.6
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.6e-92 343.6 184 83.7
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 3.6e-81 306.6 162 84.6
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 6.8e-80 302.4 228 65.4
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 6.1e-73 279.3 148 83.1
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 8.8e-72 275.4 422 39.6
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 9.5e-66 255.4 387 38.5
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 2.3e-56 224.2 182 61.5
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.5e-55 221.5 110 82.7
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 6.6e-51 206.1 118 78.8
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.1e-50 205.3 148 59.5
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 2.1e-44 184.5 109 76.1
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 2.3e-40 171.0 185 49.7
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 5.2e-40 169.9 103 71.8
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 1.5e-34 151.8 186 44.1
Dinv08074 Davidia involucrata HOM05D005302 ORTHO05D184631 2.2e-30 137.9 105 70.5
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 4.3e-18 97.1 60 68.3
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.8e-17 93.6 61 62.3
CDE02G1858 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.3e-11 74.7 191 34.6
BcaC09g52073 Brassica carinata HOM05D002602 ORTHO05D002661 1.1e-08 65.9 41 70.7


User provided reference genes

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