Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14224 Davidia involucrata HOM05D008234 ORTHO05D010422 9.1e-240 833.2 425 100.0
Actinidia31219 Actinidia chinensis HOM05D008234 ORTHO05D010422 1.3e-148 530.4 396 67.7
Hma1.2p1_1255F.1_g270650 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 7.4e-133 478.0 333 72.4
Prupe.1G453000 Prunus persica HOM05D008234 ORTHO05D010422 2.4e-131 473.0 426 59.6
Lj7P707T11 Lonicera japonica HOM05D008234 ORTHO05D010422 9.4e-128 461.1 330 69.4
TAR626G1903 Trochodendron aralioides HOM05D008234 ORTHO05D010422 3.7e-124 449.1 425 57.9
Lj1g0008618 Lotus japonicus HOM05D008234 ORTHO05D010422 2.4e-123 446.4 424 56.6
TWI34G1157 Tripterygium wilfordii HOM05D008234 ORTHO05D010422 1.0e-121 441.0 384 59.4
MSTRG.25893 Avicennia marina HOM05D008234 ORTHO05D010422 9.8e-117 424.5 399 57.1
QL12p026340 Quercus lobata HOM05D008234 ORTHO05D010422 2.8e-116 422.9 431 55.2
Ah.16g105160 Amaranthus hybridus HOM05D008234 ORTHO05D010422 1.2e-114 417.5 420 53.6
CiPaw.08G023300 Carya illinoinensis HOM05D008234 ORTHO05D010422 1.2e-114 417.5 393 57.0
Migut.A00244 Erythranthe guttata HOM05D008234 ORTHO05D010422 2.0e-114 416.8 392 56.1
Lsat_1_v5_gn_6_11021 Lactuca sativa HOM05D008234 ORTHO05D010422 2.7e-114 416.4 374 57.2
TPR.G12012 Trifolium pratense HOM05D008234 ORTHO05D010422 7.7e-114 414.8 428 54.9
SGA_v2.0_scaffold185G40113 Striga asiatica HOM05D008234 ORTHO05D010422 1.1e-112 411.0 390 53.1
RcHm_v2.0_Chr6g0305711 Rosa chinensis HOM05D008234 ORTHO05D010422 1.5e-112 410.6 426 54.9
Ca_12814_v3 Cicer arietinum L. HOM05D008234 ORTHO05D010422 1.9e-112 410.2 390 56.2
Aqoxy7G03839 Aquilegia oxysepala HOM05D008234 ORTHO05D010422 4.2e-112 409.1 391 53.7
GSVIVG01035674001 Vitis vinifera HOM05D008234 ORTHO05D010422 1.2e-111 407.5 423 55.3
HanXRQChr02g0048071 Helianthus annuus HOM05D008234 ORTHO05D010422 6.1e-111 405.2 419 51.8
Sabra06G0190100 Salix brachista HOM05D008234 ORTHO05D010422 4.4e-109 399.1 426 53.1
Cc08_g08970 Coffea canephora HOM05D008234 ORTHO05D010422 9.2e-107 391.3 386 52.6
CDE04G1659 Ceratophyllum demersum HOM05D008234 ORTHO05D010422 1.6e-106 390.6 410 50.0
SalBow4G0332 Salvia bowleyana HOM05D008234 ORTHO05D010422 5.9e-106 388.7 388 53.6
CSS0041765 Camellia sinensis var. sinensis HOM05D008234 ORTHO05D010422 4.3e-104 382.5 432 52.1
Hund19548 Selenicereus undatus HOM05D008234 ORTHO05D010422 1.8e-102 377.1 420 49.8
FAN20G2600 Fragaria x ananassa HOM05D008234 ORTHO05D010422 5.8e-101 372.1 340 57.1
Manes.03G062500 Manihot esculenta HOM05D008234 ORTHO05D010422 1.7e-100 370.5 424 50.7
AUR62023021 Chenopodium quinoa HOM05D008234 ORTHO05D010422 7.8e-98 361.7 425 47.8
MD08G1118800 Malus domestica HOM05D008234 ORTHO05D010422 6.2e-95 352.1 422 50.0
Glyma.14G141400 Glycine max HOM05D008234 ORTHO05D010422 8.9e-94 348.2 382 49.7
Medtr1g008360 Medicago truncatula HOM05D008234 ORTHO05D010422 2.9e-92 343.2 427 48.5
Psat6g034200 Pisum sativum HOM05D008234 ORTHO05D010422 6.0e-90 335.5 425 46.6
Ciclev10008407m.g Citrus clementina HOM05D008234 ORTHO05D010422 2.3e-89 333.6 429 49.0
Potri.006G243000 Populus trichocarpa HOM05D008234 ORTHO05D010422 6.6e-89 332.0 429 48.0
Thecc.03G110200 Theobroma cacao HOM05D008234 ORTHO05D010422 1.2e-87 327.8 423 46.3
ECA233G2242 Erigeron canadensis HOM05D008234 ORTHO05D010422 3.4e-85 319.7 275 59.6
Duzib068G0878 Durio zibethinus HOM05D008234 ORTHO05D010422 4.4e-85 319.3 422 45.5
EL10Ac2g04079 Beta vulgaris HOM05D008234 ORTHO05D010422 8.3e-84 315.1 450 43.6
Phvul.001G078800 Phaseolus vulgaris HOM05D008234 ORTHO05D010422 8.3e-84 315.1 427 45.0
Gohir.A03G071900 Gossypium hirsutum HOM05D008234 ORTHO05D010422 5.4e-83 312.4 322 52.5
FAN15G0125 Fragaria x ananassa HOM05D008234 ORTHO05D010422 9.2e-83 311.6 349 49.6
FvH4_2g36160 Fragaria vesca HOM05D008234 ORTHO05D010422 1.7e-81 307.4 349 49.0
Os03g0159700 Oryza sativa ssp. japonica HOM05D008234 ORTHO05D010422 1.1e-80 304.7 417 42.0
Zm00001eb004480 Zea mays HOM05D008234 ORTHO05D010422 2.5e-80 303.5 388 42.5
Cfa013340 Carpinus fangiana HOM05D001758 ORTHO05D005969 4.3e-80 302.8 366 47.8
COL.COLO4_28841 Corchorus olitorius HOM05D008234 ORTHO05D010422 7.6e-77 292.0 405 42.0
Oeu011264.1 Olea europaea HOM05D008234 ORTHO05D010422 1.9e-75 287.3 298 52.3
AUR62009335 Chenopodium quinoa HOM05D008234 ORTHO05D010422 3.5e-74 283.1 297 51.2
HPP92_009609 Vanilla planifolia HOM05D008234 ORTHO05D010422 4.6e-74 282.7 382 41.6
Psat6g034160 Pisum sativum HOM05D008234 ORTHO05D010422 1.5e-72 277.7 390 44.4
ATR0697G092 Amborella trichopoda HOM05D008234 ORTHO05D010422 9.9e-69 265.0 382 40.6
Haze_21845 Corylus avellana HOM05D008234 ORTHO05D010422 1.3e-68 264.6 331 46.2
CsaV3_3G047390 Cucumis sativus L. HOM05D008234 ORTHO05D010422 1.2e-66 258.1 317 46.7
MELO3C003586.2 Cucumis melo HOM05D008234 ORTHO05D010422 1.6e-66 257.7 279 48.4
Nn2g11729 Nelumbo nucifera HOM05D008234 ORTHO05D010422 5.6e-64 249.2 427 40.3
Gorai.003G103400 Gossypium raimondii HOM05D008234 ORTHO05D001322 2.8e-63 246.9 365 43.8
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.6e-58 231.1 387 37.2
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 1.1e-56 224.9 234 50.4
Gohir.D03G098650 Gossypium hirsutum HOM05D008234 ORTHO05D010422 3.1e-46 190.3 136 71.3
Gohir.D03G098600 Gossypium hirsutum HOM05D008234 ORTHO05D010422 1.5e-45 188.0 207 51.2
SEGI_11609 Sequoiadendron giganteum HOM05D008234 ORTHO05D010422 1.4e-43 181.4 289 37.7
Hma1.2p1_1434F.1_g283110 Hydrangea macrophylla HOM05D008234 ORTHO05D010422 8.5e-28 129.0 99 63.6
Dinv11864 Davidia involucrata HOM05D008234 ORTHO05D010422 3.2e-19 100.5 57 86.0
Sed0021692 Sechium edule HOM05D008234 ORTHO05D010422 4.2e-19 100.1 157 42.7
AagrBONN_evm.TU.Sc2ySwM_369.313 Anthoceros agrestis HOM05D005775 ORTHO05D000023 1.1e-11 75.5 353 22.1
Mapoly0072s0009 Marchantia polymorpha HOM05D005775 ORTHO05D000023 8.0e-10 69.3 190 29.5
TAR383G0679 Trochodendron aralioides HOM05D007173 ORTHO05D009151 1.4e-09 68.6 155 27.1
SMO222G0015 Selaginella moellendorffii HOM05D013811 ORTHO05D017113 6.8e-09 66.2 404 21.5
Peaxi162Scf00231g00042 Petunia axillaris HOM05D007173 ORTHO05D009151 8.8e-09 65.9 151 26.5
CDE10G1068 Ceratophyllum demersum HOM05D005775 ORTHO05D000023 7.5e-08 62.8 136 32.4
BraA07t28860Z Brassica rapa HOM05D007173 ORTHO05D009151 9.7e-08 62.4 156 27.6
Lalb_Chr18g0048891 Lupinus albus HOM05D007173 ORTHO05D009151 9.7e-08 62.4 229 22.7
MD03G1273200 Malus domestica HOM05D005775 ORTHO05D000023 1.7e-07 61.6 137 32.8
HPP92_016385 Vanilla planifolia HOM05D007173 ORTHO05D009151 1.7e-07 61.6 167 26.3
GSVIVG01032162001 Vitis vinifera HOM05D001779 ORTHO05D001753 2.2e-07 61.2 160 26.2
Hma1.2p1_0386F.1_g141780 Hydrangea macrophylla HOM05D000001 ORTHO05D000003 2.8e-07 60.8 192 27.1
SMO347G0411 Selaginella moellendorffii HOM05D013811 ORTHO05D017113 2.8e-07 60.8 132 29.5
Atru.chr4.20 Acer truncatum HOM05D000001 ORTHO05D000003 3.7e-07 60.5 204 25.0
ATR0487G016 Amborella trichopoda HOM05D005775 ORTHO05D000023 3.7e-07 60.5 341 19.6
Cfa007278 Carpinus fangiana HOM05D007173 ORTHO05D009151 3.7e-07 60.5 187 25.1
FvH4_4g22810 Fragaria vesca HOM05D000001 ORTHO05D010470 3.7e-07 60.5 114 31.6
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 3.7e-07 60.5 114 31.6
Potri.016G119600 Populus trichocarpa HOM05D005775 ORTHO05D000023 3.7e-07 60.5 342 20.5
Aqoxy5G03254 Aquilegia oxysepala HOM05D007173 ORTHO05D009151 4.8e-07 60.1 169 25.4
COL.COLO4_06474 Corchorus olitorius HOM05D007173 ORTHO05D009151 4.8e-07 60.1 166 27.1
PGR102G1884 Punica granatum HOM05D007173 ORTHO05D009151 4.8e-07 60.1 156 25.0
CiPaw.03G118400 Carya illinoinensis HOM05D007173 ORTHO05D009151 6.3e-07 59.7 165 26.1
Haze_14814 Corylus avellana HOM05D007173 ORTHO05D009151 6.3e-07 59.7 155 25.8
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 6.3e-07 59.7 114 31.6
Glyma.19G151700 Glycine max HOM05D005775 ORTHO05D000023 6.3e-07 59.7 177 28.2
SMO358G0295 Selaginella moellendorffii HOM05D013811 ORTHO05D017113 6.3e-07 59.7 132 30.3
A07p10660 Brassica napus HOM05D007173 ORTHO05D009151 8.3e-07 59.3 156 26.9
FAN20G1843 Fragaria x ananassa HOM05D005775 ORTHO05D000023 8.3e-07 59.3 154 27.9
RcHm_v2.0_Chr4g0429041 Rosa chinensis HOM05D000001 ORTHO05D010470 8.3e-07 59.3 114 31.6
Aa31LG3G14390 Aethionema arabicum HOM05D000001 ORTHO05D010470 1.4e-06 58.5 119 34.5
Potri.005G074000 Populus trichocarpa HOM05D000001 ORTHO05D000003 1.4e-06 58.5 205 26.3
Prupe.8G249700 Prunus persica HOM05D005775 ORTHO05D000023 1.4e-06 58.5 383 21.1
MD00G1221000 Malus domestica HOM05D002244 ORTHO05D002269 1.8e-06 58.2 157 25.5
SEGI_28259 Sequoiadendron giganteum HOM05D005775 ORTHO05D000023 1.8e-06 58.2 111 32.4
BcaC06g35432 Brassica carinata HOM05D007173 ORTHO05D009151 2.4e-06 57.8 156 26.3
C07p16260 Brassica napus HOM05D007173 ORTHO05D009151 2.4e-06 57.8 156 26.3
MELO3C033379.2 Cucumis melo HOM05D007173 ORTHO05D009151 2.4e-06 57.8 165 27.9
CsaV3_4G030520 Cucumis sativus L. HOM05D007173 ORTHO05D009151 2.4e-06 57.8 165 27.9
MD17G1234700 Malus domestica HOM05D007173 ORTHO05D009151 2.4e-06 57.8 151 24.5
SMO194G0003 Selaginella moellendorffii HOM05D013811 ORTHO05D017113 2.4e-06 57.8 203 25.6
AUR62014930 Chenopodium quinoa HOM05D002785 ORTHO05D003042 3.1e-06 57.4 144 27.8
Thecc.01G407600 Theobroma cacao HOM05D001779 ORTHO05D001753 3.1e-06 57.4 137 28.5
FAN27G3110 Fragaria x ananassa HOM05D005775 ORTHO05D000023 4.1e-06 57.0 330 20.6
Gohir.D11G055100 Gossypium hirsutum HOM05D000001 ORTHO05D000003 4.1e-06 57.0 187 24.1
QL11p032336 Quercus lobata HOM05D003056 ORTHO05D003422 4.1e-06 57.0 128 32.8
Sabra05G0060600 Salix brachista HOM05D000001 ORTHO05D000003 4.1e-06 57.0 186 27.4
Solyc11g040060.3 Solanum lycopersicum HOM05D000001 ORTHO05D000003 4.1e-06 57.0 232 22.4
vmacro02530 Vaccinium macrocarpon HOM05D005775 ORTHO05D000023 4.1e-06 57.0 341 22.0
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 5.3e-06 56.6 114 30.7
EL10Ac8g19354 Beta vulgaris HOM05D001121 ORTHO05D003422 7.0e-06 56.2 143 30.1
AUR62017862 Chenopodium quinoa HOM05D002785 ORTHO05D003042 7.0e-06 56.2 144 28.5
Sp6g29030 Schrenkiella parvula HOM05D000424 ORTHO05D000355 7.0e-06 56.2 133 28.6
SGA_v2.0_scaffold25G10796 Striga asiatica HOM05D002460 ORTHO05D002716 7.0e-06 56.2 239 23.0
CDE10G0767 Ceratophyllum demersum HOM05D000001 ORTHO05D000003 9.1e-06 55.8 204 25.5
Manes.12G158300 Manihot esculenta HOM05D007173 ORTHO05D009151 9.1e-06 55.8 180 23.3
Sopen11g017250 Solanum pennellii HOM05D000001 ORTHO05D000003 9.1e-06 55.8 232 22.0


User provided reference genes

Program Settings