Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14194 Davidia involucrata HOM05D004341 ORTHO05D005075 2.0e-58 229.2 144 100.0
Dinv05280 Davidia involucrata HOM05D004341 ORTHO05D005075 1.5e-32 143.3 108 92.6
Dinv17497 Davidia involucrata HOM05D004341 ORTHO05D005075 3.6e-31 138.7 108 91.7
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla HOM05D004341 ORTHO05D005075 4.7e-23 111.7 109 70.6
Sc19g0001960 Simmondsia chinensis HOM05D004341 ORTHO05D005075 1.4e-19 100.1 108 74.1
Nn1g09858 Nelumbo nucifera HOM05D004341 ORTHO05D005075 3.5e-18 95.5 108 71.3
Oeu020261.1 Olea europaea HOM05D004341 ORTHO05D005075 1.3e-17 93.6 109 56.0
Oeu020262.1 Olea europaea HOM05D004341 ORTHO05D005075 1.7e-17 93.2 109 56.9
TAR626G1254 Trochodendron aralioides HOM05D004341 ORTHO05D005075 1.7e-17 93.2 108 67.6
Cc09_g04540 Coffea canephora HOM05D004341 ORTHO05D005075 8.7e-17 90.9 116 54.3
Oeu062532.1 Olea europaea HOM05D004341 ORTHO05D005075 8.7e-17 90.9 109 56.9
Hund04610 Selenicereus undatus HOM05D004341 ORTHO05D005075 4.8e-15 85.1 109 55.0
Manes.16G060700 Manihot esculenta HOM05D004341 ORTHO05D005075 1.4e-14 83.6 110 56.4
HanXRQChr12g0384191 Helianthus annuus HOM05D004341 ORTHO05D005075 1.8e-14 83.2 109 58.7
Lsat_1_v5_gn_4_45480 Lactuca sativa HOM05D004341 ORTHO05D005075 2.6e-13 79.3 109 52.3
Hund11810 Selenicereus undatus HOM05D004341 ORTHO05D005075 3.4e-13 79.0 127 45.7
Lsat_1_v5_gn_1_1241 Lactuca sativa HOM05D004341 ORTHO05D005075 1.7e-12 76.6 109 50.5
Peaxi162Scf00188g00814 Petunia axillaris HOM05D004341 ORTHO05D005075 3.8e-12 75.5 109 49.5
EL10Ac3g05823 Beta vulgaris HOM05D004341 ORTHO05D005075 1.1e-11 73.9 110 51.8
MELO3C014011.2 Cucumis melo HOM05D004341 ORTHO05D005075 2.4e-11 72.8 116 52.6
TWI15G0268 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 2.4e-11 72.8 116 54.3
PGR083G1473 Punica granatum HOM05D004341 ORTHO05D005075 4.2e-11 72.0 109 62.4
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 5.4e-11 71.6 114 52.6
Lsat_1_v5_gn_3_129240 Lactuca sativa HOM05D004341 ORTHO05D005075 5.4e-11 71.6 111 55.0
TWI63G1746 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 7.1e-11 71.2 115 47.8
CSS0011539 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 9.3e-11 70.9 122 45.9
AUR62002184 Chenopodium quinoa HOM05D004341 ORTHO05D005075 9.3e-11 70.9 112 56.2
CsaV3_3G003450 Cucumis sativus L. HOM05D004341 ORTHO05D005075 1.2e-10 70.5 116 51.7
ClCG00G000170 Citrullus lanatus HOM05D004341 ORTHO05D005075 1.6e-10 70.1 116 59.5
ClCG10G003420 Citrullus lanatus HOM05D004341 ORTHO05D005075 1.6e-10 70.1 116 59.5
Nitab4.5_0000414g0070 Nicotiana tabacum HOM05D004341 ORTHO05D005075 2.7e-10 69.3 109 49.5
Sed0011196 Sechium edule HOM05D004341 ORTHO05D005075 3.5e-10 68.9 118 59.3
SalBow5G0282 Salvia bowleyana HOM05D004341 ORTHO05D005075 4.6e-10 68.6 108 48.1
Thecc.09G217200 Theobroma cacao HOM05D004341 ORTHO05D005075 4.6e-10 68.6 121 57.0
Cpa.g.c30482 Carica papaya HOM05D004341 ORTHO05D005075 1.3e-09 67.0 109 50.5
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea HOM05D004341 ORTHO05D005075 1.8e-09 66.6 130 54.6
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea HOM05D004341 ORTHO05D005075 1.8e-09 66.6 130 54.6
Duzib150G1434 Durio zibethinus HOM05D004341 ORTHO05D005075 1.8e-09 66.6 126 57.1
ECA234G2847 Erigeron canadensis HOM05D004341 ORTHO05D005075 1.8e-09 66.6 116 52.6
Nitab4.5_0012569g0030 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.8e-09 66.6 109 56.9
Nitab4.5_0015757g0020 Nicotiana tabacum HOM05D004341 ORTHO05D005075 3.0e-09 65.9 109 49.5
Gohir.A10G168600 Gossypium hirsutum HOM05D004341 ORTHO05D005075 3.9e-09 65.5 124 37.1
Nitab4.5_0015757g0010 Nicotiana tabacum HOM05D004341 ORTHO05D005075 3.9e-09 65.5 109 50.5
Gohir.D13G218100 Gossypium hirsutum HOM05D004341 ORTHO05D005075 5.1e-09 65.1 124 40.3
Gorai.013G248900 Gossypium raimondii HOM05D004341 ORTHO05D005075 5.1e-09 65.1 124 40.3
Actinidia34783 Actinidia chinensis HOM05D004341 ORTHO05D005075 8.7e-09 64.3 125 46.4
MSTRG.22399 Avicennia marina HOM05D004341 ORTHO05D005075 1.1e-08 63.9 108 48.1
HanXRQChr13g0422931 Helianthus annuus HOM05D004341 ORTHO05D005075 1.1e-08 63.9 114 51.8
CAN.G1144.22 Capsicum annuum HOM05D004341 ORTHO05D005075 1.5e-08 63.5 116 44.8
Lalb_Chr06g0163081 Lupinus albus HOM05D004341 ORTHO05D005075 1.5e-08 63.5 112 50.0
SGA_v2.0_scaffold28G11752 Striga asiatica HOM05D004341 ORTHO05D005075 1.5e-08 63.5 107 48.6
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea HOM05D004341 ORTHO05D005075 1.9e-08 63.2 130 53.1
AUR62015527 Chenopodium quinoa HOM05D004341 ORTHO05D005075 3.3e-08 62.4 111 55.9
Gohir.D10G174800 Gossypium hirsutum HOM05D004341 ORTHO05D005075 3.3e-08 62.4 124 43.5
Gorai.011G195600 Gossypium raimondii HOM05D004341 ORTHO05D005075 3.3e-08 62.4 124 43.5
MBI06_g30999_MAGBIO Magnolia biondii HOM05D004341 ORTHO05D005075 3.3e-08 62.4 110 61.8
Peaxi162Scf00119g01515 Petunia axillaris HOM05D004341 ORTHO05D005075 3.3e-08 62.4 110 50.0
GSVIVG01038073001 Vitis vinifera HOM05D004341 ORTHO05D005075 7.4e-08 61.2 108 63.0
Ah.07g207810 Amaranthus hybridus HOM05D004341 ORTHO05D005075 9.6e-08 60.8 115 52.2
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea HOM05D004341 ORTHO05D005075 1.3e-07 60.5 132 53.0
Gohir.A13G214400 Gossypium hirsutum HOM05D004341 ORTHO05D005075 1.3e-07 60.5 124 42.7
Lj1A1153T31 Lonicera japonica HOM05D004341 ORTHO05D005075 1.6e-07 60.1 108 61.1
Lj7A164T18 Lonicera japonica HOM05D004341 ORTHO05D005075 2.8e-07 59.3 108 59.3
Solyc05g010570.3 Solanum lycopersicum HOM05D004341 ORTHO05D005075 2.8e-07 59.3 109 59.6
Sopen05g006350 Solanum pennellii HOM05D004341 ORTHO05D005075 2.8e-07 59.3 109 59.6
CAN.G359.8 Capsicum annuum HOM05D004341 ORTHO05D005075 3.7e-07 58.9 108 42.6
Psat6g047640 Pisum sativum HOM05D004341 ORTHO05D005075 8.1e-07 57.8 115 47.0
CSS0011039 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 1.1e-06 57.4 125 48.0
Nitab4.5_0000422g0150 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.4e-06 57.0 109 45.9
THA.LOC104806232 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 1.8e-06 56.6 114 47.4
HPP92_006338 Vanilla planifolia HOM05D004341 ORTHO05D005075 1.8e-06 56.6 105 61.9
HPP92_027866 Vanilla planifolia HOM05D004341 ORTHO05D005075 1.8e-06 56.6 105 61.9
Ca_26283_v3 Cicer arietinum L. HOM05D004341 ORTHO05D005075 4.0e-06 55.5 110 54.5


User provided reference genes

Program Settings