Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 8.7e-114 413.7 215 100.0
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 5.2e-66 255.0 205 64.4
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.1e-63 247.3 208 61.5
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 5.4e-63 245.0 216 59.7
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 7.7e-62 241.1 211 59.7
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 2.9e-61 239.2 219 57.5
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 2.9e-61 239.2 207 61.4
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 2.5e-60 236.1 208 61.5
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 9.5e-60 234.2 197 62.4
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 3.6e-59 232.3 211 58.8
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 4.7e-59 231.9 210 60.0
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 6.1e-59 231.5 208 59.1
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 6.1e-59 231.5 211 61.1
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 8.0e-59 231.1 209 60.3
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 1.4e-58 230.3 224 56.7
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 1.4e-58 230.3 190 60.0
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.8e-58 229.9 211 60.7
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.8e-58 229.9 211 58.3
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 8.9e-58 227.6 209 59.8
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.2e-57 227.3 211 57.8
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.0e-57 226.5 209 59.3
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.0e-57 226.5 209 59.3
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.6e-57 226.1 211 57.8
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 9.8e-57 224.2 206 59.7
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.7e-56 223.4 211 57.3
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 1.7e-56 223.4 201 59.7
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 5.4e-55 218.4 221 55.7
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.2e-54 217.2 200 55.0
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 3.5e-54 215.7 196 58.7
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.3e-53 213.8 199 56.3
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 1.7e-53 213.4 201 63.2
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 3.0e-53 212.6 218 53.7
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 1.5e-52 210.3 211 61.1
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.9e-52 209.9 211 55.5
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 4.3e-52 208.8 199 54.8
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 9.5e-52 207.6 211 54.0
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 9.5e-52 207.6 210 54.3
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 2.8e-51 206.1 198 55.1
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.0e-51 204.5 220 51.4
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 8.0e-51 204.5 220 50.9
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 1.4e-50 203.8 211 54.0
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 1.8e-50 203.4 212 53.3
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.3e-48 197.2 201 52.7
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.3e-48 197.2 201 53.7
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 3.5e-46 189.1 220 47.7
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 1.7e-45 186.8 208 48.6
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 3.0e-45 186.0 195 51.8
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 5.6e-44 181.8 207 52.7
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 2.1e-43 179.9 205 49.3
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 4.9e-40 168.7 196 46.9
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.9e-39 166.8 199 44.7
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 7.1e-39 164.9 191 49.7
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 1.2e-38 164.1 199 47.2
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 8.6e-37 157.9 193 45.1
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.1e-36 157.5 142 58.5
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.6e-35 152.5 166 49.4
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 3.6e-35 152.5 188 45.7
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 9.9e-33 144.4 230 39.1
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 1.4e-31 140.6 115 62.6
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 3.0e-29 132.9 119 53.8
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 5.6e-28 128.6 156 44.2
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 1.6e-27 127.1 156 42.3
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 8.1e-27 124.8 175 45.1
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 4.0e-26 122.5 188 38.8
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 6.9e-26 121.7 176 41.5
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.2e-25 120.9 130 50.0
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 1.7e-24 117.1 220 32.7
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.1e-23 114.4 106 54.7
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 5.4e-23 112.1 121 49.6
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 7.8e-22 108.2 167 41.9
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 7.8e-22 108.2 93 60.2
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 1.7e-21 107.1 113 51.3
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 5.1e-21 105.5 98 57.1
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 3.1e-18 96.3 97 52.6
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 6.9e-18 95.1 96 53.1
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 5.8e-17 92.0 98 52.0
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 4.2e-15 85.9 96 47.9
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.4e-15 85.5 65 63.1
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 3.5e-14 82.8 70 61.4


User provided reference genes

Program Settings