Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 0.0e+00 1406.0 740 100.0
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 1.9e-144 517.3 761 47.8
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 1.5e-128 464.5 770 45.1
Dinv14057 Davidia involucrata HOM05D008144 ORTHO05D010081 2.8e-111 407.1 273 84.2
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 9.7e-96 355.5 766 39.0
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 7.0e-94 349.4 826 35.5
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 9.1e-94 349.0 818 36.9
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 6.5e-92 342.8 867 35.9
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 7.0e-86 322.8 823 34.5
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 1.2e-85 322.0 898 33.9
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 1.1e-78 298.9 827 34.2
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 4.5e-77 293.5 875 33.9
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 8.5e-76 289.3 721 36.9
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 8.5e-76 289.3 842 32.2
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 3.1e-70 270.8 794 33.5
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 8.6e-68 262.7 814 31.4
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 3.3e-67 260.8 830 32.8
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 1.2e-50 205.7 576 32.1
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 3.6e-50 204.1 1128 25.7
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 4.7e-50 203.8 793 30.4
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 8.9e-49 199.5 778 29.9
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.3e-47 195.7 791 29.7
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.3e-47 195.7 791 29.7
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.9e-47 193.7 793 29.6
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 7.3e-43 179.9 800 28.1
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 1.6e-42 178.7 771 28.7
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 4.0e-41 174.1 1249 24.5
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 4.0e-41 174.1 758 28.9
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 2.6e-40 171.4 758 29.0
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 2.2e-39 168.3 813 30.3
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 8.3e-39 166.4 134 67.2
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 8.3e-39 166.4 779 28.4
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.6e-37 162.2 761 28.6
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 2.7e-37 161.4 713 28.8
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 3.3e-35 154.5 801 28.5
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 1.5e-32 145.6 799 26.3
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 3.4e-32 144.4 784 27.4
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 6.0e-29 133.7 927 24.2
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 5.1e-28 130.6 500 31.4
Aqoxy2G03478 Aquilegia oxysepala HOM05D008144 ORTHO05D031257 1.5e-27 129.0 800 25.2
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 1.8e-25 122.1 787 27.3
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 9.0e-25 119.8 164 47.0
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 2.2e-23 115.2 769 27.0
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 2.9e-23 114.8 259 38.2
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 8.4e-23 113.2 778 26.3
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 7.1e-22 110.2 318 34.9
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 6.0e-21 107.1 240 35.4
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 1.7e-20 105.5 759 27.0
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 5.1e-20 104.0 1013 23.5
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.9e-19 102.1 589 27.7
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 9.6e-19 99.8 367 31.1
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 2.1e-18 98.6 464 28.0
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 2.8e-18 98.2 380 30.5
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 3.6e-18 97.8 463 29.6
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 4.8e-18 97.4 804 25.1
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 1.1e-17 96.3 722 27.0
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 1.3e-15 89.4 156 41.7
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 1.3e-15 89.4 715 25.5
PGR004G2389 Punica granatum HOM05D008144 ORTHO05D010081 3.2e-14 84.7 816 24.3
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 7.1e-14 83.6 446 26.7
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 3.5e-13 81.3 454 27.3
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 4.6e-13 80.9 769 24.4
Actinidia40109 Actinidia chinensis HOM05D008144 ORTHO05D010081 7.9e-13 80.1 810 24.4
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 6.7e-12 77.0 352 29.0
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 9.6e-11 73.2 412 26.2
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 2.6e-08 65.1 777 25.0
Lj3P721T43 Lonicera japonica HOM05D008144 ORTHO05D010081 4.5e-08 64.3 253 30.4
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 7.6e-08 63.5 320 27.5
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 2.9e-07 61.6 322 28.6
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 2.5e-06 58.5 157 31.8
AL7G41440 Arabidopsis lyrata HOM05D011210 ORTHO05D013204 4.2e-06 57.8 159 35.8


User provided reference genes

Program Settings