Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14050 Davidia involucrata HOM05D004596 ORTHO05D005853 4.2e-205 718.0 418 100.0
Dinv44581 Davidia involucrata HOM05D004596 ORTHO05D005853 7.5e-154 547.7 429 80.7
Hma1.2p1_0549F.1_g177070 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 7.6e-130 468.0 426 72.1
Hma1.2p1_0549F.1_g177080 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 3.0e-126 456.1 398 74.9
CSS0040136 Camellia sinensis var. sinensis HOM05D004596 ORTHO05D005853 5.8e-122 441.8 428 69.6
GSVIVG01018052001 Vitis vinifera HOM05D004596 ORTHO05D005853 1.4e-112 410.6 415 68.9
Lj3C724G8 Lonicera japonica HOM05D004596 ORTHO05D005853 1.3e-108 397.5 482 59.5
Actinidia04506 Actinidia chinensis HOM05D004596 ORTHO05D005853 6.2e-108 395.2 425 65.6
Rhsim04G0196700 Rhododendron simsii HOM05D004596 ORTHO05D005853 2.7e-103 379.8 431 62.9
QL06p000822 Quercus lobata HOM05D004596 ORTHO05D005853 4.3e-101 372.5 427 61.6
Potri.008G158600 Populus trichocarpa HOM05D004596 ORTHO05D005853 1.0e-97 361.3 402 63.2
TAR362G0583 Trochodendron aralioides HOM05D004596 ORTHO05D005853 9.3e-96 354.8 423 60.8
Potri.010G081400 Populus trichocarpa HOM05D004596 ORTHO05D005853 2.1e-95 353.6 400 63.8
Sabra10G0061500 Salix brachista HOM05D004596 ORTHO05D005853 3.9e-94 349.4 431 60.3
Hma1.2p1_1311F.1_g274870 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 3.3e-93 346.3 381 54.3
Cfa008428 Carpinus fangiana HOM05D004596 ORTHO05D005853 5.7e-93 345.5 434 59.7
TAR633G0587 Trochodendron aralioides HOM05D004596 ORTHO05D005853 9.7e-93 344.7 412 61.7
TWI73G0280 Tripterygium wilfordii HOM05D004596 ORTHO05D005853 4.8e-92 342.4 404 58.7
Peaxi162Scf00316g00026 Petunia axillaris HOM05D004596 ORTHO05D005853 3.4e-90 336.3 419 58.9
Cc03_g04360 Coffea canephora HOM05D004596 ORTHO05D005853 5.0e-89 332.4 429 58.3
Nn6g34173 Nelumbo nucifera HOM05D004596 ORTHO05D005853 5.5e-88 328.9 373 64.9
CAN.G1435.8 Capsicum annuum HOM05D004596 ORTHO05D005853 1.4e-86 324.3 418 58.1
Haze_11239 Corylus avellana HOM05D004596 ORTHO05D005853 1.1e-85 321.2 437 55.6
CsaV3_3G012850 Cucumis sativus L. HOM05D004596 ORTHO05D005853 1.5e-85 320.9 421 58.2
ClCG05G004810 Citrullus lanatus HOM05D004596 ORTHO05D005853 1.7e-84 317.4 426 57.3
Sed0001129 Sechium edule HOM05D004596 ORTHO05D005853 4.8e-84 315.8 399 60.2
vmacro08381 Vaccinium macrocarpon HOM05D004596 ORTHO05D005853 1.4e-83 314.3 394 59.1
Prupe.1G022600 Prunus persica HOM05D004596 ORTHO05D005853 1.2e-82 311.2 442 56.3
Lsat_1_v5_gn_5_103320 Lactuca sativa HOM05D004596 ORTHO05D005853 2.6e-82 310.1 387 60.5
DCAR_024187 Daucus carota HOM05D004596 ORTHO05D005853 7.7e-82 308.5 426 57.5
Nitab4.5_0002652g0030 Nicotiana tabacum HOM05D004596 ORTHO05D005853 8.5e-81 305.1 382 61.5
MBI11_g37065_MAGBIO Magnolia biondii HOM05D004596 ORTHO05D005853 1.1e-80 304.7 379 60.7
Nitab4.5_0000224g0010 Nicotiana tabacum HOM05D004596 ORTHO05D005853 2.5e-80 303.5 443 54.4
Solyc09g082800.3 Solanum lycopersicum HOM05D004596 ORTHO05D005853 5.2e-78 295.8 430 54.9
Sopen09g031650 Solanum pennellii HOM05D004596 ORTHO05D005853 5.2e-78 295.8 430 54.7
PGSC0003DMG400030169 Solanum tuberosum HOM05D004596 ORTHO05D005853 1.1e-77 294.7 427 54.8
Thecc.04G239700 Theobroma cacao HOM05D004596 ORTHO05D005853 1.1e-77 294.7 397 57.9
Ca_20830_v3 Cicer arietinum L. HOM05D004596 ORTHO05D005853 2.0e-77 293.9 436 54.8
Glyma.20G151300 Glycine max HOM05D004596 ORTHO05D005853 4.4e-77 292.7 430 54.7
Sabra08G0120900 Salix brachista HOM05D004596 ORTHO05D005853 1.3e-76 291.2 443 52.8
VMungo0720G1744 Vigna mungo HOM05D004596 ORTHO05D005853 2.2e-76 290.4 401 55.9
MD16G1200600 Malus domestica HOM05D004596 ORTHO05D005853 3.7e-76 289.7 395 59.2
PGR142G3885 Punica granatum HOM05D004596 ORTHO05D005853 4.8e-76 289.3 425 56.7
Glyma.10G243000 Glycine max HOM05D004596 ORTHO05D005853 2.4e-75 287.0 430 53.0
MELO3C006495.2 Cucumis melo HOM05D004596 ORTHO05D005853 3.1e-75 286.6 432 54.4
TPR.G29898 Trifolium pratense HOM05D004596 ORTHO05D005853 3.1e-75 286.6 403 56.6
Aqoxy2G03471 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 5.9e-74 282.3 371 59.8
Hund20642 Selenicereus undatus HOM05D004596 ORTHO05D005853 1.7e-73 280.8 422 43.4
Duzib151G0659 Durio zibethinus HOM05D004596 ORTHO05D005853 3.8e-73 279.6 408 55.9
Ciclev10004189m.g Citrus clementina HOM05D004596 ORTHO05D005853 5.0e-73 279.3 395 56.5
FvH4_4g01620 Fragaria vesca HOM05D004596 ORTHO05D005853 8.5e-73 278.5 396 59.3
Cpa.g.sc44.129 Carica papaya HOM05D004596 ORTHO05D005853 1.1e-72 278.1 432 53.7
Phvul.007G062700 Phaseolus vulgaris HOM05D004596 ORTHO05D005853 1.2e-71 274.6 421 53.2
MD13G1201100 Malus domestica HOM05D004596 ORTHO05D005853 1.6e-71 274.2 396 56.8
Gohir.D10G149100 Gossypium hirsutum HOM05D004596 ORTHO05D005853 2.1e-71 273.9 396 56.1
Gorai.011G166400 Gossypium raimondii HOM05D004596 ORTHO05D005853 4.7e-71 272.7 396 56.1
Lj5g0008006 Lotus japonicus HOM05D004596 ORTHO05D005853 2.3e-70 270.4 429 53.8
PSO210G2132 Papaver somniferum HOM05D004596 ORTHO05D005853 4.0e-70 269.6 361 59.3
PSO461G0024 Papaver somniferum HOM05D004596 ORTHO05D005853 4.0e-70 269.6 361 59.0
FAN12G2122 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.3e-68 264.6 396 57.8
AUR62038647 Chenopodium quinoa HOM05D004596 ORTHO05D005853 1.8e-67 260.8 420 52.6
AUR62042985 Chenopodium quinoa HOM05D004596 ORTHO05D005853 3.1e-67 260.0 431 49.9
Lalb_Chr02g0140731 Lupinus albus HOM05D004596 ORTHO05D005853 3.1e-67 260.0 411 53.8
Ah.13g071800 Amaranthus hybridus HOM05D004596 ORTHO05D005853 4.1e-67 259.6 400 55.5
FAN22G0929 Fragaria x ananassa HOM05D004596 ORTHO05D005853 5.3e-67 259.2 393 57.5
FAN17G0661 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.2e-66 258.1 396 57.1
CANSAT78G0708 Cannabis sativa HOM05D004596 ORTHO05D005853 1.6e-66 257.7 420 51.9
RcHm_v2.0_Chr4g0388191 Rosa chinensis HOM05D004596 ORTHO05D005853 1.6e-66 257.7 429 53.8
THA.LOC104826066 Tarenaya hassleriana HOM05D004596 ORTHO05D005853 3.5e-66 256.5 415 53.5
ECA234G3873 Erigeron canadensis HOM05D004596 ORTHO05D005853 7.7e-66 255.4 379 56.2
Oeu064241.3 Olea europaea HOM05D004596 ORTHO05D005853 1.3e-65 254.6 581 40.8
Manes.15G033300 Manihot esculenta HOM05D004596 ORTHO05D005853 5.0e-65 252.7 403 51.4
MSTRG.4066 Avicennia marina HOM05D004596 ORTHO05D005853 8.5e-65 251.9 416 51.2
EL10Ac3g06528 Beta vulgaris HOM05D004596 ORTHO05D005853 8.5e-65 251.9 395 53.2
Medtr4g068740 Medicago truncatula HOM05D004596 ORTHO05D005853 6.8e-62 242.3 398 51.8
Psat7g206760 Pisum sativum HOM05D004596 ORTHO05D005853 4.8e-60 236.1 435 49.4
Carub.0001s0340 Capsella rubella HOM05D004596 ORTHO05D005853 5.9e-58 229.2 395 52.7
Migut.N00215 Erythranthe guttata HOM05D004596 ORTHO05D005853 7.7e-58 228.8 385 50.6
arahy.Tifrunner.gnm1.ann1.0IB5VB Arachis hypogaea HOM05D004596 ORTHO05D005853 2.9e-57 226.9 433 47.3
arahy.Tifrunner.gnm1.ann1.B8VWLB Arachis hypogaea HOM05D004596 ORTHO05D005853 8.6e-57 225.3 433 47.6
CARHR003540 Cardamine hirsuta HOM05D004596 ORTHO05D005853 8.6e-57 225.3 420 50.5
Aa31LG1G20620 Aethionema arabicum HOM05D004596 ORTHO05D005853 1.9e-56 224.2 393 51.9
HanXRQChr10g0294771 Helianthus annuus HOM05D004596 ORTHO05D005853 1.2e-55 221.5 382 53.1
Actinidia40113 Actinidia chinensis HOM05D004596 ORTHO05D005853 2.8e-55 220.3 187 65.8
ATR0665G133 Amborella trichopoda HOM05D004596 ORTHO05D005853 3.6e-55 219.9 354 53.7
CiPaw.01G194700 Carya illinoinensis HOM05D004596 ORTHO05D005853 1.2e-53 214.9 290 61.7
COL.COLO4_21575 Corchorus olitorius HOM05D004596 ORTHO05D005853 2.2e-52 210.7 380 39.7
AL1G13810 Arabidopsis lyrata HOM05D004596 ORTHO05D005853 3.1e-51 206.8 408 49.3
SGA_v2.0_scaffold79G25602 Striga asiatica HOM05D004596 ORTHO05D005853 3.5e-50 203.4 390 50.0
Thhalv10006614m.g Eutrema salsugineum HOM05D004596 ORTHO05D005853 6.6e-49 199.1 431 47.8
Sp1g03030 Schrenkiella parvula HOM05D004596 ORTHO05D005853 1.1e-48 198.4 429 48.7
FAN17G0232 Fragaria x ananassa HOM05D004596 ORTHO05D005853 7.3e-48 195.7 408 47.3
AT1G04210 Arabidopsis thaliana HOM05D004596 ORTHO05D005853 1.2e-47 194.9 426 47.7
HPP92_023540 Vanilla planifolia HOM05D004596 ORTHO05D005853 6.1e-47 192.6 371 50.7
Eucgr.B00983 Eucalyptus grandis HOM05D004596 ORTHO05D005853 1.8e-46 191.0 401 48.4
FAN22G1518 Fragaria x ananassa HOM05D004596 ORTHO05D005853 4.0e-46 189.9 420 44.8
FAN07G2222 Fragaria x ananassa HOM05D004596 ORTHO05D005853 4.6e-42 176.4 402 46.3
FvH4_4g29700 Fragaria vesca HOM05D004596 ORTHO05D005853 2.3e-41 174.1 402 46.5
FAN12G3612 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.3e-41 174.1 402 46.5
BcaC07g42199 Brassica carinata HOM05D004596 ORTHO05D005853 1.9e-40 171.0 398 45.7
SEGI_05896 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 3.3e-40 170.2 340 52.4
RcHm_v2.0_Chr4g0437941 Rosa chinensis HOM05D004596 ORTHO05D005853 1.2e-39 168.3 268 59.0
A09p67970 Brassica napus HOM05D004596 ORTHO05D005853 3.6e-39 166.8 421 44.4
BraA09t42132Z Brassica rapa HOM05D004596 ORTHO05D005853 3.1e-38 163.7 421 44.2
C08p52390 Brassica napus HOM05D004596 ORTHO05D005853 1.2e-37 161.8 427 42.4
Thecc.08G085900 Theobroma cacao HOM05D004596 ORTHO05D005853 5.8e-37 159.5 328 47.3
BcaC05g24461 Brassica carinata HOM05D004596 ORTHO05D005853 1.7e-36 157.9 429 43.6
C05p02420 Brassica napus HOM05D004596 ORTHO05D005853 2.9e-36 157.1 431 43.4
BraA10t42531Z Brassica rapa HOM05D004596 ORTHO05D005853 2.9e-36 157.1 394 44.9
A10p02640 Brassica napus HOM05D004596 ORTHO05D005853 3.7e-36 156.8 394 44.9
BolC5t29021H Brassica oleracea HOM05D004596 ORTHO05D005853 4.9e-36 156.4 431 43.4
Zm00001eb056920 Zea mays HOM05D004596 ORTHO05D005853 1.1e-35 155.2 319 50.5
BolC8t52768H Brassica oleracea HOM05D004596 ORTHO05D005853 1.9e-35 154.5 429 42.2
Atru.chr4.2330 Acer truncatum HOM05D004596 ORTHO05D005853 3.2e-35 153.7 193 49.7
Atru.chr4.2331 Acer truncatum HOM05D004596 ORTHO05D005853 1.6e-31 141.4 136 52.9
CDE06G0929 Ceratophyllum demersum HOM05D004596 ORTHO05D005853 1.5e-29 134.8 121 57.9
CDE07G0263 Ceratophyllum demersum HOM05D004596 ORTHO05D005853 1.3e-28 131.7 146 50.0
Aqoxy7G01427 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 4.9e-28 129.8 430 40.7
BcaC05g24463 Brassica carinata HOM05D004596 ORTHO05D005853 1.6e-26 124.8 131 51.9
SEGI_02681 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 1.0e-25 122.1 162 45.1
Mapoly0005s0269 Marchantia polymorpha HOM05D004596 ORTHO05D005853 4.3e-24 116.7 421 39.4
SEGI_10965 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 7.3e-24 115.9 135 50.4
FvH4_3g32250 Fragaria vesca HOM05D012906 ORTHO05D013883 2.0e-21 107.8 86 67.4
Pp3c8_22390 Physcomitrium patens HOM05D004596 ORTHO05D005853 3.2e-19 100.5 368 38.6
FvH4_1g24542 Fragaria vesca HOM05D004596 ORTHO05D013883 1.1e-16 92.0 86 60.5
CBR_g34713 Chara braunii HOM05D004596 ORTHO05D005853 1.4e-14 85.1 223 50.7
Sc13g0004790 Simmondsia chinensis HOM05D004596 ORTHO05D005853 2.1e-10 71.2 99 42.4
SHI00542 Sapria himalayana HOM05D004596 ORTHO05D013883 3.5e-10 70.5 56 64.3
Gohir.A10G117700 Gossypium hirsutum HOM05D004596 ORTHO05D005853 1.3e-09 68.6 99 47.5
FvH4_1g18400 Fragaria vesca HOM05D004596 ORTHO05D013883 1.1e-08 65.5 59 62.7
SEGI_23993 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 2.5e-08 64.3 118 40.7
SEGI_35525 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 7.3e-08 62.8 132 37.9
SEGI_39228 Sequoiadendron giganteum HOM05D004596 ORTHO05D384348 4.0e-06 57.0 41 65.9


User provided reference genes

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