Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 3.8e-114 414.8 211 100.0
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 2.6e-86 322.4 213 79.3
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 1.5e-81 306.6 211 75.8
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 1.2e-80 303.5 211 74.9
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 3.6e-80 302.0 211 75.4
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 8.9e-79 297.4 207 74.4
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 9.9e-78 293.9 211 73.5
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.7e-77 293.1 211 74.4
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 8.7e-74 280.8 182 78.6
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 1.3e-72 276.9 197 71.6
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 4.8e-72 275.0 213 68.5
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 4.8e-72 275.0 202 70.8
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.4e-71 273.5 212 68.9
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 2.4e-71 272.7 209 70.3
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 8.4e-69 264.2 201 67.2
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.1e-68 263.8 209 65.6
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 1.4e-68 263.5 211 67.3
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 2.4e-68 262.7 211 67.3
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.2e-68 262.3 183 73.2
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.6e-67 260.0 209 65.1
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 1.3e-66 256.9 213 68.5
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 1.3e-66 256.9 213 68.5
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 1.7e-66 256.5 202 70.3
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 5.1e-66 255.0 179 73.2
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 6.6e-66 254.6 211 68.2
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.9e-65 253.1 211 66.4
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 3.3e-65 252.3 211 62.6
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 4.3e-65 251.9 211 67.8
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 1.4e-63 246.9 211 64.0
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 1.5e-62 243.4 239 59.4
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.5e-62 243.4 211 63.5
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 2.0e-62 243.0 172 72.7
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 2.6e-62 242.7 211 63.5
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.5e-62 241.9 212 64.2
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 9.9e-62 240.7 212 63.7
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 2.2e-61 239.6 211 64.0
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 2.9e-61 239.2 211 64.5
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 3.8e-61 238.8 211 64.5
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 3.8e-61 238.8 212 63.7
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 6.4e-61 238.0 211 63.0
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 8.4e-61 237.7 212 63.2
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 1.4e-60 236.9 177 72.9
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 2.4e-60 236.1 210 60.5
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.2e-60 235.3 211 63.0
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.2e-60 235.3 211 63.0
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 5.4e-60 235.0 211 60.7
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 2.1e-59 233.0 211 60.7
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 2.7e-59 232.6 211 61.1
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 3.5e-59 232.3 211 62.1
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 3.5e-59 232.3 183 68.9
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 4.6e-59 231.9 211 61.1
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 7.9e-59 231.1 212 62.7
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 1.8e-58 229.9 211 59.7
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.8e-58 229.9 197 65.5
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 1.8e-58 229.9 210 63.3
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 3.0e-58 229.2 211 62.1
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 3.9e-58 228.8 213 62.0
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.1e-57 227.3 211 60.7
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 1.1e-57 227.3 212 62.7
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 1.5e-57 226.9 211 60.7
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 4.3e-57 225.3 208 61.1
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 2.1e-56 223.0 187 67.4
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 2.8e-56 222.6 196 61.7
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 6.2e-56 221.5 213 62.0
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 8.1e-56 221.1 189 63.5
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 8.1e-56 221.1 212 59.9
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 1.1e-55 220.7 214 59.8
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.1e-55 220.7 181 68.0
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 9.0e-55 217.6 181 64.1
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 2.0e-54 216.5 197 62.4
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 4.5e-54 215.3 211 57.8
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 4.5e-54 215.3 150 74.7
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 4.5e-54 215.3 183 64.5
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 7.6e-54 214.5 197 62.4
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 2.9e-53 212.6 199 58.3
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 4.9e-53 211.8 206 60.7
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 6.5e-53 211.5 183 63.9
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 1.4e-52 210.3 216 55.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 9.3e-52 207.6 157 70.1
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.2e-51 207.2 166 67.5
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 1.6e-51 206.8 166 66.9
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 2.1e-51 206.5 203 60.1
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 2.7e-51 206.1 185 62.7
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.0e-50 204.1 166 66.9
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 1.8e-50 203.4 166 66.3
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.8e-50 203.4 171 62.6
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 5.1e-50 201.8 173 64.7
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.5e-49 200.3 166 65.7
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 2.5e-49 199.5 145 74.5
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 7.4e-49 198.0 167 65.3
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 4.8e-48 195.3 204 54.4
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 8.2e-48 194.5 167 64.1
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 8.2e-48 194.5 184 61.4
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 4.1e-47 192.2 140 69.3
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 3.4e-46 189.1 166 62.0
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.3e-45 187.2 127 73.2
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 4.2e-44 182.2 184 54.3
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.6e-43 180.3 205 51.2
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 2.5e-41 172.9 132 69.7
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.7e-35 152.9 136 64.0
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 3.9e-34 149.1 134 53.7
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 8.8e-34 147.9 136 55.1
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.5e-33 147.1 101 73.3
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 2.8e-32 142.9 134 53.0
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 8.5e-29 131.3 143 46.9
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 8.5e-29 131.3 120 59.2
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 3.6e-27 125.9 166 45.8
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 5.0e-21 105.5 70 77.1
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 3.7e-16 89.4 113 46.0


User provided reference genes

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