Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13985 Davidia involucrata HOM05D000038 ORTHO05D000143 1.2e-85 319.7 147 100.0
Hma1.2p1_0745F.1_g211960 Hydrangea macrophylla HOM05D000038 ORTHO05D000143 1.2e-50 203.4 127 70.9
Manes.03G180000 Manihot esculenta HOM05D000038 ORTHO05D000143 2.7e-50 202.2 127 73.2
Lj6C601T7 Lonicera japonica HOM05D000038 ORTHO05D000143 1.0e-49 200.3 128 70.3
TAR362G0060 Trochodendron aralioides HOM05D000038 ORTHO05D000143 1.4e-49 199.9 127 71.7
Potri.013G060000 Populus trichocarpa HOM05D000038 ORTHO05D000143 3.0e-49 198.7 127 70.1
QL06p002898 Quercus lobata HOM05D000038 ORTHO05D000143 4.8e-47 191.4 127 67.7
Sabra13G0053100 Salix brachista HOM05D000038 ORTHO05D000143 1.4e-46 189.9 127 68.5
Medtr5g006160 Medicago truncatula HOM05D000038 ORTHO05D000143 5.0e-44 181.4 127 63.0
QL06p002733 Quercus lobata HOM05D000038 ORTHO05D000143 5.0e-44 181.4 127 65.4
QL06p002818 Quercus lobata HOM05D000038 ORTHO05D000143 5.0e-44 181.4 127 65.4
Thecc.04G230000 Theobroma cacao HOM05D000038 ORTHO05D000143 6.5e-44 181.0 131 63.4
Hma1.2p1_0745F.1_g211980 Hydrangea macrophylla HOM05D000038 ORTHO05D000143 1.1e-43 180.3 126 64.3
TPR.G37903 Trifolium pratense HOM05D000038 ORTHO05D000143 9.4e-43 177.2 127 61.4
TAR375G1086 Trochodendron aralioides HOM05D000038 ORTHO05D000143 9.4e-43 177.2 129 65.9
TAR636G0327 Trochodendron aralioides HOM05D000038 ORTHO05D000143 1.6e-42 176.4 128 61.7
QL06p002834 Quercus lobata HOM05D000038 ORTHO05D000143 2.7e-42 175.6 126 62.7
Lj6C601T2 Lonicera japonica HOM05D000038 ORTHO05D000143 1.8e-41 172.9 127 60.6
COL.COLO4_05312 Corchorus olitorius HOM05D000637 ORTHO05D001881 2.3e-41 172.6 131 59.5
Atru.chr4.2484 Acer truncatum HOM05D000038 ORTHO05D000143 9.7e-40 167.2 128 63.3
VMungo1215G2769 Vigna mungo HOM05D000038 ORTHO05D000143 2.8e-39 165.6 127 55.9
Atru.ctg752_3.95 Acer truncatum HOM05D000038 ORTHO05D000143 3.7e-39 165.2 127 62.2
ClCG05G005240 Citrullus lanatus HOM05D000038 ORTHO05D000143 4.8e-39 164.9 131 61.1
VMungo1215G2667 Vigna mungo HOM05D000038 ORTHO05D000143 6.3e-39 164.5 127 57.5
VMungo1215G1655 Vigna mungo HOM05D000038 ORTHO05D000143 8.2e-39 164.1 127 57.5
Nn4g26297 Nelumbo nucifera HOM05D000038 ORTHO05D000143 1.8e-38 162.9 128 60.9
Nitab4.5_0000043g0290 Nicotiana tabacum HOM05D000038 ORTHO05D000143 3.1e-38 162.2 130 56.9
Phvul.002G046500 Phaseolus vulgaris HOM05D000038 ORTHO05D000143 4.1e-38 161.8 127 58.3
CAN.G907.10 Capsicum annuum HOM05D000038 ORTHO05D000143 7.0e-38 161.0 131 58.0
Lj6C601T0 Lonicera japonica HOM05D000038 ORTHO05D000143 7.0e-38 161.0 126 57.1
Glyma.08G307300 Glycine max HOM05D000038 ORTHO05D000143 1.3e-36 156.8 130 56.9
PGSC0003DMG400031860 Solanum tuberosum HOM05D000038 ORTHO05D000143 1.3e-36 156.8 130 58.5
Potri.013G059900 Populus trichocarpa HOM05D000038 ORTHO05D000143 5.0e-36 154.8 147 51.7
Solyc09g075910.1 Solanum lycopersicum HOM05D000038 ORTHO05D000143 1.1e-35 153.7 130 56.9
Sopen09g030720 Solanum pennellii HOM05D000038 ORTHO05D000143 3.2e-35 152.1 130 56.2
Manes.03G179900 Manihot esculenta HOM05D000038 ORTHO05D000143 4.2e-35 151.8 130 53.1
TPR.G5505 Trifolium pratense HOM05D000038 ORTHO05D000143 5.5e-35 151.4 129 51.9
Lalb_Chr06g0160641 Lupinus albus HOM05D000038 ORTHO05D000143 7.2e-35 151.0 128 53.1
Haze_00912 Corylus avellana HOM05D000038 ORTHO05D000143 1.4e-33 146.7 131 54.2
Sopen09g030710 Solanum pennellii HOM05D000038 ORTHO05D000143 1.4e-33 146.7 129 55.8
Atru.chr4.2481 Acer truncatum HOM05D000038 ORTHO05D000143 4.0e-33 145.2 129 53.5
Cfa015632 Carpinus fangiana HOM05D000038 ORTHO05D000143 4.0e-33 145.2 130 53.1
Nn4g26298 Nelumbo nucifera HOM05D000038 ORTHO05D000143 4.0e-33 145.2 128 53.9
QL06p002830 Quercus lobata HOM05D000038 ORTHO05D000143 4.0e-33 145.2 132 56.1
Dinv13987 Davidia involucrata HOM05D000038 ORTHO05D000143 5.2e-33 144.8 120 56.7
QL06p002729 Quercus lobata HOM05D000038 ORTHO05D000143 3.3e-32 142.1 130 54.6
QL06p002815 Quercus lobata HOM05D000038 ORTHO05D000143 3.3e-32 142.1 130 54.6
QL06p002885 Quercus lobata HOM05D000038 ORTHO05D000143 1.3e-31 140.2 126 53.2
Phvul.002G046100 Phaseolus vulgaris HOM05D000038 ORTHO05D000143 4.8e-31 138.3 124 46.8
VMungo1215G3188 Vigna mungo HOM05D000038 ORTHO05D000143 8.2e-31 137.5 124 46.0
Manes.03G180100 Manihot esculenta HOM05D000038 ORTHO05D000143 1.4e-30 136.7 128 53.1
VMungo1215G0867 Vigna mungo HOM05D000038 ORTHO05D000143 1.8e-30 136.3 124 46.8
Atru.ctg752_3.101 Acer truncatum HOM05D000038 ORTHO05D000143 7.0e-30 134.4 128 50.8
Atru.ctg752_3.99 Acer truncatum HOM05D000038 ORTHO05D000143 1.2e-29 133.7 103 64.1
CAN.G907.9 Capsicum annuum HOM05D000038 ORTHO05D000143 5.9e-29 131.3 127 48.8
TPR.G5511 Trifolium pratense HOM05D000038 ORTHO05D000143 5.9e-29 131.3 129 49.6
Glyma.08G307400 Glycine max HOM05D000038 ORTHO05D000143 2.9e-28 129.0 125 48.8
Lalb_Chr09g0319831 Lupinus albus HOM05D000038 ORTHO05D000143 1.8e-25 119.8 126 46.8
MBI04_g36446_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 4.0e-25 118.6 141 44.7
Sed0011883 Sechium edule HOM05D000038 ORTHO05D000143 4.0e-25 118.6 130 48.5
MBI04_g20823_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 2.6e-24 115.9 141 42.6
Sopen09g030750 Solanum pennellii HOM05D000038 ORTHO05D000143 4.4e-24 115.2 130 47.7
PGSC0003DMG400031861 Solanum tuberosum HOM05D000038 ORTHO05D000143 7.5e-24 114.4 129 47.3
MBI04_g36447_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 1.7e-23 113.2 117 47.0
Solyc09g075920.1 Solanum lycopersicum HOM05D000038 ORTHO05D000143 3.7e-23 112.1 124 46.8
ClCG05G005210 Citrullus lanatus HOM05D000038 ORTHO05D150021 1.1e-22 110.5 125 48.8
Sed0019355 Sechium edule HOM05D000038 ORTHO05D000143 7.0e-22 107.8 132 43.9
Dinv44520 Davidia involucrata HOM05D000038 ORTHO05D000143 5.9e-21 104.8 111 49.5
Atru.ctg752_3.98 Acer truncatum HOM05D000637 ORTHO05D001881 5.0e-20 101.7 126 43.7
MELO3C006537.2 Cucumis melo HOM05D000038 ORTHO05D000143 2.1e-18 96.3 123 37.4
Nn3g21137 Nelumbo nucifera HOM05D000038 ORTHO05D000143 2.8e-15 85.9 65 52.3
ATR0605G246 Amborella trichopoda HOM05D000038 ORTHO05D000143 6.3e-15 84.7 137 38.7
Medtr1g104555 Medicago truncatula HOM05D000038 ORTHO05D000143 1.2e-13 80.5 127 34.6
PGSC0003DMG400031858 Solanum tuberosum HOM05D000038 ORTHO05D000143 6.6e-12 74.7 89 49.4
HanXRQChr01g0021271 Helianthus annuus HOM05D000038 ORTHO05D000143 8.6e-12 74.3 131 36.6
SEGI_04295 Sequoiadendron giganteum HOM05D000038 ORTHO05D000143 7.3e-11 71.2 119 38.7
QL06p030017 Quercus lobata HOM05D000038 ORTHO05D000143 2.8e-10 69.3 128 37.5
Lj6P602T40 Lonicera japonica HOM05D000038 ORTHO05D000143 3.6e-10 68.9 51 64.7
Os04g0202300 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000143 4.7e-10 68.6 142 34.5
Gohir.A06G011100 Gossypium hirsutum HOM05D000038 ORTHO05D000143 6.1e-10 68.2 149 30.9
Gorai.010G011400 Gossypium raimondii HOM05D000038 ORTHO05D000143 8.0e-10 67.8 148 29.7
QL06p029875 Quercus lobata HOM05D000038 ORTHO05D000143 8.0e-10 67.8 129 36.4
HanXRQChr01g0021021 Helianthus annuus HOM05D000038 ORTHO05D000143 2.3e-09 66.2 133 33.1
Ciclev10014324m.g Citrus clementina HOM05D000038 ORTHO05D000143 4.0e-09 65.5 141 31.2
Manes.07G000900 Manihot esculenta HOM05D000038 ORTHO05D000143 6.8e-09 64.7 135 34.8
Ciclev10007028m.g Citrus clementina HOM05D000038 ORTHO05D000143 8.9e-09 64.3 127 33.1
vmacro12706 Vaccinium macrocarpon HOM05D000038 ORTHO05D000143 8.9e-09 64.3 142 30.3
FAN11G2814 Fragaria x ananassa HOM05D000038 ORTHO05D000143 1.2e-08 63.9 143 30.8
HanXRQChr01g0021061 Helianthus annuus HOM05D000038 ORTHO05D000143 1.2e-08 63.9 134 35.8
ECA248G3202 Erigeron canadensis HOM05D000038 ORTHO05D000143 2.0e-08 63.2 90 34.4
Potri.003G212000 Populus trichocarpa HOM05D000038 ORTHO05D000143 2.6e-08 62.8 126 31.0
MBI01_g36099_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 3.4e-08 62.4 144 33.3
Nn1g06135 Nelumbo nucifera HOM05D000038 ORTHO05D000143 3.4e-08 62.4 158 31.6
ATR0772G030 Amborella trichopoda HOM05D000038 ORTHO05D000143 4.4e-08 62.0 138 35.5
ECA248G1858 Erigeron canadensis HOM05D000038 ORTHO05D000143 4.4e-08 62.0 89 37.1
Os04g0202500 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000143 4.4e-08 62.0 142 31.7
QL06p029870 Quercus lobata HOM05D000038 ORTHO05D000143 4.4e-08 62.0 131 35.1
Haze_21747 Corylus avellana HOM05D000038 ORTHO05D000143 7.5e-08 61.2 127 30.7
FvH4_3g43403 Fragaria vesca HOM05D000038 ORTHO05D000143 7.5e-08 61.2 143 30.1
Lsat_1_v5_gn_1_68160 Lactuca sativa HOM05D000038 ORTHO05D000143 7.5e-08 61.2 139 31.7
Medtr4g114270 Medicago truncatula HOM05D000038 ORTHO05D000143 7.5e-08 61.2 132 31.8
RcHm_v2.0_Chr5g0077671 Rosa chinensis HOM05D000038 ORTHO05D000143 7.5e-08 61.2 145 29.7
HanXRQChr01g0021231 Helianthus annuus HOM05D000038 ORTHO05D000143 9.8e-08 60.8 118 35.6
Lsat_1_v5_gn_6_94581 Lactuca sativa HOM05D000038 ORTHO05D000143 9.8e-08 60.8 120 32.5
Sabra03G0154300 Salix brachista HOM05D000038 ORTHO05D000143 9.8e-08 60.8 143 30.8
Sed0022720 Sechium edule HOM05D000038 ORTHO05D000143 9.8e-08 60.8 133 33.8
ATR0772G164 Amborella trichopoda HOM05D000038 ORTHO05D000143 1.7e-07 60.1 143 30.1
ECA248G0790 Erigeron canadensis HOM05D000038 ORTHO05D000143 1.7e-07 60.1 132 34.8
Os04g0201900 Oryza sativa ssp. japonica HOM05D000038 ORTHO05D000143 1.7e-07 60.1 135 34.1
RcHm_v2.0_Chr5g0077411 Rosa chinensis HOM05D000038 ORTHO05D000143 1.7e-07 60.1 131 31.3
Sabra03G0156600 Salix brachista HOM05D000038 ORTHO05D000143 1.7e-07 60.1 143 30.8
Sabra03G0156800 Salix brachista HOM05D000038 ORTHO05D000143 1.7e-07 60.1 143 30.8
Sabra03G0157000 Salix brachista HOM05D000038 ORTHO05D000143 1.7e-07 60.1 143 30.8
Sabra03G0157700 Salix brachista HOM05D000038 ORTHO05D000143 1.7e-07 60.1 143 30.8
Sabra03G0154800 Salix brachista HOM05D000038 ORTHO05D000143 2.2e-07 59.7 139 31.7
Sabra03G0154500 Salix brachista HOM05D000038 ORTHO05D000143 2.9e-07 59.3 154 30.5
Lsat_1_v5_gn_1_68181 Lactuca sativa HOM05D000038 ORTHO05D000143 3.7e-07 58.9 127 31.5
Sabra03G0154600 Salix brachista HOM05D000038 ORTHO05D000143 3.7e-07 58.9 132 33.3
Lsat_1_v5_gn_1_66460 Lactuca sativa HOM05D000038 ORTHO05D000143 4.9e-07 58.5 137 31.4
Lsat_1_v5_gn_1_66741 Lactuca sativa HOM05D000038 ORTHO05D000143 4.9e-07 58.5 134 30.6
Sabra03G0155100 Salix brachista HOM05D000038 ORTHO05D000143 4.9e-07 58.5 141 31.9
Nn2g15643 Nelumbo nucifera HOM05D000038 ORTHO05D000143 6.4e-07 58.2 136 28.7
PGSC0003DMG400018452 Solanum tuberosum HOM05D000038 ORTHO05D000143 8.3e-07 57.8 134 28.4
Lsat_1_v5_gn_1_68080 Lactuca sativa HOM05D000038 ORTHO05D000143 1.1e-06 57.4 136 30.1
Lj6P601T14 Lonicera japonica HOM05D000038 ORTHO05D000143 1.1e-06 57.4 51 56.9
Sabra03G0158200 Salix brachista HOM05D000038 ORTHO05D000143 1.1e-06 57.4 140 32.9
Solyc03g078370.1 Solanum lycopersicum HOM05D000038 ORTHO05D000143 1.1e-06 57.4 134 30.6
Sopen03g021160 Solanum pennellii HOM05D000038 ORTHO05D000143 1.1e-06 57.4 134 30.6
Haze_06146 Corylus avellana HOM05D000038 ORTHO05D000143 1.4e-06 57.0 123 29.3
ECA248G2662 Erigeron canadensis HOM05D000038 ORTHO05D000143 1.4e-06 57.0 129 30.2
MBI04_g14208_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 1.9e-06 56.6 138 30.4
MBI04_g32786_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 1.9e-06 56.6 131 33.6
MBI17_g19516_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 1.9e-06 56.6 138 30.4
Nn7g36029 Nelumbo nucifera HOM05D000038 ORTHO05D000143 1.9e-06 56.6 128 30.5
Sed0012902 Sechium edule HOM05D000038 ORTHO05D000143 1.9e-06 56.6 135 30.4
Actinidia06672 Actinidia chinensis HOM05D000038 ORTHO05D000143 2.4e-06 56.2 164 28.0
Ciclev10017506m.g Citrus clementina HOM05D000038 ORTHO05D000143 2.4e-06 56.2 125 29.6
HanXRQChr01g0021051 Helianthus annuus HOM05D000038 ORTHO05D000143 2.4e-06 56.2 134 32.8
Sabra03G0157400 Salix brachista HOM05D000038 ORTHO05D000143 2.4e-06 56.2 148 31.8
Sabra03G0157500 Salix brachista HOM05D000038 ORTHO05D000143 2.4e-06 56.2 146 31.5
Eucgr.H04917 Eucalyptus grandis HOM05D000038 ORTHO05D000143 3.2e-06 55.8 123 30.9
PGR102G1216 Punica granatum HOM05D000038 ORTHO05D000143 3.2e-06 55.8 135 31.1
TAR362G0886 Trochodendron aralioides HOM05D000038 ORTHO05D000143 3.2e-06 55.8 33 63.6
Aqoxy2G01059 Aquilegia oxysepala HOM05D000038 ORTHO05D000143 4.1e-06 55.5 102 34.3
MBI01_g20392_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 4.1e-06 55.5 106 32.1
Sabra03G0156700 Salix brachista HOM05D000038 ORTHO05D000143 4.1e-06 55.5 149 30.9
Sabra03G0157100 Salix brachista HOM05D000038 ORTHO05D000143 4.1e-06 55.5 149 30.9
Sabra03G0157600 Salix brachista HOM05D000038 ORTHO05D000143 4.1e-06 55.5 154 30.5
vmacro12705 Vaccinium macrocarpon HOM05D000038 ORTHO05D000143 4.1e-06 55.5 113 33.6
Nn2g15637 Nelumbo nucifera HOM05D000038 ORTHO05D000143 5.4e-06 55.1 145 32.4
Dinv05693 Davidia involucrata HOM05D000038 ORTHO05D000143 7.0e-06 54.7 127 31.5
Nn3g18433 Nelumbo nucifera HOM05D000038 ORTHO05D009636 7.0e-06 54.7 61 36.1
Nn7g37459 Nelumbo nucifera HOM05D000038 ORTHO05D009636 9.2e-06 54.3 61 36.1
Sopen01g009210 Solanum pennellii HOM05D000038 ORTHO05D000143 9.2e-06 54.3 127 29.1


User provided reference genes

Program Settings