Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13956 Davidia involucrata HOM05D000088 ORTHO05D001030 1.9e-107 392.5 195 100.0
Duzib192G1011 Durio zibethinus HOM05D000088 ORTHO05D001030 4.4e-32 142.1 83 84.3
COL.COLO4_31860 Corchorus olitorius HOM05D000088 ORTHO05D001030 9.9e-32 141.0 83 84.3
Cpa.g.sc75.121 Carica papaya HOM05D000088 ORTHO05D001030 6.4e-31 138.3 83 81.9
Ciclev10015659m.g Citrus clementina HOM05D000088 ORTHO05D001030 6.4e-31 138.3 83 81.9
Thecc.06G231300 Theobroma cacao HOM05D000088 ORTHO05D001030 6.4e-31 138.3 83 83.1
Duzib160G0922 Durio zibethinus HOM05D000088 ORTHO05D001030 1.1e-30 137.5 84 83.3
Atru.chr1.2491 Acer truncatum HOM05D000088 ORTHO05D001030 1.9e-30 136.7 83 80.7
Eucgr.D01384 Eucalyptus grandis HOM05D000088 ORTHO05D001030 5.4e-30 135.2 83 79.5
RcHm_v2.0_Chr5g0001701 Rosa chinensis HOM05D000088 ORTHO05D001030 7.1e-30 134.8 83 81.9
Haze_06899 Corylus avellana HOM05D000088 ORTHO05D001030 9.3e-30 134.4 83 80.7
Dinv07386 Davidia involucrata HOM05D000088 ORTHO05D001030 3.5e-29 132.5 84 81.0
Manes.16G001500 Manihot esculenta HOM05D000088 ORTHO05D001030 3.5e-29 132.5 83 79.5
Duzib235G1532 Durio zibethinus HOM05D000088 ORTHO05D001030 4.6e-29 132.1 83 79.5
Cfa000122 Carpinus fangiana HOM05D000088 ORTHO05D001030 6.0e-29 131.7 83 80.7
MD05G1356400 Malus domestica HOM05D000088 ORTHO05D001030 3.0e-28 129.4 84 79.8
FAN21G2480 Fragaria x ananassa HOM05D000088 ORTHO05D001030 6.6e-28 128.3 84 79.8
FAN25G1268 Fragaria x ananassa HOM05D000088 ORTHO05D001030 6.6e-28 128.3 84 79.8
Gohir.A06G152500 Gossypium hirsutum HOM05D000088 ORTHO05D001030 6.6e-28 128.3 83 78.3
Gohir.D06G158800 Gossypium hirsutum HOM05D000088 ORTHO05D001030 6.6e-28 128.3 83 78.3
Gorai.010G185600 Gossypium raimondii HOM05D000088 ORTHO05D001030 6.6e-28 128.3 83 78.3
Prupe.4G012600 Prunus persica HOM05D000088 ORTHO05D001030 6.6e-28 128.3 83 77.1
CiPaw.09G100500 Carya illinoinensis HOM05D000088 ORTHO05D001030 8.7e-28 127.9 83 79.5
Sabra04G0000800 Salix brachista HOM05D000088 ORTHO05D001030 8.7e-28 127.9 83 77.1
Actinidia02327 Actinidia chinensis HOM05D000088 ORTHO05D001030 1.1e-27 127.5 83 77.1
Potri.011G022800 Populus trichocarpa HOM05D000088 ORTHO05D001030 1.1e-27 127.5 83 74.7
FvH4_3g01140 Fragaria vesca HOM05D000088 ORTHO05D001030 1.5e-27 127.1 84 78.6
Phvul.003G082800 Phaseolus vulgaris HOM05D000088 ORTHO05D001030 1.9e-27 126.7 87 75.9
MELO3C007427.2 Cucumis melo HOM05D000088 ORTHO05D001030 2.5e-27 126.3 83 74.7
Sed0013456 Sechium edule HOM05D000088 ORTHO05D001030 2.5e-27 126.3 83 75.9
CsaV3_6G048590 Cucumis sativus L. HOM05D000088 ORTHO05D001030 3.3e-27 125.9 83 74.7
DCAR_004871 Daucus carota HOM05D000088 ORTHO05D001030 3.3e-27 125.9 83 75.9
PGR004G0007 Punica granatum HOM05D000088 ORTHO05D001030 3.3e-27 125.9 86 75.6
TAR626G1884 Trochodendron aralioides HOM05D000088 ORTHO05D001030 3.3e-27 125.9 83 74.7
QL10p003463 Quercus lobata HOM05D000088 ORTHO05D001030 4.3e-27 125.6 83 77.1
ClCG01G021570 Citrullus lanatus HOM05D000088 ORTHO05D001030 5.6e-27 125.2 83 73.5
Cc09_g01010 Coffea canephora HOM05D000088 ORTHO05D001030 9.6e-27 124.4 84 77.4
DCAR_002214 Daucus carota HOM05D000088 ORTHO05D001030 9.6e-27 124.4 84 76.2
QL03p008454 Quercus lobata HOM05D000088 ORTHO05D001030 9.6e-27 124.4 83 75.9
CSS0047284 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D001030 1.3e-26 124.0 80 77.5
Glyma.07G264700 Glycine max HOM05D000088 ORTHO05D001030 1.3e-26 124.0 87 74.7
Glyma.17G009300 Glycine max HOM05D000088 ORTHO05D001030 1.3e-26 124.0 87 74.7
Gohir.D10G009600 Gossypium hirsutum HOM05D000088 ORTHO05D001030 1.6e-26 123.6 84 75.0
Gorai.011G010500 Gossypium raimondii HOM05D000088 ORTHO05D001030 1.6e-26 123.6 84 75.0
Potri.004G001900 Populus trichocarpa HOM05D000088 ORTHO05D001030 2.8e-26 122.9 83 74.7
arahy.Tifrunner.gnm1.ann1.KD656J Arachis hypogaea HOM05D000088 ORTHO05D001030 4.8e-26 122.1 87 72.4
arahy.Tifrunner.gnm1.ann1.MA69BJ Arachis hypogaea HOM05D000088 ORTHO05D001030 4.8e-26 122.1 87 72.4
Gohir.A10G009900 Gossypium hirsutum HOM05D000088 ORTHO05D001030 4.8e-26 122.1 84 73.8
VMungo1215G2399 Vigna mungo HOM05D000088 ORTHO05D001030 4.8e-26 122.1 87 72.4
Migut.H01599 Erythranthe guttata HOM05D000088 ORTHO05D001030 8.1e-26 121.3 83 71.1
Oeu049724.1 Olea europaea HOM05D000088 ORTHO05D001030 8.1e-26 121.3 83 73.5
Lj4g0018257 Lotus japonicus HOM05D000088 ORTHO05D001030 5.3e-25 118.6 85 72.9
Nitab4.5_0000574g0270 Nicotiana tabacum HOM05D000088 ORTHO05D001030 5.3e-25 118.6 85 72.9
Nitab4.5_0008006g0020 Nicotiana tabacum HOM05D000088 ORTHO05D001030 5.3e-25 118.6 85 72.9
CiPaw.10G076500 Carya illinoinensis HOM05D000088 ORTHO05D001030 9.0e-25 117.9 83 72.3
TWI38G1928 Tripterygium wilfordii HOM05D000088 ORTHO05D001030 9.0e-25 117.9 83 73.5
Lj1A1238T59 Lonicera japonica HOM05D000088 ORTHO05D001030 1.5e-24 117.1 68 85.3
CAN.G1186.17 Capsicum annuum HOM05D000088 ORTHO05D001030 2.0e-24 116.7 85 74.1
Rhsim02G0104100 Rhododendron simsii HOM05D000088 ORTHO05D001030 2.0e-24 116.7 87 71.3
Peaxi162Scf00442g00525 Petunia axillaris HOM05D000088 ORTHO05D001030 2.6e-24 116.3 84 72.6
MSTRG.14618 Avicennia marina HOM05D000088 ORTHO05D001030 3.4e-24 115.9 83 69.9
Sed0027726 Sechium edule HOM05D000088 ORTHO05D001030 3.4e-24 115.9 83 71.1
vmacro15779 Vaccinium macrocarpon HOM05D000088 ORTHO05D001030 3.4e-24 115.9 86 70.9
HanXRQChr15g0470831 Helianthus annuus HOM05D000088 ORTHO05D001030 4.5e-24 115.5 83 72.3
Oeu003170.1 Olea europaea HOM05D000088 ORTHO05D001030 5.8e-24 115.2 83 73.5
Lj6g0011802 Lotus japonicus HOM05D000088 ORTHO05D001030 7.6e-24 114.8 84 70.2
Solyc04g014690.3 Solanum lycopersicum HOM05D000088 ORTHO05D001030 7.6e-24 114.8 86 72.1
Sopen04g006790 Solanum pennellii HOM05D000088 ORTHO05D001030 7.6e-24 114.8 86 72.1
CANSAT56G1021 Cannabis sativa HOM05D000088 ORTHO05D001030 9.9e-24 114.4 84 72.6
Solyc11g012050.1 Solanum lycopersicum HOM05D000088 ORTHO05D001030 9.9e-24 114.4 85 72.9
Sopen11g006840 Solanum pennellii HOM05D000088 ORTHO05D001030 9.9e-24 114.4 85 72.9
MD10G1329500 Malus domestica HOM05D000088 ORTHO05D001030 1.3e-23 114.0 84 72.6
Lsat_1_v5_gn_7_13361 Lactuca sativa HOM05D000088 ORTHO05D001030 4.9e-23 112.1 84 71.4
Nitab4.5_0000143g0460 Nicotiana tabacum HOM05D000088 ORTHO05D001030 1.1e-22 110.9 85 71.8
Actinidia26873 Actinidia chinensis HOM05D000088 ORTHO05D001030 1.4e-22 110.5 83 67.5
CAN.G60.1 Capsicum annuum HOM05D000088 ORTHO05D001030 1.4e-22 110.5 85 71.8
CSS0020426 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D001030 1.9e-22 110.2 89 68.5
Aqoxy1G04155 Aquilegia oxysepala HOM05D000127 ORTHO05D001030 4.2e-22 109.0 83 68.7
Lalb_Chr15g0087891 Lupinus albus HOM05D000088 ORTHO05D001030 5.4e-22 108.6 87 71.3
Peaxi162Scf00558g00116 Petunia axillaris HOM05D000088 ORTHO05D001030 1.2e-21 107.5 86 68.6
Sc05g0009550 Simmondsia chinensis HOM05D000088 ORTHO05D001030 2.7e-21 106.3 86 65.1
Lalb_Chr18g0056881 Lupinus albus HOM05D000088 ORTHO05D001030 6.0e-21 105.1 89 67.4
Psat4g003560 Pisum sativum HOM05D000088 ORTHO05D001030 7.9e-21 104.8 89 64.0
ECA100G0003 Erigeron canadensis HOM05D000088 ORTHO05D001030 1.0e-20 104.4 75 74.7
TPR.G37119 Trifolium pratense HOM05D000088 ORTHO05D001030 1.3e-20 104.0 89 65.2
TWI63G1142 Tripterygium wilfordii HOM05D000088 ORTHO05D001030 1.3e-20 104.0 83 67.5
Hund23412 Selenicereus undatus HOM05D000088 ORTHO05D001030 1.8e-20 103.6 86 68.6
Medtr4g132860 Medicago truncatula HOM05D000088 ORTHO05D001030 2.3e-20 103.2 87 64.4
CARHR049530 Cardamine hirsuta HOM05D000088 ORTHO05D001030 3.9e-20 102.4 93 59.1
A09p13100 Brassica napus HOM05D000088 ORTHO05D001030 5.1e-20 102.1 93 59.1
BcaC04g22768 Brassica carinata HOM05D000088 ORTHO05D001030 6.7e-20 101.7 93 58.1
C09p15510 Brassica napus HOM05D000088 ORTHO05D001030 6.7e-20 101.7 93 58.1
BolC9t54456H Brassica oleracea HOM05D000088 ORTHO05D001030 6.7e-20 101.7 93 58.1
BraA09t36954Z Brassica rapa HOM05D000088 ORTHO05D001030 6.7e-20 101.7 93 59.1
Thhalv10023512m.g Eutrema salsugineum HOM05D000088 ORTHO05D001030 6.7e-20 101.7 93 58.1
SGA_v2.0_scaffold89G27494 Striga asiatica HOM05D000088 ORTHO05D001030 6.7e-20 101.7 84 61.9
AT1G62400 Arabidopsis thaliana HOM05D000088 ORTHO05D001030 1.1e-19 100.9 93 58.1
Nn1g03352 Nelumbo nucifera HOM05D000088 ORTHO05D001030 1.1e-19 100.9 83 66.3
Ca_21052_v3 Cicer arietinum L. HOM05D000088 ORTHO05D001030 3.3e-19 99.4 88 62.5
Sp2g02210 Schrenkiella parvula HOM05D000088 ORTHO05D001030 7.4e-19 98.2 93 55.9
Aa31LG2G110 Aethionema arabicum HOM05D000088 ORTHO05D001030 9.6e-19 97.8 93 58.1
BcaC02g10467 Brassica carinata HOM05D000088 ORTHO05D001030 4.8e-18 95.5 90 60.0
C04p28550 Brassica napus HOM05D000088 ORTHO05D001030 4.8e-18 95.5 90 60.0
BolC4t24399H Brassica oleracea HOM05D000088 ORTHO05D001030 4.8e-18 95.5 90 60.0
BraA09t37267Z Brassica rapa HOM05D000088 ORTHO05D001030 4.8e-18 95.5 91 59.3
A09p16290 Brassica napus HOM05D000088 ORTHO05D001030 6.2e-18 95.1 93 57.0
Phvul.006G144200 Phaseolus vulgaris HOM05D000088 ORTHO05D001030 6.2e-18 95.1 87 63.2
BcaB07g31324 Brassica carinata HOM05D000088 ORTHO05D001030 8.1e-18 94.7 91 59.3
Carub.0002s0258 Capsella rubella HOM05D000088 ORTHO05D001030 8.1e-18 94.7 94 57.4
BcaC04g22396 Brassica carinata HOM05D000088 ORTHO05D001030 1.1e-17 94.4 91 59.3
C09p19800 Brassica napus HOM05D000088 ORTHO05D001030 1.1e-17 94.4 91 59.3
BolC9t54882H Brassica oleracea HOM05D000088 ORTHO05D001030 1.1e-17 94.4 91 59.3
Nitab4.5_0001198g0210 Nicotiana tabacum HOM05D000088 ORTHO05D001030 1.1e-17 94.4 62 77.4
EL10Ac5g12878 Beta vulgaris HOM05D000088 ORTHO05D001030 2.4e-17 93.2 90 58.9
Glyma.15G113500 Glycine max HOM05D000088 ORTHO05D001030 4.5e-16 89.0 88 61.4
Lalb_Chr07g0177021 Lupinus albus HOM05D000088 ORTHO05D001030 9.9e-16 87.8 50 84.0
PGSC0003DMG401013267 Solanum tuberosum HOM05D000088 ORTHO05D001030 2.9e-15 86.3 48 83.3
Glyma.09G009100 Glycine max HOM05D000088 ORTHO05D001030 6.4e-15 85.1 88 60.2
Medtr4g008020 Medicago truncatula HOM05D000088 ORTHO05D001030 1.4e-14 84.0 48 85.4
PSO210G2529 Papaver somniferum HOM05D000088 ORTHO05D001030 3.2e-14 82.8 80 58.8
PSO832G1843 Papaver somniferum HOM05D000088 ORTHO05D001030 3.2e-14 82.8 80 58.8
AL2G13490 Arabidopsis lyrata HOM05D000088 ORTHO05D001030 7.1e-14 81.6 48 79.2
Ah.12g052250 Amaranthus hybridus HOM05D000088 ORTHO05D001030 9.3e-14 81.3 79 53.2
AUR62010804 Chenopodium quinoa HOM05D000088 ORTHO05D001030 1.6e-13 80.5 90 54.4
AUR62019801 Chenopodium quinoa HOM05D000088 ORTHO05D001030 1.6e-13 80.5 90 54.4
PGSC0003DMG400023610 Solanum tuberosum HOM05D000088 ORTHO05D001030 4.6e-13 79.0 49 79.6
Oeu002756.2 Olea europaea HOM05D000088 ORTHO05D001030 5.1e-12 75.5 48 79.2
Oeu003026.1 Olea europaea HOM05D000088 ORTHO05D001030 9.6e-11 71.2 48 77.1
VMungo0540G1560 Vigna mungo HOM05D000088 ORTHO05D001030 4.8e-10 68.9 85 51.8
Solyc12g038840.2 Solanum lycopersicum HOM05D004082 ORTHO05D004729 8.2e-10 68.2 47 68.1
HPP92_004749 Vanilla planifolia HOM05D000088 ORTHO05D001030 3.1e-09 66.2 95 46.3
HPP92_004754 Vanilla planifolia HOM05D000088 ORTHO05D001030 3.1e-09 66.2 95 46.3
MBI19_g29449_MAGBIO Magnolia biondii HOM05D000088 ORTHO05D001030 5.5e-06 55.5 81 43.2
Zm00001eb275520 Zea mays HOM05D000088 ORTHO05D001030 5.5e-06 55.5 59 50.8
CDE07G0367 Ceratophyllum demersum HOM05D000088 ORTHO05D001030 7.1e-06 55.1 79 44.3


User provided reference genes

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