Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13905 Davidia involucrata HOM05D004937 ORTHO05D006414 1.7e-72 275.8 127 100.0
Lj1A1232T94 Lonicera japonica HOM05D004937 ORTHO05D006414 8.4e-48 193.7 97 85.6
Cc09_g01540 Coffea canephora HOM05D004937 ORTHO05D000904 1.1e-47 193.4 99 85.9
Haze_06813 Corylus avellana HOM05D004937 ORTHO05D006414 1.1e-47 193.4 106 79.2
TAR624G0274 Trochodendron aralioides HOM05D004937 ORTHO05D006414 1.1e-47 193.4 101 84.2
vmacro15793 Vaccinium macrocarpon HOM05D004937 ORTHO05D006414 1.4e-47 193.0 99 83.8
QL05p072835 Quercus lobata HOM05D004937 ORTHO05D006414 1.9e-47 192.6 99 83.8
CSS0033735 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 3.2e-47 191.8 99 85.9
Ciclev10014440m.g Citrus clementina HOM05D004937 ORTHO05D006414 4.2e-47 191.4 103 81.6
Sabra04G0005400 Salix brachista HOM05D004937 ORTHO05D006414 4.2e-47 191.4 104 78.8
Hma1.2p1_3370F.1_g335650 Hydrangea macrophylla HOM05D004937 ORTHO05D006414 5.4e-47 191.0 99 85.9
Potri.004G010400 Populus trichocarpa HOM05D004937 ORTHO05D006414 5.4e-47 191.0 104 77.9
CiPaw.09G093200 Carya illinoinensis HOM05D004937 ORTHO05D006414 1.2e-46 189.9 103 81.6
Rhsim02G0106300 Rhododendron simsii HOM05D004937 ORTHO05D006414 2.1e-46 189.1 99 81.8
GSVIVG01012711001 Vitis vinifera HOM05D004937 ORTHO05D000904 2.1e-46 189.1 103 81.6
Thecc.06G222700 Theobroma cacao HOM05D004937 ORTHO05D006414 7.8e-46 187.2 102 80.4
Manes.16G005800 Manihot esculenta HOM05D004937 ORTHO05D006414 2.3e-45 185.7 109 78.0
PGR042G1615 Punica granatum HOM05D004937 ORTHO05D006414 3.9e-45 184.9 103 77.7
TWI63G0901 Tripterygium wilfordii HOM05D004937 ORTHO05D006414 5.1e-45 184.5 102 80.4
CANSAT56G3877 Cannabis sativa HOM05D004937 ORTHO05D006414 6.6e-45 184.1 99 80.8
Peaxi162Scf00394g00019 Petunia axillaris HOM05D004937 ORTHO05D006414 1.1e-44 183.3 106 76.4
Lj4g0022599 Lotus japonicus HOM05D004937 ORTHO05D006414 1.5e-44 183.0 103 76.7
MELO3C002448.2 Cucumis melo HOM05D004937 ORTHO05D006414 3.3e-44 181.8 108 74.1
Glyma.07G261700 Glycine max HOM05D004937 ORTHO05D006414 3.3e-44 181.8 101 76.2
Nitab4.5_0011734g0010 Nicotiana tabacum HOM05D004937 ORTHO05D006414 7.3e-44 180.6 102 78.4
ClCG03G004640 Citrullus lanatus HOM05D004937 ORTHO05D006414 9.6e-44 180.3 101 77.2
Peaxi162Scf00307g01425 Petunia axillaris HOM05D004937 ORTHO05D006414 9.6e-44 180.3 106 76.4
Prupe.4G019000 Prunus persica HOM05D004937 ORTHO05D006414 9.6e-44 180.3 101 78.2
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 1.3e-43 179.9 108 73.1
DCAR_028195 Daucus carota HOM05D004937 ORTHO05D006414 1.6e-43 179.5 98 81.6
DCAR_024931 Daucus carota HOM05D004937 ORTHO05D006414 2.1e-43 179.1 99 77.8
QL05p072848 Quercus lobata HOM05D004937 ORTHO05D006414 2.1e-43 179.1 108 73.1
Eucgr.D01342 Eucalyptus grandis HOM05D004937 ORTHO05D006414 3.6e-43 178.3 98 80.6
CsaV3_1G010670 Cucumis sativus L. HOM05D004937 ORTHO05D006414 4.8e-43 177.9 101 75.2
Cpa.g.sc152.26 Carica papaya HOM05D004937 ORTHO05D006414 8.1e-43 177.2 98 79.6
COL.COLO4_31792 Corchorus olitorius HOM05D004937 ORTHO05D006414 8.1e-43 177.2 102 76.5
Nitab4.5_0000005g0300 Nicotiana tabacum HOM05D004937 ORTHO05D006414 8.1e-43 177.2 102 77.5
Glyma.17G012400 Glycine max HOM05D004937 ORTHO05D006414 1.1e-42 176.8 101 74.3
MD10G1323300 Malus domestica HOM05D004937 ORTHO05D006414 1.1e-42 176.8 101 76.2
PSO675G1521 Papaver somniferum HOM05D004937 ORTHO05D006414 1.1e-42 176.8 103 75.7
CDE02G2441 Ceratophyllum demersum HOM05D004937 ORTHO05D006414 1.4e-42 176.4 99 78.8
VMungo1215G2760 Vigna mungo HOM05D004937 ORTHO05D006414 1.4e-42 176.4 101 76.2
Nn1g07169 Nelumbo nucifera HOM05D004937 ORTHO05D006414 1.8e-42 176.0 95 83.2
PSO541G5924 Papaver somniferum HOM05D004937 ORTHO05D006414 1.8e-42 176.0 103 75.7
CSS0005056 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 2.4e-42 175.6 97 80.4
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 3.1e-42 175.3 105 74.3
Sc24g0000210 Simmondsia chinensis HOM05D004937 ORTHO05D006414 9.0e-42 173.7 98 75.5
Phvul.003G080000 Phaseolus vulgaris HOM05D004937 ORTHO05D006414 1.2e-41 173.3 99 75.8
Medtr4g132300 Medicago truncatula HOM05D004937 ORTHO05D006414 1.5e-41 172.9 99 76.8
RcHm_v2.0_Chr5g0002731 Rosa chinensis HOM05D004937 ORTHO05D006414 1.5e-41 172.9 99 77.8
Hund23457 Selenicereus undatus HOM05D004937 ORTHO05D006414 2.0e-41 172.6 99 76.8
Aqoxy1G02086 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 2.6e-41 172.2 97 77.3
MSTRG.15996 Avicennia marina HOM05D004937 ORTHO05D006414 5.8e-41 171.0 105 75.2
Ca_21076_v3 Cicer arietinum L. HOM05D004937 ORTHO05D006414 5.8e-41 171.0 101 74.3
ATR0794G089 Amborella trichopoda HOM05D004937 ORTHO05D006414 7.6e-41 170.6 104 69.2
FvH4_3g01860 Fragaria vesca HOM05D004937 ORTHO05D006414 9.9e-41 170.2 99 76.8
PSO675G7903 Papaver somniferum HOM05D004937 ORTHO05D006414 1.7e-40 169.5 103 73.8
Psat4g006200 Pisum sativum HOM05D004937 ORTHO05D006414 2.2e-40 169.1 99 72.7
Sed0013617 Sechium edule HOM05D004937 ORTHO05D006414 2.2e-40 169.1 101 74.3
unitig_748.g7590 Utricularia gibba HOM05D004937 ORTHO05D006414 2.2e-40 169.1 105 71.4
Gohir.D06G214000 Gossypium hirsutum HOM05D004937 ORTHO05D006414 3.8e-40 168.3 102 70.6
Gorai.010G252100 Gossypium raimondii HOM05D004937 ORTHO05D006414 3.8e-40 168.3 102 70.6
EL10Ac8g20076 Beta vulgaris HOM05D004937 ORTHO05D006414 6.4e-40 167.5 99 73.7
AUR62012723 Chenopodium quinoa HOM05D004937 ORTHO05D006414 6.4e-40 167.5 97 74.2
HanXRQChr15g0470651 Helianthus annuus HOM05D004937 ORTHO05D006414 8.4e-40 167.2 103 70.9
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 8.4e-40 167.2 109 67.9
Migut.M01330 Erythranthe guttata HOM05D004937 ORTHO05D000904 1.1e-39 166.8 105 73.3
PGSC0003DMG400019871 Solanum tuberosum HOM05D004937 ORTHO05D006414 1.1e-39 166.8 106 70.8
AUR62021933 Chenopodium quinoa HOM05D004937 ORTHO05D006414 1.4e-39 166.4 97 73.2
FAN21G0664 Fragaria x ananassa HOM05D004937 ORTHO05D006414 1.4e-39 166.4 99 75.8
Sed0026378 Sechium edule HOM05D004937 ORTHO05D006414 1.4e-39 166.4 102 73.5
arahy.Tifrunner.gnm1.ann1.L1792D Arachis hypogaea HOM05D004937 ORTHO05D006414 1.9e-39 166.0 101 72.3
Sopen02g011270 Solanum pennellii HOM05D004937 ORTHO05D006414 2.4e-39 165.6 109 67.9
Dinv20060 Davidia involucrata HOM05D004937 ORTHO05D006414 4.2e-39 164.9 99 73.7
Gohir.A06G207300 Gossypium hirsutum HOM05D004937 ORTHO05D006414 4.2e-39 164.9 102 69.6
Solyc02g032870.4 Solanum lycopersicum HOM05D004937 ORTHO05D006414 4.2e-39 164.9 109 67.9
Lalb_Chr12g0196051 Lupinus albus HOM05D004937 ORTHO05D006414 5.4e-39 164.5 106 69.8
TPR.G22185 Trifolium pratense HOM05D004937 ORTHO05D006414 5.4e-39 164.5 101 71.3
Dinv13906 Davidia involucrata HOM05D004937 ORTHO05D006414 9.3e-39 163.7 97 70.1
Os12g0414900 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 9.3e-39 163.7 97 74.2
Zm00001eb048580 Zea mays HOM05D004937 ORTHO05D006414 1.6e-38 162.9 98 70.4
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 2.1e-38 162.5 99 67.7
ECA236G0630 Erigeron canadensis HOM05D004937 ORTHO05D006414 2.1e-38 162.5 106 66.0
Ah.14g087960 Amaranthus hybridus HOM05D004937 ORTHO05D006414 4.6e-38 161.4 99 69.7
PSO541G2704 Papaver somniferum HOM05D004937 ORTHO05D006414 6.0e-38 161.0 103 70.9
HanXRQChr05g0129391 Helianthus annuus HOM05D004937 ORTHO05D006414 7.9e-38 160.6 103 68.9
HPP92_001591 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.0e-37 160.2 104 69.2
HPP92_001597 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.0e-37 160.2 104 69.2
Lsat_1_v5_gn_7_16360 Lactuca sativa HOM05D004937 ORTHO05D006414 2.3e-37 159.1 103 68.9
SalBow8G2768 Salvia bowleyana HOM05D004937 ORTHO05D006414 2.3e-37 159.1 105 68.6
BcaB08g37427 Brassica carinata HOM05D004937 ORTHO05D006414 3.9e-37 158.3 109 62.4
BcaB08g37429 Brassica carinata HOM05D004937 ORTHO05D006414 3.9e-37 158.3 109 62.4
Aa31LG1G2970 Aethionema arabicum HOM05D004937 ORTHO05D006414 6.7e-37 157.5 104 67.3
PSO017G1772 Papaver somniferum HOM05D004937 ORTHO05D006414 1.1e-36 156.8 94 69.1
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 1.5e-36 156.4 109 62.4
Thhalv10006713m.g Eutrema salsugineum HOM05D004937 ORTHO05D000904 2.5e-36 155.6 102 65.7
Zm00001eb043220 Zea mays HOM05D004937 ORTHO05D006414 2.5e-36 155.6 99 67.7
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 3.3e-36 155.2 106 63.2
BraA09t41776Z Brassica rapa HOM05D004937 ORTHO05D006414 3.3e-36 155.2 106 63.2
SEGI_33731 Sequoiadendron giganteum HOM05D004937 ORTHO05D006414 7.4e-36 154.1 102 64.7
C08p47960 Brassica napus HOM05D004937 ORTHO05D006414 2.1e-35 152.5 106 62.3
BolC8t52333H Brassica oleracea HOM05D004937 ORTHO05D006414 2.1e-35 152.5 106 62.3
Lj2C267G4 Lonicera japonica HOM05D004937 ORTHO05D006414 2.1e-35 152.5 101 65.3
AT1G11800 Arabidopsis thaliana HOM05D004937 ORTHO05D006414 4.8e-35 151.4 109 62.4
Carub.0001s1147 Capsella rubella HOM05D004937 ORTHO05D006414 4.8e-35 151.4 109 62.4
SHI02217 Sapria himalayana HOM05D004937 ORTHO05D006414 1.1e-34 150.2 104 61.5
BcaB08g37425 Brassica carinata HOM05D004937 ORTHO05D006414 1.4e-34 149.8 109 60.6
Migut.M01331 Erythranthe guttata HOM05D004937 ORTHO05D006414 1.4e-34 149.8 98 65.3
AL1G22990 Arabidopsis lyrata HOM05D004937 ORTHO05D006414 2.4e-34 149.1 102 62.7
arahy.Tifrunner.gnm1.ann1.VWCB5J Arachis hypogaea HOM05D004937 ORTHO05D006414 1.2e-33 146.7 101 65.3
CARHR012140 Cardamine hirsuta HOM05D004937 ORTHO05D006414 1.5e-33 146.4 102 61.8
Sp1g10430 Schrenkiella parvula HOM05D004937 ORTHO05D006414 3.4e-33 145.2 102 60.8
THA.LOC104809500 Tarenaya hassleriana HOM05D004937 ORTHO05D006414 1.3e-32 143.3 104 61.5
Pp3c20_16850 Physcomitrium patens HOM05D004937 ORTHO05D006414 1.9e-31 139.4 97 64.9
CSS0029720 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 5.5e-31 137.9 111 60.4
Mapoly0028s0073 Marchantia polymorpha HOM05D004937 ORTHO05D006414 1.2e-30 136.7 102 58.8
HPP92_014181 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.2e-30 136.7 109 56.9
CBR_g38366 Chara braunii HOM05D004937 ORTHO05D006414 1.0e-29 133.7 105 59.0
AagrBONN_evm.TU.Sc2ySwM_368.2060 Anthoceros agrestis HOM05D004937 ORTHO05D006414 1.8e-29 132.9 102 60.8
Aqoxy3G03726 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.5e-28 129.8 100 60.0
CSS0048087 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 1.5e-28 129.8 104 59.6
SMO361G0593 Selaginella moellendorffii HOM05D004937 ORTHO05D006414 7.4e-28 127.5 103 61.2
Aqoxy4G00762 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.4e-26 123.2 100 58.0
Potri.004G010900 Populus trichocarpa HOM05D004937 ORTHO05D006414 1.0e-24 117.1 104 53.8
AagrBONN_evm.TU.Sc2ySwM_368.2061 Anthoceros agrestis HOM05D004937 ORTHO05D006414 2.5e-23 112.5 88 58.0
Aqoxy5G03390 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 2.3e-21 105.9 65 67.7
MCO11G820 Micromonas commoda HOM05D004937 ORTHO05D006414 5.9e-17 91.3 102 44.1
Cre06.g305050 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 3.8e-16 88.6 95 45.3
PRCOL_00004553 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 1.9e-15 86.3 99 42.4
Mapoly0074s0008 Marchantia polymorpha HOM05D004937 ORTHO05D006414 4.8e-11 71.6 102 38.2
PRCOL_00006577 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 4.8e-11 71.6 101 42.6
Os07g0510300 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 8.2e-11 70.9 104 37.5
Cre06.g305250 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 6.9e-10 67.8 132 31.8


User provided reference genes

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