Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13857 Davidia involucrata HOM05D001117 ORTHO05D000930 1.0e-68 263.8 133 100.0
Actinidia30497 Actinidia chinensis HOM05D001117 ORTHO05D000930 1.4e-30 137.1 134 58.2
Dinv02569 Davidia involucrata HOM05D001117 ORTHO05D000930 1.1e-27 127.5 72 84.7
Dinv12207 Davidia involucrata HOM05D001117 ORTHO05D000930 1.1e-27 127.5 72 84.7
CSS0045354 Camellia sinensis var. sinensis HOM05D001117 ORTHO05D000930 2.6e-24 116.3 120 55.8
CSS0048976 Camellia sinensis var. sinensis HOM05D001117 ORTHO05D000930 5.8e-24 115.2 124 58.1
Actinidia12477 Actinidia chinensis HOM05D001117 ORTHO05D000930 1.3e-18 97.4 124 51.6
TAR626G1563 Trochodendron aralioides HOM05D001117 ORTHO05D000930 1.6e-18 97.1 121 52.9
GSVIVG01000440001 Vitis vinifera HOM05D001117 ORTHO05D000930 4.8e-18 95.5 136 47.8
Lj8A119T45 Lonicera japonica HOM05D001117 ORTHO05D000930 8.1e-18 94.7 112 52.7
Nitab4.5_0004625g0020 Nicotiana tabacum HOM05D001117 ORTHO05D000930 2.3e-12 76.6 132 43.2
PGSC0003DMG400026181 Solanum tuberosum HOM05D001117 ORTHO05D000930 2.3e-12 76.6 129 38.8
Potri.001G414700 Populus trichocarpa HOM05D001117 ORTHO05D000930 1.3e-10 70.9 112 42.0
Sabra16G0272100 Salix brachista HOM05D001117 ORTHO05D000930 1.3e-10 70.9 117 41.9
Sabra16G0277100 Salix brachista HOM05D001117 ORTHO05D000930 1.3e-10 70.9 117 41.9
Nitab4.5_0004360g0050 Nicotiana tabacum HOM05D001117 ORTHO05D000930 2.8e-10 69.7 130 40.0
Sopen07g026690 Solanum pennellii HOM05D001117 ORTHO05D000930 2.8e-10 69.7 129 38.0
Cc05_g05670 Coffea canephora HOM05D001117 ORTHO05D000930 4.8e-10 68.9 123 44.7
GSVIVG01014471001 Vitis vinifera HOM05D001117 ORTHO05D000930 1.1e-09 67.8 129 44.2
Solyc07g053140.3 Solanum lycopersicum HOM05D001117 ORTHO05D000930 2.4e-09 66.6 129 38.0
Dinv08363 Davidia involucrata HOM05D000893 ORTHO05D000930 5.3e-09 65.5 125 43.2
Thecc.07G068500 Theobroma cacao HOM05D001117 ORTHO05D000930 5.3e-09 65.5 118 39.0
Duzib213G0543 Durio zibethinus HOM05D001117 ORTHO05D000930 6.9e-09 65.1 117 41.9
Sabra11G0112200 Salix brachista HOM05D001117 ORTHO05D000930 2.0e-08 63.5 121 38.0
CAN.G640.14 Capsicum annuum HOM05D001117 ORTHO05D000930 2.6e-08 63.2 123 35.0
Ciclev10009213m.g Citrus clementina HOM05D001117 ORTHO05D000930 3.4e-08 62.8 114 41.2
Atru.chr2.2943 Acer truncatum HOM05D001117 ORTHO05D000930 7.6e-08 61.6 118 42.4
Peaxi162Scf00007g01730 Petunia axillaris HOM05D001117 ORTHO05D000930 1.0e-07 61.2 132 40.2
QL08p035199 Quercus lobata HOM05D001117 ORTHO05D000930 1.3e-07 60.8 94 45.7
QL08p035981 Quercus lobata HOM05D001117 ORTHO05D000930 1.3e-07 60.8 94 45.7
Prupe.3G226900 Prunus persica HOM05D001117 ORTHO05D000930 1.7e-07 60.5 91 46.2
COL.COLO4_09503 Corchorus olitorius HOM05D001117 ORTHO05D000930 2.9e-07 59.7 115 37.4
CSS0042826 Camellia sinensis var. sinensis HOM05D001117 ORTHO05D000930 6.5e-07 58.5 122 36.1
PSO541G1682 Papaver somniferum HOM05D001117 ORTHO05D000930 6.5e-07 58.5 119 39.5
Manes.03G117900 Manihot esculenta HOM05D001117 ORTHO05D000930 8.4e-07 58.2 116 37.1
CiPaw.11G179100 Carya illinoinensis HOM05D001117 ORTHO05D000930 1.4e-06 57.4 109 38.5
Actinidia09934 Actinidia chinensis HOM05D001117 ORTHO05D000930 1.9e-06 57.0 111 37.8
Gohir.D05G362500 Gossypium hirsutum HOM05D001117 ORTHO05D000930 1.9e-06 57.0 111 37.8
Gorai.009G430000 Gossypium raimondii HOM05D001117 ORTHO05D000930 1.9e-06 57.0 111 37.8
Haze_09554 Corylus avellana HOM05D001117 ORTHO05D000930 3.2e-06 56.2 114 37.7
PSO675G8739 Papaver somniferum HOM05D001117 ORTHO05D000930 3.2e-06 56.2 119 38.7
Rhsim06G0191700 Rhododendron simsii HOM05D001117 ORTHO05D000930 7.1e-06 55.1 119 37.0


User provided reference genes

Program Settings