Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 9.1e-90 333.6 170 100.0
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 2.8e-59 232.3 150 80.7
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 7.0e-50 201.1 151 73.5
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 3.0e-48 195.7 122 84.4
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 5.6e-47 191.4 155 69.7
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 4.7e-46 188.3 158 67.1
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.8e-45 186.4 153 69.3
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 2.3e-45 186.0 156 69.2
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 3.1e-45 185.7 151 69.5
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 2.6e-44 182.6 153 68.0
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 4.4e-44 181.8 153 68.0
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.3e-43 180.3 164 63.4
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 1.7e-43 179.9 151 66.9
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 1.7e-43 179.9 153 67.3
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 2.9e-43 179.1 146 65.8
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 3.7e-43 178.7 150 65.3
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 3.7e-43 178.7 154 68.2
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 8.3e-43 177.6 160 65.0
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.4e-42 176.8 150 68.7
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 3.2e-42 175.6 156 65.4
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 4.1e-42 175.3 151 66.9
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 5.4e-42 174.9 145 64.8
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 7.0e-42 174.5 160 66.2
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.2e-41 173.7 151 64.9
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 1.2e-41 173.7 150 63.3
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 2.0e-41 172.9 148 64.2
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 2.7e-41 172.6 149 63.8
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.7e-41 172.6 153 68.0
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 4.6e-41 171.8 154 66.2
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.0e-41 171.4 147 65.3
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.0e-40 170.6 151 63.6
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 1.3e-40 170.2 147 66.0
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.7e-40 169.9 153 66.0
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 3.9e-40 168.7 149 61.7
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 5.0e-40 168.3 150 63.3
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 5.0e-40 168.3 153 66.0
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.0e-40 168.3 153 66.0
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 5.0e-40 168.3 152 65.1
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 6.6e-40 167.9 149 64.4
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.5e-39 166.8 149 61.1
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 1.9e-39 166.4 146 63.0
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 2.5e-39 166.0 149 60.4
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 2.5e-39 166.0 144 67.4
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 3.3e-39 165.6 156 60.9
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 3.3e-39 165.6 152 63.8
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 9.5e-39 164.1 146 61.6
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 9.5e-39 164.1 149 65.8
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 2.1e-38 162.9 146 61.0
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 2.8e-38 162.5 151 60.9
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 3.6e-38 162.2 177 54.8
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 4.7e-38 161.8 152 59.9
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 4.7e-38 161.8 151 59.6
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 6.2e-38 161.4 137 65.0
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.1e-37 160.6 151 58.9
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 1.4e-37 160.2 149 63.1
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 1.8e-37 159.8 151 60.9
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.8e-37 159.8 95 78.9
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 3.1e-37 159.1 149 61.7
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 8.9e-37 157.5 137 65.7
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 1.5e-36 156.8 147 61.2
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 2.0e-36 156.4 147 60.5
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 2.0e-36 156.4 149 57.7
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 1.3e-35 153.7 155 61.3
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.3e-35 153.7 143 62.9
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 1.7e-35 153.3 149 58.4
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 1.7e-35 153.3 147 60.5
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 2.9e-35 152.5 95 77.9
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 6.4e-35 151.4 95 76.8
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 1.1e-34 150.6 152 59.2
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 2.4e-34 149.4 154 56.5
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 2.4e-34 149.4 130 63.1
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 3.2e-34 149.1 147 58.5
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 3.2e-34 149.1 109 73.4
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 7.1e-34 147.9 110 69.1
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 9.2e-34 147.5 150 59.3
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 1.6e-33 146.7 146 59.6
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 1.6e-33 146.7 152 56.6
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 6.0e-33 144.8 150 58.0
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.3e-32 143.7 147 59.9
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 1.3e-32 143.7 147 59.9
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.7e-32 143.3 95 73.7
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 6.6e-32 141.4 155 55.5
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 1.9e-31 139.8 147 57.1
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.9e-31 139.8 81 81.5
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 2.5e-31 139.4 146 58.2
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 2.5e-31 139.4 147 57.1
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.3e-31 138.7 139 57.6
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.3e-31 138.7 146 58.2
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.3e-31 138.7 146 58.2
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 5.6e-31 138.3 147 55.8
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 5.6e-31 138.3 147 56.5
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 5.6e-31 138.3 153 55.6
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 9.5e-31 137.5 155 53.5
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.2e-30 137.1 163 52.1
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.6e-30 136.7 146 58.2
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 2.1e-30 136.3 141 58.9
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 3.6e-30 135.6 156 56.4
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 3.6e-30 135.6 150 55.3
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 4.7e-30 135.2 146 56.8
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.4e-29 133.7 146 56.8
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 5.2e-29 131.7 162 50.0
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.2e-28 130.6 114 60.5
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.5e-28 130.2 147 54.4
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.5e-28 130.2 159 52.2
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 2.0e-28 129.8 78 73.1
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 2.6e-28 129.4 101 62.4
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 1.3e-27 127.1 74 78.4
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 4.9e-27 125.2 139 54.0
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 5.4e-26 121.7 73 79.5
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 7.1e-26 121.3 85 70.6
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 9.2e-26 120.9 68 82.4
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 3.5e-25 119.0 67 83.6
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 3.0e-24 115.9 76 75.0
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 3.9e-24 115.5 117 59.0
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 1.9e-23 113.2 73 72.6
Hma1.2p1_3430F.1_g335990 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 1.6e-22 110.2 91 68.1
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 2.1e-22 109.8 73 74.0
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.8e-21 106.7 156 43.6
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 4.4e-20 102.1 67 67.2
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 9.9e-20 100.9 87 54.0
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.9e-18 96.7 130 50.0
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 3.2e-18 95.9 71 64.8
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 5.4e-18 95.1 165 44.2
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 9.3e-18 94.4 96 52.1
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 9.3e-18 94.4 82 51.2
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 6.0e-17 91.7 47 87.2
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 7.8e-17 91.3 71 57.7
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 1.3e-16 90.5 78 62.8
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.1e-15 87.4 112 48.2
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 3.4e-12 75.9 48 70.8
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 8.4e-11 71.2 69 49.3
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.1e-09 66.6 51 58.8
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 6.7e-08 61.6 80 52.5
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 1.9e-07 60.1 37 78.4
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 6.2e-06 55.1 67 41.8


User provided reference genes

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