Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13855 Davidia involucrata HOM05D002278 ORTHO05D007219 3.0e-99 365.2 181 100.0
Rhsim04G0058800 Rhododendron simsii HOM05D002278 ORTHO05D007219 4.9e-25 118.6 105 60.0
RhsimUnG0197700 Rhododendron simsii HOM05D002278 ORTHO05D007219 1.4e-24 117.1 105 59.0
CSS0029165 Camellia sinensis var. sinensis HOM05D002278 ORTHO05D007219 4.6e-23 112.1 104 58.7
CSS0031428 Camellia sinensis var. sinensis HOM05D002278 ORTHO05D007219 1.3e-22 110.5 104 57.7
Hma1.2p1_1090F.1_g255760 Hydrangea macrophylla HOM05D002278 ORTHO05D007219 6.2e-20 101.7 106 58.5
Cfa014493 Carpinus fangiana HOM05D002278 ORTHO05D007219 3.1e-19 99.4 101 53.5
Haze_13027 Corylus avellana HOM05D002278 ORTHO05D007219 1.2e-18 97.4 101 51.5
Atru.chr6.3096 Acer truncatum HOM05D002278 ORTHO05D007219 3.7e-17 92.4 104 48.1
TAR629G0894 Trochodendron aralioides HOM05D002278 ORTHO05D007219 4.9e-17 92.0 104 50.0
Actinidia30495 Actinidia chinensis HOM05D002278 ORTHO05D007219 1.1e-16 90.9 88 58.0
Dinv02571 Davidia involucrata HOM05D002278 ORTHO05D007219 1.9e-16 90.1 78 66.7
CiPaw.03G166700 Carya illinoinensis HOM05D002278 ORTHO05D007219 2.4e-16 89.7 101 48.5
Prupe.3G227100 Prunus persica HOM05D002278 ORTHO05D007219 1.6e-15 87.0 101 47.5
TAR627G1012 Trochodendron aralioides HOM05D002278 ORTHO05D007219 3.5e-15 85.9 104 46.2
Glyma.06G300800 Glycine max HOM05D002278 ORTHO05D007219 7.8e-15 84.7 104 43.3
Sabra19G0120100 Salix brachista HOM05D002278 ORTHO05D007219 1.7e-14 83.6 104 49.0
Sabra19G0133900 Salix brachista HOM05D002278 ORTHO05D007219 2.3e-14 83.2 104 49.0
QL08p036030 Quercus lobata HOM05D002278 ORTHO05D007219 3.9e-14 82.4 104 43.3
Potri.019G119300 Populus trichocarpa HOM05D002278 ORTHO05D007219 5.1e-14 82.0 104 47.1
Cpa.g.sc34.55 Carica papaya HOM05D002278 ORTHO05D007219 2.5e-13 79.7 101 48.5
GSVIVG01000442001 Vitis vinifera HOM05D002278 ORTHO05D007219 5.6e-13 78.6 101 42.6
Cc05_g05690 Coffea canephora HOM05D002278 ORTHO05D007219 2.1e-12 76.6 107 45.8
Nitab4.5_0006653g0060 Nicotiana tabacum HOM05D002278 ORTHO05D007219 2.1e-12 76.6 94 46.8
Sopen07g026740 Solanum pennellii HOM05D002278 ORTHO05D007219 2.1e-12 76.6 92 46.7
Manes.13G087750 Manihot esculenta HOM05D002278 ORTHO05D007219 2.8e-12 76.3 104 44.2
Glyma.12G103900 Glycine max HOM05D002278 ORTHO05D007219 8.1e-12 74.7 103 43.7
Solyc07g053180.3 Solanum lycopersicum HOM05D002278 ORTHO05D007219 8.1e-12 74.7 92 45.7
PGSC0003DMG400026180 Solanum tuberosum HOM05D002278 ORTHO05D007219 1.1e-11 74.3 92 44.6
Gohir.D02G185000 Gossypium hirsutum HOM05D002278 ORTHO05D007219 2.4e-11 73.2 105 42.9
Phvul.011G108900 Phaseolus vulgaris HOM05D002278 ORTHO05D007219 3.1e-11 72.8 104 44.2
Gorai.005G207300 Gossypium raimondii HOM05D002278 ORTHO05D007219 4.0e-11 72.4 105 42.9
Oeu025478.1 Olea europaea HOM05D002278 ORTHO05D007219 6.8e-11 71.6 103 40.8
Duzib052G1084 Durio zibethinus HOM05D002278 ORTHO05D007219 8.9e-11 71.2 105 41.9
Ciclev10018305m.g Citrus clementina HOM05D002278 ORTHO05D007219 1.2e-10 70.9 104 39.4
CANSAT64G1962 Cannabis sativa HOM05D002278 ORTHO05D007219 1.5e-10 70.5 105 39.0
Potri.013G150300 Populus trichocarpa HOM05D002278 ORTHO05D007219 2.0e-10 70.1 105 44.8
Nitab4.5_0008821g0020 Nicotiana tabacum HOM05D002278 ORTHO05D007219 2.6e-10 69.7 103 39.8
CAN.G640.24 Capsicum annuum HOM05D002278 ORTHO05D007219 3.4e-10 69.3 105 40.0
TWI18G0410 Tripterygium wilfordii HOM05D002278 ORTHO05D007219 4.4e-10 68.9 103 43.7
MSTRG.14169 Avicennia marina HOM05D002278 ORTHO05D007219 5.8e-10 68.6 105 41.0
Gohir.A03G161700 Gossypium hirsutum HOM05D002278 ORTHO05D007219 5.8e-10 68.6 105 41.0
RcHm_v2.0_Chr2g0161151 Rosa chinensis HOM05D002278 ORTHO05D007219 5.8e-10 68.6 101 43.6
VMungo1127G0648 Vigna mungo HOM05D002278 ORTHO05D007219 7.6e-10 68.2 105 39.0
Sabra19G0133700 Salix brachista HOM05D002278 ORTHO05D007219 9.9e-10 67.8 128 36.7
Lj3g0009272 Lotus japonicus HOM05D002278 ORTHO05D007219 1.3e-09 67.4 104 41.3
Hma1.2p1_3430F.1_g336000 Hydrangea macrophylla HOM05D002278 ORTHO05D007219 2.2e-09 66.6 87 51.7
Duzib248G0068 Durio zibethinus HOM05D002278 ORTHO05D007219 3.8e-09 65.9 107 39.3
DCAR_021206 Daucus carota HOM05D002278 ORTHO05D007219 8.4e-09 64.7 104 39.4
TPR.G30071 Trifolium pratense HOM05D002278 ORTHO05D007219 8.4e-09 64.7 104 35.6
Medtr0148s0050 Medicago truncatula HOM05D002278 ORTHO05D007219 1.4e-08 63.9 104 38.5
Psat0s3883g0040 Pisum sativum HOM05D002278 ORTHO05D007219 1.4e-08 63.9 104 35.6
FvH4_6g44290 Fragaria vesca HOM05D002278 ORTHO05D007219 2.4e-08 63.2 103 43.7
FAN09G0224 Fragaria x ananassa HOM05D002278 ORTHO05D007219 2.4e-08 63.2 103 43.7
Lalb_Chr19g0135581 Lupinus albus HOM05D002278 ORTHO05D007219 2.4e-08 63.2 102 41.2
Thecc.02G167100 Theobroma cacao HOM05D002278 ORTHO05D007219 3.2e-08 62.8 98 41.8
Potri.019G119500 Populus trichocarpa HOM05D002278 ORTHO05D007219 5.4e-08 62.0 105 39.0
FAN14G0729 Fragaria x ananassa HOM05D002278 ORTHO05D007219 9.3e-08 61.2 103 42.7
ClCG02G001480 Citrullus lanatus HOM05D002278 ORTHO05D007219 1.2e-07 60.8 66 53.0
FAN05G3709 Fragaria x ananassa HOM05D002278 ORTHO05D007219 1.2e-07 60.8 103 41.7
Lalb_Chr03g0029011 Lupinus albus HOM05D002278 ORTHO05D007219 2.1e-07 60.1 105 35.2
FAN02G4012 Fragaria x ananassa HOM05D002278 ORTHO05D007219 3.5e-07 59.3 103 41.7
Duzib132G0377 Durio zibethinus HOM05D002278 ORTHO05D007219 6.0e-07 58.5 107 37.4
EL10Ac9g20705 Beta vulgaris HOM05D002278 ORTHO05D007219 2.3e-06 56.6 90 37.8
Sc12g0002600 Simmondsia chinensis HOM05D002278 ORTHO05D007219 3.0e-06 56.2 101 31.7
Migut.H01194 Erythranthe guttata HOM05D002278 ORTHO05D007219 3.9e-06 55.8 105 37.1
Lsat_1_v5_gn_3_41820 Lactuca sativa HOM05D002278 ORTHO05D007219 8.7e-06 54.7 83 42.2


User provided reference genes

Program Settings