Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13826 Davidia involucrata HOM05D004838 ORTHO05D005373 3.6e-52 208.0 106 100.0
CSS0009105 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 7.8e-31 137.1 91 75.8
Nitab4.5_0002791g0020 Nicotiana tabacum HOM05D004838 ORTHO05D005373 3.9e-30 134.8 89 76.4
Nitab4.5_0010094g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 1.5e-29 132.9 89 75.3
PGSC0003DMG400018373 Solanum tuberosum HOM05D004838 ORTHO05D005373 1.8e-27 125.9 89 71.9
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 5.2e-27 124.4 89 73.0
Solyc07g054730.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 5.2e-27 124.4 89 70.8
Sopen07g028660 Solanum pennellii HOM05D004838 ORTHO05D005373 5.2e-27 124.4 89 70.8
Hma1.2p1_0565F.1_g179630 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 6.8e-27 124.0 95 66.3
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 1.5e-26 122.9 89 71.9
Actinidia09904 Actinidia chinensis HOM05D004838 ORTHO05D005373 4.4e-26 121.3 84 75.0
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 8.3e-25 117.1 90 67.8
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 1.4e-24 116.3 89 70.8
CSS0036889 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 1.9e-24 115.9 91 68.1
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 1.6e-23 112.8 89 64.0
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 2.0e-23 112.5 89 62.9
CSS0025457 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 8.6e-22 107.1 92 66.3
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 8.6e-22 107.1 89 59.6
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.9e-21 105.9 89 60.7
CSS0031952 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 2.5e-21 105.5 92 66.3
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 2.5e-21 105.5 89 68.5
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 4.3e-21 104.8 89 60.7
CSS0009600 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 7.3e-21 104.0 94 62.8
Cc05_g06190 Coffea canephora HOM05D004838 ORTHO05D005373 9.5e-21 103.6 89 60.7
TAR629G1266 Trochodendron aralioides HOM05D004838 ORTHO05D005373 1.2e-20 103.2 89 66.3
DCAR_012975 Daucus carota HOM05D004838 ORTHO05D005373 1.6e-20 102.8 90 61.1
Rhsim06G0152400 Rhododendron simsii HOM05D004838 ORTHO05D005373 3.6e-20 101.7 89 62.9
Migut.M00337 Erythranthe guttata HOM05D004838 ORTHO05D005373 6.2e-20 100.9 92 59.8
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 6.2e-20 100.9 89 61.8
CSS0040113 Camellia sinensis var. sinensis HOM05D004838 ORTHO05D005373 3.1e-19 98.6 95 60.0
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 5.2e-19 97.8 84 64.3
SGA_v2.0_scaffold70G23461 Striga asiatica HOM05D004838 ORTHO05D005373 5.2e-19 97.8 92 62.0
Migut.H01017 Erythranthe guttata HOM05D004838 ORTHO05D005373 8.9e-19 97.1 89 59.6
Atru.chr6.3079 Acer truncatum HOM05D004838 ORTHO05D005373 2.0e-18 95.9 89 58.4
Glyma.12G201000 Glycine max HOM05D004838 ORTHO05D005373 2.9e-17 92.0 90 55.6
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 3.7e-17 91.7 91 52.7
Phvul.005G107800 Phaseolus vulgaris HOM05D004838 ORTHO05D005373 8.3e-17 90.5 90 56.7
Glyma.13G301200 Glycine max HOM05D004838 ORTHO05D005373 3.2e-16 88.6 90 53.3
ECA246G0551 Erigeron canadensis HOM05D004838 ORTHO05D005373 4.1e-16 88.2 81 64.2
QL08p037147 Quercus lobata HOM05D004838 ORTHO05D005373 4.1e-16 88.2 81 59.3
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 5.4e-16 87.8 90 57.8
Lsat_1_v5_gn_3_40141 Lactuca sativa HOM05D004838 ORTHO05D005373 7.1e-16 87.4 89 57.3
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 9.2e-16 87.0 81 55.6
Nn1g03874 Nelumbo nucifera HOM05D004838 ORTHO05D005373 9.2e-16 87.0 90 56.7
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 1.6e-15 86.3 90 56.7
TAR627G0102 Trochodendron aralioides HOM05D004838 ORTHO05D005373 1.6e-15 86.3 80 58.8
Actinidia08019 Actinidia chinensis HOM05D004838 ORTHO05D005373 3.5e-15 85.1 90 56.7
Lalb_Chr14g0366611 Lupinus albus HOM05D004838 ORTHO05D005373 3.5e-15 85.1 89 48.3
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 3.5e-15 85.1 90 56.7
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 6.0e-15 84.3 90 57.8
Manes.13G151900 Manihot esculenta HOM05D004838 ORTHO05D005373 7.8e-15 84.0 89 53.9
Nn1g06781 Nelumbo nucifera HOM05D004838 ORTHO05D005373 2.3e-14 82.4 89 56.2
Sed0001014 Sechium edule HOM05D004838 ORTHO05D005373 2.3e-14 82.4 89 52.8
Ciclev10017352m.g Citrus clementina HOM05D004838 ORTHO05D005373 3.9e-14 81.6 89 51.7
MELO3C018765.2 Cucumis melo HOM05D004838 ORTHO05D005373 3.9e-14 81.6 89 51.7
CsaV3_7G004130 Cucumis sativus L. HOM05D004838 ORTHO05D005373 3.9e-14 81.6 89 51.7
ClCG02G001310 Citrullus lanatus HOM05D004838 ORTHO05D005373 6.6e-14 80.9 89 51.7
Thecc.02G171400 Theobroma cacao HOM05D004838 ORTHO05D005373 8.6e-14 80.5 90 51.1
Ca_01537_v3 Cicer arietinum L. HOM05D004838 ORTHO05D005373 1.5e-13 79.7 89 50.6
TWI36G0547 Tripterygium wilfordii HOM05D004838 ORTHO05D005373 2.5e-13 79.0 89 49.4
Migut.H01015 Erythranthe guttata HOM05D004838 ORTHO05D005373 4.3e-13 78.2 90 53.3
Medtr2g090020 Medicago truncatula HOM05D004838 ORTHO05D005373 4.3e-13 78.2 89 48.3
COL.COLO4_13681 Corchorus olitorius HOM05D004838 ORTHO05D005373 9.5e-13 77.0 90 48.9
Sed0027638 Sechium edule HOM05D004838 ORTHO05D005373 9.5e-13 77.0 89 51.7
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 2.1e-12 75.9 89 52.8
Manes.12G082700 Manihot esculenta HOM05D004838 ORTHO05D005373 2.3e-11 72.4 89 47.2
Psat5g269720 Pisum sativum HOM05D004838 ORTHO05D005373 2.3e-11 72.4 89 46.1
Potri.013G147700 Populus trichocarpa HOM05D004838 ORTHO05D005373 2.3e-11 72.4 90 55.6
Psat5g269560 Pisum sativum HOM05D004838 ORTHO05D005373 5.2e-11 71.2 89 47.2
ECA246G0483 Erigeron canadensis HOM05D004838 ORTHO05D005373 6.8e-11 70.9 81 55.6
Migut.H01016 Erythranthe guttata HOM05D004838 ORTHO05D005373 8.9e-11 70.5 90 53.3
Sabra19G0117300 Salix brachista HOM05D004838 ORTHO05D005373 8.9e-11 70.5 89 50.6
Sabra19G0136400 Salix brachista HOM05D004838 ORTHO05D005373 8.9e-11 70.5 89 50.6
Potri.019G116300 Populus trichocarpa HOM05D004838 ORTHO05D005373 1.2e-10 70.1 89 51.7
Psat5g269520 Pisum sativum HOM05D004838 ORTHO05D005373 2.0e-10 69.3 89 43.8
Gorai.002G017000 Gossypium raimondii HOM05D004838 ORTHO05D005373 2.6e-10 68.9 90 47.8
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 2.6e-10 68.9 82 54.9
ECA246G2857 Erigeron canadensis HOM05D004838 ORTHO05D005373 5.8e-10 67.8 90 51.1
Gohir.A01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 5.8e-10 67.8 90 47.8
Gohir.D01G015300 Gossypium hirsutum HOM05D004838 ORTHO05D005373 5.8e-10 67.8 90 46.7
TPR.G27093 Trifolium pratense HOM05D004838 ORTHO05D005373 5.8e-10 67.8 89 44.9
Nitab4.5_0011184g0010 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.9e-10 67.0 90 48.9
Sabra13G0119300 Salix brachista HOM05D004838 ORTHO05D005373 1.7e-09 66.2 89 52.8
ECA246G1879 Erigeron canadensis HOM05D000214 ORTHO05D000131 3.8e-09 65.1 80 53.8
Lj3g0009480 Lotus japonicus HOM05D004838 ORTHO05D005373 3.8e-09 65.1 90 42.2
Psat5g269640 Pisum sativum HOM05D004838 ORTHO05D005373 3.8e-09 65.1 89 41.6
Cpa.g.sc34.87 Carica papaya HOM05D004838 ORTHO05D005373 4.9e-09 64.7 92 48.9
Medtr2g090010 Medicago truncatula HOM05D004838 ORTHO05D005373 4.9e-09 64.7 89 46.1
Lsat_1_v5_gn_3_40361 Lactuca sativa HOM05D004838 ORTHO05D005373 2.4e-08 62.4 89 44.9
ATR0852G001 Amborella trichopoda HOM05D004838 ORTHO05D005373 5.4e-08 61.2 90 48.9
QL02p042335 Quercus lobata HOM05D004838 ORTHO05D005373 9.2e-08 60.5 36 75.0
ATR0693G174 Amborella trichopoda HOM05D004838 ORTHO05D005373 1.2e-07 60.1 88 48.9
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 2.7e-07 58.9 89 41.6
Lsat_1_v5_gn_3_40020 Lactuca sativa HOM05D004838 ORTHO05D005373 3.5e-07 58.5 71 52.1
Medtr2g090015 Medicago truncatula HOM05D004838 ORTHO05D005373 3.5e-07 58.5 89 40.4
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 3.5e-07 58.5 84 47.6
CDE02G2086 Ceratophyllum demersum HOM05D001554 ORTHO05D001481 4.6e-07 58.2 89 44.9
Solyc12g005600.1 Solanum lycopersicum HOM05D004838 ORTHO05D005373 1.3e-06 56.6 89 46.1
ECA246G1803 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.7e-06 56.2 87 41.4
CDE10G0022 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 2.3e-06 55.8 103 40.8
AL7G24360 Arabidopsis lyrata HOM05D004838 ORTHO05D005373 3.9e-06 55.1 93 44.1
AT4G28240 Arabidopsis thaliana HOM05D004838 ORTHO05D005373 3.9e-06 55.1 93 44.1
Sc21g0002530 Simmondsia chinensis HOM05D004838 ORTHO05D005373 3.9e-06 55.1 88 48.9
Carub.0007s1252 Capsella rubella HOM05D004838 ORTHO05D005373 6.6e-06 54.3 95 42.1
CDE05G2085 Ceratophyllum demersum HOM05D004838 ORTHO05D005373 6.6e-06 54.3 94 41.5
Sp7g26200 Schrenkiella parvula HOM05D004838 ORTHO05D005373 6.6e-06 54.3 89 40.4


User provided reference genes

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