Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 2.3e-192 675.6 397 100.0
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.3e-160 570.1 379 83.6
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 2.5e-159 565.8 397 79.1
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 6.2e-158 561.2 379 76.8
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.4e-157 560.1 379 76.5
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 3.1e-157 558.9 380 76.1
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.5e-156 556.6 398 77.1
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 5.8e-156 554.7 383 85.9
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 7.6e-156 554.3 382 75.1
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 7.6e-156 554.3 397 80.6
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.9e-154 549.7 388 77.6
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 2.5e-154 549.3 387 75.7
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 5.5e-154 548.1 400 82.5
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 1.0e-152 543.9 380 85.0
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 1.3e-152 543.5 395 84.8
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 6.7e-152 541.2 376 87.0
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.9e-151 539.7 386 84.7
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.5e-151 539.3 382 84.6
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 9.7e-151 537.3 379 86.3
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.2e-150 536.2 385 83.9
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 2.8e-150 535.8 426 77.0
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 4.8e-150 535.0 376 85.1
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.4e-149 533.5 380 82.1
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.2e-148 530.4 409 80.2
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.2e-148 530.4 374 84.8
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.5e-148 530.0 416 78.1
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.6e-148 529.3 409 80.0
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 2.6e-148 529.3 384 82.3
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 2.6e-148 529.3 385 83.4
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 2.6e-148 529.3 385 83.6
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 7.7e-148 527.7 396 81.6
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 2.9e-147 525.8 386 76.4
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.9e-147 525.8 386 78.2
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 5.0e-147 525.0 417 69.3
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 6.5e-147 524.6 376 80.3
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 8.5e-147 524.2 417 71.7
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 1.9e-146 523.1 388 83.0
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 3.2e-146 522.3 390 82.6
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 4.2e-146 521.9 403 74.2
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 9.4e-146 520.8 394 76.6
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 7.9e-145 517.7 424 72.6
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 4.3e-143 511.9 417 74.1
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 5.7e-143 511.5 429 69.7
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 9.7e-143 510.8 408 72.3
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.1e-141 507.3 379 81.3
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 5.3e-141 505.0 431 63.6
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 4.5e-140 501.9 423 62.9
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 7.7e-140 501.1 397 71.5
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.7e-139 500.0 392 79.3
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.5e-138 496.1 409 75.1
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 1.6e-137 493.4 409 77.5
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 4.7e-137 491.9 380 71.1
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 2.0e-135 486.5 384 70.8
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 7.4e-135 484.6 384 75.5
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 4.8e-134 481.9 384 75.5
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.4e-133 479.6 381 64.3
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.4e-133 479.6 381 64.0
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.0e-133 478.0 391 71.1
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.6e-132 476.1 428 65.9
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 2.6e-132 476.1 400 71.5
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 3.5e-132 475.7 362 70.2
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 4.5e-132 475.3 401 70.1
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.9e-132 474.9 396 71.0
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.5e-131 471.5 401 69.8
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 1.4e-130 470.3 366 80.3
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.1e-129 466.5 404 69.3
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 2.7e-129 466.1 386 64.2
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 4.7e-129 465.3 357 78.2
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.0e-128 464.2 379 73.1
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 3.0e-128 462.6 386 69.4
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 3.9e-128 462.2 402 64.7
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.1e-127 460.7 384 68.8
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 3.3e-127 459.1 404 67.8
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 5.7e-127 458.4 400 70.0
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.7e-126 456.8 427 63.9
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 2.0e-124 449.9 398 66.8
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 7.7e-124 448.0 392 67.6
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 1.3e-123 447.2 395 71.9
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 2.2e-123 446.4 403 65.0
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 2.2e-123 446.4 403 65.0
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 2.9e-123 446.0 399 68.2
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 5.0e-123 445.3 393 71.5
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 6.5e-123 444.9 394 67.8
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.1e-122 444.1 395 70.9
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.1e-122 444.1 395 70.9
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.1e-122 444.1 402 66.2
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.1e-122 444.1 402 66.2
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.1e-122 444.1 401 68.8
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.1e-122 444.1 353 77.3
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 7.2e-122 441.4 405 65.4
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 7.2e-122 441.4 399 71.2
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 4.7e-121 438.7 334 72.8
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 6.1e-121 438.3 399 70.2
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 5.2e-120 435.3 401 69.1
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 3.4e-119 432.6 357 64.7
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 5.7e-119 431.8 332 77.4
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.2e-118 429.9 523 56.0
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.8e-117 426.8 421 64.8
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 3.1e-117 426.0 332 69.0
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 2.0e-116 423.3 379 64.1
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 5.9e-116 421.8 475 57.3
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 7.7e-116 421.4 297 77.8
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 5.0e-115 418.7 293 85.7
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 8.5e-115 417.9 377 62.6
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 4.7e-113 412.1 376 66.2
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 4.7e-113 412.1 391 66.2
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 4.8e-110 402.1 395 60.5
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-109 400.2 391 66.8
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 5.4e-109 398.7 391 67.0
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 7.0e-109 398.3 395 67.1
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.2e-108 397.5 395 66.8
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 1.6e-108 397.1 344 61.0
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.7e-108 394.8 391 61.9
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-105 387.1 410 61.5
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 4.3e-98 362.5 402 54.5
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.3e-96 356.7 420 51.4
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 9.8e-95 351.3 393 62.1
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.1e-93 345.9 358 55.3
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 9.2e-93 344.7 382 53.1
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 2.8e-89 333.2 376 56.9
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 3.4e-87 326.2 343 49.3
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.9e-85 320.5 329 52.0
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 1.0e-83 314.7 163 87.7
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 3.3e-82 309.7 366 54.6
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 9.5e-82 308.1 181 82.9
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.6e-81 306.2 346 47.4
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 5.2e-80 302.4 285 75.1
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 9.9e-79 298.1 283 76.3
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 5.4e-77 292.4 326 48.5
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.2e-71 274.6 291 65.6
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.7e-68 263.5 272 59.6
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 2.0e-63 247.3 125 89.6
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 4.0e-56 223.0 158 77.8
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 6.9e-56 222.2 109 92.7
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.8e-51 207.6 104 89.4
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 8.4e-46 188.7 113 72.6
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 1.6e-44 184.5 328 36.3
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.9e-44 182.2 163 55.2
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 2.0e-39 167.5 150 62.7
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 2.6e-39 167.2 82 89.0
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 6.5e-30 136.0 100 71.0
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 2.5e-29 134.0 259 34.7
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 7.0e-16 89.4 83 49.4
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 1.7e-14 84.7 114 43.9
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 2.6e-10 70.9 59 59.3
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 8.2e-09 65.9 72 47.2


User provided reference genes

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