Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13661 Davidia involucrata HOM05D008906 ORTHO05D010752 5.9e-133 477.6 256 100.0
Dinv01857 Davidia involucrata HOM05D000455 ORTHO05D010375 3.2e-30 136.3 172 51.2
Dinv13668 Davidia involucrata HOM05D008906 ORTHO05D010752 2.1e-29 133.7 90 86.7
Dinv38771 Davidia involucrata HOM05D000455 ORTHO05D000434 1.9e-27 127.1 226 41.2
Dinv38769 Davidia involucrata HOM05D000455 ORTHO05D000434 5.3e-25 119.0 222 39.6
Dinv01855 Davidia involucrata HOM05D000455 ORTHO05D000434 1.0e-23 114.8 196 41.8
Dinv24846 Davidia involucrata HOM05D000455 ORTHO05D000434 1.6e-21 107.5 235 36.2
Dinv24849 Davidia involucrata HOM05D000455 ORTHO05D000434 2.3e-20 103.6 233 38.2
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 7.4e-19 98.6 116 54.3
Dinv11542 Davidia involucrata HOM05D000455 ORTHO05D000434 7.4e-19 98.6 210 40.5
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 9.7e-19 98.2 105 56.2
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 6.3e-18 95.5 88 63.6
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 5.3e-17 92.4 97 55.7
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 5.3e-17 92.4 97 56.7
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 1.5e-16 90.9 97 53.6
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 2.0e-16 90.5 95 52.6
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 2.6e-16 90.1 97 55.7
Dinv24844 Davidia involucrata HOM05D000455 ORTHO05D000434 3.4e-16 89.7 237 35.0
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 4.5e-16 89.4 97 51.5
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.7e-15 87.4 71 62.0
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 2.9e-15 86.7 89 53.9
Dinv11551 Davidia involucrata HOM05D000455 ORTHO05D000434 4.2e-14 82.8 209 37.8
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 1.6e-13 80.9 81 54.3
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 2.7e-13 80.1 104 48.1
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 1.8e-12 77.4 84 48.8
FAN04G0646 Fragaria x ananassa HOM05D000455 ORTHO05D000434 9.7e-11 71.6 68 50.0
Potri.003G143000 Populus trichocarpa HOM05D000455 ORTHO05D000434 9.7e-11 71.6 68 47.1
RcHm_v2.0_Chr7g0186181 Rosa chinensis HOM05D000455 ORTHO05D000434 9.7e-11 71.6 68 51.5
Cfa011968 Carpinus fangiana HOM05D000455 ORTHO05D000434 1.3e-10 71.2 68 47.1
Sabra03G0103600 Salix brachista HOM05D000455 ORTHO05D000434 1.3e-10 71.2 68 47.1
Dinv24847 Davidia involucrata HOM05D000455 ORTHO05D000434 3.7e-10 69.7 260 30.0
QL02p029599 Quercus lobata HOM05D000455 ORTHO05D000434 3.7e-10 69.7 68 47.1
Dinv13089 Davidia involucrata HOM05D000455 ORTHO05D000434 4.8e-10 69.3 226 32.7
FvH4_5g11570 Fragaria vesca HOM05D000455 ORTHO05D000434 4.8e-10 69.3 68 50.0
FAN13G2452 Fragaria x ananassa HOM05D000455 ORTHO05D000434 4.8e-10 69.3 68 50.0
FAN18G2525 Fragaria x ananassa HOM05D000455 ORTHO05D000434 4.8e-10 69.3 68 50.0
FAN18G2932 Fragaria x ananassa HOM05D000455 ORTHO05D000434 4.8e-10 69.3 68 50.0
CSS0026143 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 8.2e-10 68.6 240 29.2
CiPaw.12G080700 Carya illinoinensis HOM05D000455 ORTHO05D000434 1.4e-09 67.8 68 45.6
Thecc.03G302500 Theobroma cacao HOM05D000455 ORTHO05D000434 1.4e-09 67.8 67 49.3
TAR375G0327 Trochodendron aralioides HOM05D000455 ORTHO05D000434 1.4e-09 67.8 71 49.3
CSS0048530 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.4e-09 67.0 216 30.6
CSS0025475 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 6.9e-09 65.5 240 28.8
TAR629G0003 Trochodendron aralioides HOM05D000455 ORTHO05D000434 6.9e-09 65.5 112 35.7
CSS0029762 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 9.1e-09 65.1 240 28.8
PSO170G2314 Papaver somniferum HOM05D000455 ORTHO05D000434 9.1e-09 65.1 84 44.0
Dinv11552 Davidia involucrata HOM05D000455 ORTHO05D000434 1.2e-08 64.7 58 60.3
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 1.2e-08 64.7 83 42.2
PSO063G2561 Papaver somniferum HOM05D000455 ORTHO05D000434 1.2e-08 64.7 84 45.2
Hma1.2p1_0359F.1_g135010 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.5e-08 64.3 68 45.6
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 2.0e-08 63.9 225 28.9
CSS0044995 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.0e-08 63.9 240 28.3
Gohir.A02G095700 Gossypium hirsutum HOM05D000455 ORTHO05D000434 2.0e-08 63.9 67 47.8
Dinv38774 Davidia involucrata HOM05D000455 ORTHO05D000434 2.6e-08 63.5 70 52.9
Eucgr.E01022 Eucalyptus grandis HOM05D000455 ORTHO05D000434 3.4e-08 63.2 71 46.5
Gohir.D03G087700 Gossypium hirsutum HOM05D000455 ORTHO05D000434 3.4e-08 63.2 76 42.1
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 3.4e-08 63.2 91 40.7
Haze_09110 Corylus avellana HOM05D000455 ORTHO05D000434 4.5e-08 62.8 69 43.5
Gohir.D08G124900 Gossypium hirsutum HOM05D000455 ORTHO05D000434 4.5e-08 62.8 67 44.8
Gorai.004G131700 Gossypium raimondii HOM05D000455 ORTHO05D000434 4.5e-08 62.8 67 44.8
CSS0025654 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.9e-08 62.4 209 29.2
CiPaw.11G116600 Carya illinoinensis HOM05D000455 ORTHO05D000434 5.9e-08 62.4 68 41.2
Gorai.003G074300 Gossypium raimondii HOM05D000455 ORTHO05D000434 5.9e-08 62.4 67 46.3
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 5.9e-08 62.4 94 39.4
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 5.9e-08 62.4 94 39.4
Potri.001G087900 Populus trichocarpa HOM05D000455 ORTHO05D000434 7.7e-08 62.0 68 44.1
Sabra01G0064300 Salix brachista HOM05D000455 ORTHO05D000434 1.0e-07 61.6 68 42.6
CSS0009880 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.3e-07 61.2 217 30.0
FAN08G0575 Fragaria x ananassa HOM05D000455 ORTHO05D000434 1.3e-07 61.2 89 39.3
Gohir.A08G111800 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.3e-07 61.2 67 43.3
Hma1.2p1_0440F.1_g153600 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.7e-07 60.8 72 44.4
Nn1g00300 Nelumbo nucifera HOM05D000455 ORTHO05D000434 1.7e-07 60.8 68 47.1
Ciclev10018744m.g Citrus clementina HOM05D000455 ORTHO05D000434 2.9e-07 60.1 66 43.9
Hma1.2p1_0049F.1_g028210 Hydrangea macrophylla HOM05D000455 ORTHO05D010375 2.9e-07 60.1 95 42.1
Dinv10484 Davidia involucrata HOM05D000455 ORTHO05D000434 6.5e-07 58.9 62 50.0
Duzib205G1505 Durio zibethinus HOM05D000455 ORTHO05D000434 6.5e-07 58.9 66 43.9
Dinv37381 Davidia involucrata HOM05D000455 ORTHO05D010375 8.5e-07 58.5 159 36.5
Hma1.2p1_0543F.1_g175190 Hydrangea macrophylla HOM05D008906 ORTHO05D010752 8.5e-07 58.5 82 42.7
Oeu041395.2 Olea europaea HOM05D000455 ORTHO05D000434 1.1e-06 58.2 71 42.3
Sed0008415 Sechium edule HOM05D000455 ORTHO05D000434 1.1e-06 58.2 128 30.5
Dinv38202 Davidia involucrata HOM05D000455 ORTHO05D000434 1.4e-06 57.8 102 48.0
CSS0015680 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.9e-06 57.4 250 26.0
Haze_09108 Corylus avellana HOM05D000455 ORTHO05D000434 1.9e-06 57.4 64 43.8
CSS0018542 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 2.5e-06 57.0 207 30.9
Sed0024207 Sechium edule HOM05D000455 ORTHO05D000434 2.5e-06 57.0 68 44.1
COL.COLO4_10746 Corchorus olitorius HOM05D000455 ORTHO05D000434 3.2e-06 56.6 71 43.7
Gohir.A09G189300 Gossypium hirsutum HOM05D000455 ORTHO05D000434 3.2e-06 56.6 74 39.2
CSS0024415 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 4.2e-06 56.2 182 30.2
ClCG07G011370 Citrullus lanatus HOM05D000455 ORTHO05D000434 4.2e-06 56.2 124 29.0
Dinv10489 Davidia involucrata HOM05D000455 ORTHO05D000434 4.2e-06 56.2 67 44.8
Nitab4.5_0002793g0050 Nicotiana tabacum HOM05D000455 ORTHO05D000434 4.2e-06 56.2 182 28.6
MBI06_g33741_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 5.5e-06 55.8 68 39.7
MBI06_g44138_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 5.5e-06 55.8 68 39.7
Phvul.007G071900 Phaseolus vulgaris HOM05D000455 ORTHO05D000434 5.5e-06 55.8 68 42.6
CsaV3_4G006840 Cucumis sativus L. HOM05D000455 ORTHO05D000434 7.2e-06 55.5 93 34.4
Gohir.D09G184100 Gossypium hirsutum HOM05D000455 ORTHO05D000434 7.2e-06 55.5 74 39.2
CSS0013811 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 9.4e-06 55.1 182 29.1
Lj5g0025579 Lotus japonicus HOM05D000455 ORTHO05D000434 9.4e-06 55.1 71 40.8


User provided reference genes

Program Settings