Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13657 Davidia involucrata HOM05D020998 ORTHO05D178683 5.0e-79 297.7 154 100.0
Dinv32746 Davidia involucrata HOM05D000847 ORTHO05D003278 2.3e-15 86.3 75 65.3
Dinv13900 Davidia involucrata HOM05D000911 ORTHO05D000890 2.8e-13 79.3 44 93.2
Dinv31149 Davidia involucrata HOM05D020998 ORTHO05D000006 2.8e-13 79.3 51 78.4
DCAR_008159 Daucus carota HOM05D000911 ORTHO05D025227 8.1e-13 77.8 79 55.7
Rhsim02G0106500 Rhododendron simsii HOM05D000911 ORTHO05D000890 1.5e-11 73.6 44 84.1
Dinv30182 Davidia involucrata HOM05D020998 ORTHO05D183480 3.4e-11 72.4 63 65.1
Actinidia26906 Actinidia chinensis HOM05D000911 ORTHO05D000890 5.8e-11 71.6 44 79.5
DCAR_004224 Daucus carota HOM05D000911 ORTHO05D025227 7.6e-11 71.2 79 51.9
CSS0048392 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D000890 1.7e-10 70.1 44 77.3
Sc05g0009240 Simmondsia chinensis HOM05D000911 ORTHO05D000890 1.7e-10 70.1 44 81.8
MSTRG.14638 Avicennia marina HOM05D000911 ORTHO05D000890 3.8e-10 68.9 44 77.3
Oeu014928.1 Olea europaea HOM05D000911 ORTHO05D000890 4.9e-10 68.6 44 77.3
PGR042G1139 Punica granatum HOM05D000911 ORTHO05D000890 4.9e-10 68.6 44 79.5
vmacro22907 Vaccinium macrocarpon HOM05D000911 ORTHO05D000890 4.9e-10 68.6 45 75.6
COL.COLO4_31788 Corchorus olitorius HOM05D000911 ORTHO05D000890 6.4e-10 68.2 44 72.7
Hma1.2p1_0749F.1_g212650 Hydrangea macrophylla HOM05D000911 ORTHO05D000890 1.1e-09 67.4 44 77.3
Lj1A1231T40 Lonicera japonica HOM05D000911 ORTHO05D000890 1.1e-09 67.4 45 75.6
Oeu025271.1 Olea europaea HOM05D000911 ORTHO05D000890 1.1e-09 67.4 44 77.3
vmacro15790 Vaccinium macrocarpon HOM05D000911 ORTHO05D025227 1.1e-09 67.4 63 60.3
vmacro15806 Vaccinium macrocarpon HOM05D000911 ORTHO05D025227 1.1e-09 67.4 63 60.3
Actinidia05509 Actinidia chinensis HOM05D000911 ORTHO05D000890 1.4e-09 67.0 44 77.3
CSS0002511 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D000890 1.4e-09 67.0 44 75.0
CSS0009709 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D000890 1.4e-09 67.0 44 75.0
Potri.011G004700 Populus trichocarpa HOM05D000911 ORTHO05D000890 1.9e-09 66.6 44 72.7
Ciclev10015131m.g Citrus clementina HOM05D000911 ORTHO05D000890 3.2e-09 65.9 44 79.5
Lsat_1_v5_gn_1_129680 Lactuca sativa HOM05D000911 ORTHO05D000890 3.2e-09 65.9 44 75.0
ECA248G1242 Erigeron canadensis HOM05D000911 ORTHO05D000890 4.2e-09 65.5 44 75.0
Sabra11G0003600 Salix brachista HOM05D001191 ORTHO05D000979 4.2e-09 65.5 44 72.7
TAR626G1937 Trochodendron aralioides HOM05D000911 ORTHO05D000890 5.5e-09 65.1 44 77.3
vmacro22908 Vaccinium macrocarpon HOM05D000911 ORTHO05D000890 5.5e-09 65.1 44 75.0
Actinidia04187 Actinidia chinensis HOM05D000911 ORTHO05D000890 9.3e-09 64.3 44 75.0
HanXRQChr01g0004201 Helianthus annuus HOM05D000911 ORTHO05D000890 1.2e-08 63.9 44 70.5
QL08p005768 Quercus lobata HOM05D000911 ORTHO05D000890 1.2e-08 63.9 44 75.0
Hund21413 Selenicereus undatus HOM05D000911 ORTHO05D000890 1.2e-08 63.9 44 75.0
CAN.G1014.1 Capsicum annuum HOM05D000911 ORTHO05D000890 1.6e-08 63.5 44 72.7
Nn1g07164 Nelumbo nucifera HOM05D000911 ORTHO05D000890 1.6e-08 63.5 44 77.3
Peaxi162Scf00147g00613 Petunia axillaris HOM05D000911 ORTHO05D000890 1.6e-08 63.5 44 72.7
MSTRG.7203 Avicennia marina HOM05D000911 ORTHO05D000890 2.7e-08 62.8 44 77.3
ClCG01G021920 Citrullus lanatus HOM05D000911 ORTHO05D000890 2.7e-08 62.8 43 74.4
Cc09_g01580 Coffea canephora HOM05D000911 ORTHO05D000890 2.7e-08 62.8 43 69.8
Migut.M01327 Erythranthe guttata HOM05D000911 ORTHO05D000890 2.7e-08 62.8 44 75.0
Gohir.A06G148600 Gossypium hirsutum HOM05D000911 ORTHO05D000890 2.7e-08 62.8 44 70.5
Gohir.D06G154600 Gossypium hirsutum HOM05D000911 ORTHO05D000890 2.7e-08 62.8 44 70.5
MD10G1322400 Malus domestica HOM05D000911 ORTHO05D000890 2.7e-08 62.8 44 75.0
Mapoly0024s0086 Marchantia polymorpha HOM05D000911 ORTHO05D000890 2.7e-08 62.8 44 70.5
Mapoly0024s0087 Marchantia polymorpha HOM05D000911 ORTHO05D000890 2.7e-08 62.8 44 72.7
Mapoly0204s0012 Marchantia polymorpha HOM05D000911 ORTHO05D000890 3.5e-08 62.4 44 70.5
Prupe.4G019500 Prunus persica HOM05D000911 ORTHO05D000890 3.5e-08 62.4 44 75.0
QL05p072984 Quercus lobata HOM05D000911 ORTHO05D000890 3.5e-08 62.4 44 72.7
GSVIVG01012716001 Vitis vinifera HOM05D000911 ORTHO05D000890 3.5e-08 62.4 44 68.2
Gorai.010G180700 Gossypium raimondii HOM05D000911 ORTHO05D000890 4.6e-08 62.0 44 70.5
Nitab4.5_0002827g0090 Nicotiana tabacum HOM05D000911 ORTHO05D000890 4.6e-08 62.0 44 70.5
PSO210G2249 Papaver somniferum HOM05D000911 ORTHO05D000890 4.6e-08 62.0 44 77.3
TAR627G0123 Trochodendron aralioides HOM05D000911 ORTHO05D000890 4.6e-08 62.0 44 75.0
CDE02G2024 Ceratophyllum demersum HOM05D000911 ORTHO05D000890 6.0e-08 61.6 74 50.0
Haze_06809 Corylus avellana HOM05D000911 ORTHO05D000890 7.9e-08 61.2 43 72.1
QL93p0073_0439 Quercus lobata HOM05D000911 ORTHO05D000890 7.9e-08 61.2 44 77.3
PSO832G0644 Papaver somniferum HOM05D000911 ORTHO05D000890 1.0e-07 60.8 44 75.0
TWI38G0912 Tripterygium wilfordii HOM05D000911 ORTHO05D000890 1.0e-07 60.8 44 65.9
Duzib235G1128 Durio zibethinus HOM05D000911 ORTHO05D000890 1.3e-07 60.5 44 65.9
FvH4_3g01940 Fragaria vesca HOM05D000911 ORTHO05D000890 1.3e-07 60.5 44 68.2
FAN21G3155 Fragaria x ananassa HOM05D000911 ORTHO05D000890 1.3e-07 60.5 44 68.2
FAN25G3392 Fragaria x ananassa HOM05D000911 ORTHO05D000890 1.3e-07 60.5 44 68.2
PGSC0003DMG400016478 Solanum tuberosum HOM05D000911 ORTHO05D000890 1.3e-07 60.5 44 68.2
MD05G1348000 Malus domestica HOM05D000911 ORTHO05D000890 1.8e-07 60.1 45 68.9
Nitab4.5_0007799g0040 Nicotiana tabacum HOM05D000911 ORTHO05D000890 1.8e-07 60.1 44 68.2
Solyc02g080620.3 Solanum lycopersicum HOM05D000911 ORTHO05D000890 1.8e-07 60.1 44 68.2
Sopen02g025330 Solanum pennellii HOM05D000911 ORTHO05D000890 1.8e-07 60.1 44 68.2
Dinv30234 Davidia involucrata HOM05D000690 ORTHO05D001022 2.3e-07 59.7 55 63.6
Migut.H01573 Erythranthe guttata HOM05D000911 ORTHO05D000890 2.3e-07 59.7 43 67.4
MELO3C007396.2 Cucumis melo HOM05D000911 ORTHO05D000890 3.0e-07 59.3 43 69.8
Eucgr.E04043 Eucalyptus grandis HOM05D000911 ORTHO05D000890 3.0e-07 59.3 44 70.5
Manes.16G006200 Manihot esculenta HOM05D000911 ORTHO05D000890 3.0e-07 59.3 44 63.6
RcHm_v2.0_Chr5g0002851 Rosa chinensis HOM05D000911 ORTHO05D000890 3.0e-07 59.3 44 65.9
SalBow8G2592 Salvia bowleyana HOM05D000911 ORTHO05D000890 3.0e-07 59.3 44 70.5
Hund23463 Selenicereus undatus HOM05D000911 ORTHO05D000890 3.0e-07 59.3 43 72.1
Pp3c18_4480 Physcomitrium patens HOM05D000911 ORTHO05D000890 3.9e-07 58.9 44 68.2
Pp3c19_13030 Physcomitrium patens HOM05D000911 ORTHO05D000890 3.9e-07 58.9 44 68.2
ATR0794G109 Amborella trichopoda HOM05D000911 ORTHO05D000890 5.1e-07 58.5 44 68.2
AagrBONN_evm.TU.Sc2ySwM_344.5459 Anthoceros agrestis HOM05D000911 ORTHO05D000890 5.1e-07 58.5 44 68.2
Aqoxy4G01870 Aquilegia oxysepala HOM05D000911 ORTHO05D000890 5.1e-07 58.5 44 70.5
CSS0022393 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 5.1e-07 58.5 31 87.1
CiPaw.09G092800 Carya illinoinensis HOM05D000911 ORTHO05D000890 5.1e-07 58.5 43 72.1
Potri.004G013400 Populus trichocarpa HOM05D000911 ORTHO05D000890 5.1e-07 58.5 43 65.1
Nn1g03493 Nelumbo nucifera HOM05D000911 ORTHO05D000890 6.7e-07 58.2 44 68.2
PSO541G3863 Papaver somniferum HOM05D000911 ORTHO05D000890 6.7e-07 58.2 44 68.2
SalBow1G3326 Salvia bowleyana HOM05D000911 ORTHO05D000890 6.7e-07 58.2 43 67.4
Sed0004114 Sechium edule HOM05D000911 ORTHO05D000890 6.7e-07 58.2 42 66.7
SEGI_07859 Sequoiadendron giganteum HOM05D000911 ORTHO05D000890 6.7e-07 58.2 44 65.9
CiPaw.10G071800 Carya illinoinensis HOM05D000911 ORTHO05D000890 8.7e-07 57.8 43 65.1
Dinv05418 Davidia involucrata HOM05D000911 ORTHO05D000890 1.9e-06 56.6 44 68.2
EL10Ac8g20071 Beta vulgaris HOM05D000911 ORTHO05D000890 2.5e-06 56.2 44 68.2
Lj4g0025071 Lotus japonicus HOM05D000911 ORTHO05D000890 2.5e-06 56.2 43 69.8
Pp3c17_22810 Physcomitrium patens HOM05D000911 ORTHO05D000890 2.5e-06 56.2 44 68.2
Ca_01607_v3 Cicer arietinum L. HOM05D000911 ORTHO05D000890 3.3e-06 55.8 43 69.8
CsaV3_6G048980 Cucumis sativus L. HOM05D000911 ORTHO05D000890 3.3e-06 55.8 43 65.1
DCAR_006465 Daucus carota HOM05D000911 ORTHO05D000890 3.3e-06 55.8 43 67.4
Dinv17125 Davidia involucrata HOM05D020998 ORTHO05D183195 3.3e-06 55.8 34 79.4
HanXRQChr17g0557501 Helianthus annuus HOM05D000911 ORTHO05D000890 3.3e-06 55.8 44 61.4
Hma1.2p1_0249F.1_g102260 Hydrangea macrophylla HOM05D000911 ORTHO05D000890 3.3e-06 55.8 44 68.2
PSO384G2940 Papaver somniferum HOM05D000911 ORTHO05D000890 3.3e-06 55.8 43 67.4
PSO675G0507 Papaver somniferum HOM05D000911 ORTHO05D000890 3.3e-06 55.8 44 65.9
Aqoxy1G02094 Aquilegia oxysepala HOM05D000911 ORTHO05D000890 4.3e-06 55.5 44 61.4
Lj1C924T12 Lonicera japonica HOM05D000911 ORTHO05D000890 4.3e-06 55.5 43 67.4
Nn2g10655 Nelumbo nucifera HOM05D000911 ORTHO05D000890 4.3e-06 55.5 44 68.2
Prupe.6G119200 Prunus persica HOM05D000911 ORTHO05D000890 4.3e-06 55.5 46 65.2
SGA_v2.0_scaffold7G03831 Striga asiatica HOM05D000911 ORTHO05D000890 4.3e-06 55.5 43 62.8
MBI05_g17779_MAGBIO Magnolia biondii HOM05D000911 ORTHO05D000890 5.6e-06 55.1 44 65.9
MD11G1123300 Malus domestica HOM05D000911 ORTHO05D000890 5.6e-06 55.1 44 65.9
PSO339G2854 Papaver somniferum HOM05D000911 ORTHO05D000890 5.6e-06 55.1 43 67.4
SHI02210 Sapria himalayana HOM05D000911 ORTHO05D000890 5.6e-06 55.1 43 62.8
CDE06G2003 Ceratophyllum demersum HOM05D000911 ORTHO05D000890 7.4e-06 54.7 46 65.2
CDE08G0576 Ceratophyllum demersum HOM05D000911 ORTHO05D000890 7.4e-06 54.7 46 65.2
MD11G1157600 Malus domestica HOM05D000911 ORTHO05D000890 7.4e-06 54.7 46 65.2
Manes.17G026400 Manihot esculenta HOM05D000911 ORTHO05D000890 7.4e-06 54.7 44 61.4
Nn2g14008 Nelumbo nucifera HOM05D000911 ORTHO05D000890 7.4e-06 54.7 46 63.0
PSO339G2457 Papaver somniferum HOM05D000911 ORTHO05D000890 7.4e-06 54.7 46 63.0
Rhsim06G0163400 Rhododendron simsii HOM05D000911 ORTHO05D000890 7.4e-06 54.7 43 67.4
vmacro15787 Vaccinium macrocarpon HOM05D000911 ORTHO05D025227 7.4e-06 54.7 59 54.2
VMungo1215G3013 Vigna mungo HOM05D000911 ORTHO05D000890 7.4e-06 54.7 44 65.9
Actinidia15716 Actinidia chinensis HOM05D000690 ORTHO05D001022 9.6e-06 54.3 29 82.8
Oeu019889.1 Olea europaea HOM05D000911 ORTHO05D000890 9.6e-06 54.3 44 61.4
Phvul.003G079600 Phaseolus vulgaris HOM05D000911 ORTHO05D000890 9.6e-06 54.3 44 65.9
Pp3c2_9380 Physcomitrium patens HOM05D000911 ORTHO05D000890 9.6e-06 54.3 44 63.6


User provided reference genes

Program Settings