Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 1.4e-125 453.0 233 100.0
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 2.3e-88 329.3 244 70.1
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 7.1e-85 317.8 253 66.8
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.5e-82 310.1 253 64.0
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 2.1e-81 306.2 238 65.1
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 8.1e-81 304.3 238 65.1
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 1.4e-80 303.5 271 62.4
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 2.3e-80 302.8 234 65.8
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 3.1e-80 302.4 240 64.6
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 8.9e-80 300.8 233 65.7
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 3.4e-79 298.9 194 73.7
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 5.8e-79 298.1 238 62.6
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 5.8e-79 298.1 237 64.6
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 9.9e-79 297.4 245 63.3
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 2.2e-78 296.2 240 62.5
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 2.9e-78 295.8 210 69.0
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 3.8e-78 295.4 236 64.4
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 4.9e-78 295.0 240 62.5
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 6.4e-78 294.7 240 66.7
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 1.9e-77 293.1 244 62.3
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 3.2e-77 292.4 236 62.3
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 4.1e-77 292.0 241 63.1
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 5.4e-77 291.6 236 63.6
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 5.4e-77 291.6 243 61.3
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 7.1e-77 291.2 242 63.2
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 2.1e-76 289.7 245 62.0
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 2.1e-76 289.7 244 63.5
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 2.7e-76 289.3 241 63.1
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.5e-76 288.9 234 63.2
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 6.0e-76 288.1 248 60.9
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 7.8e-76 287.7 236 63.6
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.3e-75 287.0 242 62.8
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 1.7e-75 286.6 245 60.8
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 1.7e-75 286.6 250 61.6
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 2.3e-75 286.2 216 66.2
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 6.6e-75 284.6 234 62.4
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 1.1e-74 283.9 234 59.8
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 3.3e-74 282.3 238 61.8
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 7.3e-74 281.2 244 59.0
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 4.7e-73 278.5 242 59.1
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 6.2e-73 278.1 234 61.1
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 1.8e-72 276.6 235 60.9
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 3.1e-72 275.8 244 58.2
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 3.1e-72 275.8 238 61.3
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 6.9e-72 274.6 239 58.6
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 8.9e-72 274.2 239 60.3
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 1.2e-71 273.9 242 59.5
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 2.0e-71 273.1 235 60.9
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 3.4e-71 272.3 235 59.6
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 4.4e-71 271.9 238 60.5
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 9.9e-71 270.8 237 58.6
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 2.2e-70 269.6 205 64.4
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 2.2e-70 269.6 242 59.5
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 6.4e-70 268.1 243 59.7
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 9.3e-69 264.2 243 57.6
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 3.5e-68 262.3 241 56.8
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 6.0e-68 261.5 215 60.9
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 1.3e-67 260.4 206 63.6
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.0e-67 259.2 202 66.3
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 8.7e-67 257.7 238 58.0
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 1.5e-66 256.9 211 61.1
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 1.5e-66 256.9 212 63.2
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 3.3e-66 255.8 242 57.9
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 7.3e-66 254.6 202 61.9
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 7.3e-66 254.6 241 56.8
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 1.3e-65 253.8 212 68.9
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 1.3e-65 253.8 243 57.6
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 2.1e-65 253.1 220 58.6
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 2.1e-65 253.1 220 58.6
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 2.1e-65 253.1 208 62.0
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 3.6e-65 252.3 205 62.4
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.4e-64 250.4 231 57.6
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 1.4e-64 250.4 205 62.0
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.8e-64 250.0 213 59.6
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 1.8e-64 250.0 210 61.0
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 3.1e-64 249.2 194 62.9
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 4.0e-64 248.8 213 59.6
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 4.0e-64 248.8 213 59.6
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 2.6e-63 246.1 244 56.1
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 1.7e-62 243.4 236 55.5
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 2.7e-60 236.1 195 60.5
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 1.0e-59 234.2 199 58.8
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 3.0e-59 232.6 234 51.7
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 6.7e-59 231.5 157 70.7
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 8.7e-59 231.1 210 55.7
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 4.3e-58 228.8 202 56.4
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 4.0e-56 222.2 195 57.9
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 3.2e-53 212.6 130 73.1
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 1.3e-51 207.2 140 70.0
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 5.6e-50 201.8 217 48.4
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 2.0e-47 193.4 310 41.3
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.2e-46 189.9 108 78.7
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 3.8e-46 189.1 110 76.4
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 6.5e-46 188.3 175 58.9
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 1.1e-45 187.6 113 75.2
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.2e-44 184.1 109 76.1
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 1.6e-44 183.7 137 58.4
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 7.4e-42 174.9 108 69.4
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 4.2e-37 159.1 180 48.3
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 5.5e-37 158.7 87 85.1
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 1.5e-34 150.6 96 74.0
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 2.5e-29 133.3 127 52.0
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 2.8e-25 119.8 139 50.4
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 6.9e-24 115.2 68 80.9
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 6.9e-24 115.2 68 80.9
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 3.4e-23 112.8 177 37.3
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 1.7e-22 110.5 78 62.8
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 6.5e-22 108.6 77 63.6
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 2.5e-21 106.7 118 43.2
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 3.0e-19 99.8 68 72.1
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 3.0e-19 99.8 134 49.3
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 4.8e-17 92.4 71 57.7
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 3.1e-16 89.7 125 38.4
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 5.0e-14 82.4 59 66.1
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 3.0e-11 73.2 65 61.5
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 5.2e-11 72.4 65 60.0
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 9.7e-10 68.2 44 65.9
Oeu013881.1 Olea europaea HOM05D006876 ORTHO05D008708 1.8e-08 63.9 99 42.4
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 2.4e-08 63.5 137 35.0


User provided reference genes

Program Settings