Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 1.5e-147 526.2 260 100.0
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 3.1e-105 385.6 255 76.9
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.2e-103 379.4 255 75.3
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 5.4e-102 374.8 259 74.5
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.7e-101 372.5 257 73.9
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 3.1e-97 359.0 260 69.6
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 6.9e-97 357.8 257 71.6
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 5.8e-96 354.8 251 72.9
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 2.2e-95 352.8 254 68.9
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.8e-92 343.2 204 81.4
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 2.3e-92 342.8 262 69.1
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 2.3e-92 342.8 261 70.9
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 3.9e-92 342.0 270 67.8
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 2.5e-91 339.3 253 68.8
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 7.4e-91 337.8 249 71.9
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 1.8e-89 333.2 252 71.0
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 2.4e-89 332.8 253 67.6
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 2.4e-89 332.8 265 68.3
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 3.1e-89 332.4 268 66.4
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 6.9e-89 331.3 254 67.7
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 7.6e-88 327.8 207 73.9
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 7.6e-88 327.8 264 64.8
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 2.2e-87 326.2 215 74.4
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 2.9e-87 325.9 250 69.2
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 3.8e-87 325.5 250 69.2
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 4.9e-87 325.1 247 68.4
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 6.4e-87 324.7 250 66.8
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 1.4e-86 323.6 245 66.1
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 1.9e-86 323.2 246 67.9
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.9e-86 323.2 246 68.3
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.9e-86 323.2 246 67.9
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 4.2e-86 322.0 210 74.3
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 7.1e-86 321.2 210 74.3
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 9.3e-86 320.9 250 66.0
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 3.5e-85 318.9 236 68.6
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 3.5e-85 318.9 246 66.3
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 4.6e-85 318.5 213 73.7
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 4.6e-85 318.5 246 66.3
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 6.0e-85 318.2 231 68.4
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 1.0e-84 317.4 205 73.7
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 1.8e-84 316.6 221 71.5
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 1.8e-84 316.6 258 65.1
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 2.3e-84 316.2 254 65.4
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 3.0e-84 315.8 236 67.8
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 5.1e-84 315.1 252 64.3
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 1.5e-83 313.5 256 65.2
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 1.9e-83 313.2 254 65.4
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 2.5e-83 312.8 211 72.5
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 3.3e-83 312.4 209 73.7
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 9.6e-83 310.8 259 61.0
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 1.3e-82 310.5 269 62.1
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 3.7e-82 308.9 258 63.2
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 4.8e-82 308.5 205 72.2
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 8.2e-82 307.8 207 73.4
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 8.2e-82 307.8 244 65.2
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 1.1e-81 307.4 204 75.0
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 1.4e-81 307.0 255 64.3
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 1.8e-81 306.6 278 59.7
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 3.1e-81 305.8 212 72.6
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 4.0e-81 305.4 228 65.4
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 4.0e-81 305.4 256 63.3
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 5.3e-81 305.1 217 68.2
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 9.0e-81 304.3 254 65.0
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 1.2e-80 303.9 204 70.6
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 5.8e-80 301.6 247 61.1
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 5.8e-80 301.6 243 65.4
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 1.7e-79 300.1 197 73.6
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 2.2e-79 299.7 205 71.2
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 3.8e-79 298.9 214 69.2
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 3.8e-79 298.9 202 73.8
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.1e-78 297.4 211 68.7
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 1.4e-78 297.0 184 76.6
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 3.2e-78 295.8 184 76.6
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 3.2e-78 295.8 184 76.6
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 4.2e-78 295.4 184 75.5
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 1.2e-77 293.9 232 62.9
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 1.2e-77 293.9 213 68.5
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 1.2e-77 293.9 173 79.8
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 6.0e-77 291.6 177 78.0
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 7.9e-77 291.2 204 70.1
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 1.0e-76 290.8 202 70.3
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 3.0e-76 289.3 176 76.7
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 2.5e-75 286.2 189 72.5
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 4.1e-73 278.9 236 58.9
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 4.1e-73 278.9 194 67.0
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 1.5e-72 276.9 194 66.5
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 3.4e-72 275.8 172 76.2
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 3.8e-71 272.3 206 66.0
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 1.9e-70 270.0 161 77.6
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 1.9e-70 270.0 233 60.5
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 4.2e-70 268.9 212 60.8
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 5.5e-70 268.5 228 59.6
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 9.3e-70 267.7 245 57.1
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 1.6e-69 266.9 264 56.4
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 6.1e-69 265.0 205 62.9
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 3.3e-67 259.2 243 60.5
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 1.7e-66 256.9 149 78.5
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 7.7e-64 248.1 172 68.6
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 1.9e-62 243.4 176 68.2
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 6.7e-60 235.0 225 55.6
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 2.8e-58 229.6 198 56.6
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 1.5e-56 223.8 186 59.7
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 4.5e-56 222.2 214 53.3
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 2.8e-50 203.0 120 74.2
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 2.0e-48 196.8 187 54.0
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 1.5e-46 190.7 252 41.7
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.6e-45 187.2 182 53.8
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 1.6e-40 170.6 152 65.8
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 9.4e-38 161.4 158 60.1
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 4.8e-34 149.1 96 67.7
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 1.2e-32 144.4 164 54.9
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 3.5e-32 142.9 151 57.6
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 4.3e-22 109.4 171 37.4
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 1.6e-21 107.5 111 58.6
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 2.8e-21 106.7 116 57.8
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 4.7e-21 105.9 124 54.8
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 4.7e-21 105.9 177 37.9
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 8.0e-21 105.1 116 57.8
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 1.5e-19 100.9 116 56.9
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.5e-14 84.3 62 56.5
arahy.Tifrunner.gnm1.ann1.XS5A0Y Arachis hypogaea HOM05D006376 ORTHO05D008046 4.3e-14 82.8 72 66.7
Dinv17636 Davidia involucrata HOM05D012663 ORTHO05D004533 4.7e-13 79.3 47 87.2
arahy.Tifrunner.gnm1.ann1.PN4BM4 Arachis hypogaea HOM05D001163 ORTHO05D001769 1.3e-10 71.2 104 49.0
arahy.Tifrunner.gnm1.ann1.QNQ2AZ Arachis hypogaea HOM05D006376 ORTHO05D008046 4.9e-10 69.3 91 53.8
SMO137G0132 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 3.2e-09 66.6 73 52.1
SMO170G0025 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 2.1e-08 63.9 94 45.7
VMungo0647G1967 Vigna mungo HOM05D006376 ORTHO05D008046 7.3e-06 55.5 39 79.5


User provided reference genes

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