Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13419 Davidia involucrata HOM05D006595 ORTHO05D008238 2.2e-92 342.4 190 100.0
Prupe.6G012000 Prunus persica HOM05D006595 ORTHO05D008238 2.1e-58 229.6 191 73.8
Peaxi162Scf00441g00213 Petunia axillaris HOM05D006595 ORTHO05D008238 2.3e-57 226.1 190 71.1
Ciclev10016858m.g Citrus clementina HOM05D006595 ORTHO05D008238 1.1e-56 223.8 175 76.0
Duzib168G0997 Durio zibethinus HOM05D006595 ORTHO05D008238 2.5e-56 222.6 185 73.5
Dinv34743 Davidia involucrata HOM05D006595 ORTHO05D008238 3.3e-56 222.2 131 96.9
Manes.03G089200 Manihot esculenta HOM05D006595 ORTHO05D008238 4.3e-56 221.9 182 74.7
TAR636G1600 Trochodendron aralioides HOM05D006595 ORTHO05D008238 5.6e-56 221.5 187 73.8
Atru.chr3.2190 Acer truncatum HOM05D006595 ORTHO05D008238 9.6e-56 220.7 181 74.0
PGSC0003DMG401032143 Solanum tuberosum HOM05D006595 ORTHO05D008238 1.3e-55 220.3 192 71.9
Nn7g35969 Nelumbo nucifera HOM05D006595 ORTHO05D008238 1.6e-55 219.9 190 70.0
Rhsim13G0228400 Rhododendron simsii HOM05D000750 ORTHO05D000714 4.8e-55 218.4 162 82.1
RcHm_v2.0_Chr5g0081351 Rosa chinensis HOM05D006595 ORTHO05D008238 1.8e-54 216.5 181 74.6
GSVIVG01025384001 Vitis vinifera HOM05D006595 ORTHO05D008238 1.8e-54 216.5 190 71.6
FAN17G0104 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.4e-54 216.1 191 71.7
FvH4_3g44681 Fragaria vesca HOM05D006595 ORTHO05D008238 6.9e-54 214.5 181 74.0
Sopen01g002130 Solanum pennellii HOM05D006595 ORTHO05D008238 1.2e-53 213.8 192 70.3
FAN25G3451 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.5e-53 213.4 181 74.0
SalBow6G7140 Salvia bowleyana HOM05D006595 ORTHO05D008238 2.0e-53 213.0 192 69.8
FAN21G3045 Fragaria x ananassa HOM05D000750 ORTHO05D000714 2.6e-53 212.6 185 73.0
MD03G1011600 Malus domestica HOM05D006595 ORTHO05D008238 2.6e-53 212.6 190 70.5
Oeu038858.2 Olea europaea HOM05D006595 ORTHO05D008238 5.8e-53 211.5 190 74.2
SGA_v2.0_scaffold78G25462 Striga asiatica HOM05D006595 ORTHO05D008238 5.8e-53 211.5 195 71.3
Potri.001G009800 Populus trichocarpa HOM05D006595 ORTHO05D008238 7.6e-53 211.1 194 71.1
CiPaw.13G171400 Carya illinoinensis HOM05D006595 ORTHO05D008238 9.9e-53 210.7 180 72.8
EL10Ac4g10339 Beta vulgaris HOM05D006595 ORTHO05D008238 1.7e-52 209.9 180 71.7
Gohir.A11G206900 Gossypium hirsutum HOM05D006595 ORTHO05D008238 1.7e-52 209.9 185 69.2
Lj2A706G26 Lonicera japonica HOM05D006595 ORTHO05D008238 2.2e-52 209.5 164 78.7
CAN.G140.24 Capsicum annuum HOM05D006595 ORTHO05D008238 2.9e-52 209.1 191 69.6
CSS0011176 Camellia sinensis var. sinensis HOM05D006595 ORTHO05D008238 4.9e-52 208.4 163 81.6
Gohir.D11G216800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 4.9e-52 208.4 185 68.6
Gohir.D08G088800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 1.1e-51 207.2 185 68.1
Gorai.004G093500 Gossypium raimondii HOM05D006595 ORTHO05D008238 1.4e-51 206.8 185 68.1
Gohir.A08G079300 Gossypium hirsutum HOM05D006595 ORTHO05D008238 1.9e-51 206.5 181 69.1
FAN16G1668 Fragaria x ananassa HOM05D000750 ORTHO05D000714 2.4e-51 206.1 185 71.4
Solyc01g006130.4 Solanum lycopersicum HOM05D006595 ORTHO05D008238 3.2e-51 205.7 188 69.7
QL01p010272 Quercus lobata HOM05D006595 ORTHO05D008238 4.2e-51 205.3 164 75.6
MSTRG.8324 Avicennia marina HOM05D006595 ORTHO05D008238 7.1e-51 204.5 195 69.2
Sed0019652 Sechium edule HOM05D006595 ORTHO05D008238 7.1e-51 204.5 169 73.4
AUR62019207 Chenopodium quinoa HOM05D006595 ORTHO05D008238 2.1e-50 203.0 179 70.4
TWI34G0416 Tripterygium wilfordii HOM05D006595 ORTHO05D008238 2.1e-50 203.0 182 72.5
Gorai.007G232900 Gossypium raimondii HOM05D006595 ORTHO05D008238 2.7e-50 202.6 163 73.0
Haze_22995 Corylus avellana HOM05D006595 ORTHO05D008238 4.6e-50 201.8 168 75.0
CsaV3_4G023550 Cucumis sativus L. HOM05D006595 ORTHO05D008238 4.6e-50 201.8 182 69.8
MSTRG.208 Avicennia marina HOM05D006595 ORTHO05D008238 1.0e-49 200.7 192 69.3
Cfa009626 Carpinus fangiana HOM05D006595 ORTHO05D008238 1.7e-49 199.9 168 74.4
ClCG02G023820 Citrullus lanatus HOM05D006595 ORTHO05D008238 3.0e-49 199.1 181 70.2
Sabra01G0007800 Salix brachista HOM05D006595 ORTHO05D008238 5.1e-49 198.4 202 65.8
AUR62000037 Chenopodium quinoa HOM05D006595 ORTHO05D008238 6.6e-49 198.0 182 69.2
Nitab4.5_0001620g0030 Nicotiana tabacum HOM05D006595 ORTHO05D008238 6.6e-49 198.0 192 58.3
MELO3C014661.2 Cucumis melo HOM05D006595 ORTHO05D008238 1.9e-48 196.4 180 70.6
CANSAT11G0726 Cannabis sativa HOM05D006595 ORTHO05D008238 4.3e-48 195.3 189 67.2
Nitab4.5_0005477g0080 Nicotiana tabacum HOM05D006595 ORTHO05D008238 9.6e-48 194.1 192 57.8
Cpa.g.sc119.91 Carica papaya HOM05D006595 ORTHO05D008238 4.8e-47 191.8 192 67.7
Migut.F01376 Erythranthe guttata HOM05D006595 ORTHO05D008238 4.8e-47 191.8 195 68.2
PGR102G3301 Punica granatum HOM05D006595 ORTHO05D008238 3.1e-46 189.1 187 67.4
Aqoxy2G00094 Aquilegia oxysepala HOM05D006595 ORTHO05D008238 4.0e-46 188.7 185 63.8
COL.COLO4_10447 Corchorus olitorius HOM05D006595 ORTHO05D008238 9.0e-46 187.6 196 53.1
Thecc.09G215500 Theobroma cacao HOM05D006595 ORTHO05D008238 1.5e-45 186.8 136 66.9
Cc01_g00990 Coffea canephora HOM05D006595 ORTHO05D008238 2.0e-45 186.4 189 64.6
CDE04G0274 Ceratophyllum demersum HOM05D006595 ORTHO05D008238 3.4e-45 185.7 192 64.6
Phvul.007G006200 Phaseolus vulgaris HOM05D006595 ORTHO05D008238 5.8e-45 184.9 187 63.6
Lj5g0010961 Lotus japonicus HOM05D006595 ORTHO05D008238 1.3e-44 183.7 180 65.6
PSO384G3168 Papaver somniferum HOM05D006595 ORTHO05D008238 2.2e-44 183.0 190 61.1
vmacro04249 Vaccinium macrocarpon HOM05D006595 ORTHO05D008238 2.2e-44 183.0 303 40.9
ECA248G3199 Erigeron canadensis HOM05D006595 ORTHO05D008238 6.4e-44 181.4 152 74.3
PSO339G5391 Papaver somniferum HOM05D006595 ORTHO05D008238 6.4e-44 181.4 190 60.0
THA.LOC104815114 Tarenaya hassleriana HOM05D006595 ORTHO05D008238 6.4e-44 181.4 191 64.4
Sc16g0012000 Simmondsia chinensis HOM05D006595 ORTHO05D008238 2.4e-43 179.5 187 65.8
Eucgr.B03632 Eucalyptus grandis HOM05D006595 ORTHO05D008238 1.2e-42 177.2 179 68.7
Lj2A705G49 Lonicera japonica HOM05D006595 ORTHO05D008238 1.8e-41 173.3 133 69.9
Ah.04g161600 Amaranthus hybridus HOM05D000750 ORTHO05D000714 8.7e-41 171.0 152 71.7
Sp4g17140 Schrenkiella parvula HOM05D006595 ORTHO05D008238 1.6e-39 166.8 187 61.5
AT2G34860 Arabidopsis thaliana HOM05D006595 ORTHO05D008238 8.1e-39 164.5 188 62.2
Thhalv10017283m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 1.1e-38 164.1 187 62.6
Aa31sc409G10 Aethionema arabicum HOM05D006595 ORTHO05D008238 1.4e-38 163.7 173 63.6
Glyma.10G293900 Glycine max HOM05D006595 ORTHO05D008238 1.4e-38 163.7 183 62.3
Carub.0004s1654 Capsella rubella HOM05D006595 ORTHO05D008238 4.0e-38 162.2 191 61.3
CARHR129020 Cardamine hirsuta HOM05D006595 ORTHO05D008238 3.4e-37 159.1 179 61.5
A04p26620 Brassica napus HOM05D006595 ORTHO05D008238 1.0e-36 157.5 182 62.1
BraA04t18167Z Brassica rapa HOM05D006595 ORTHO05D008238 1.3e-36 157.1 182 61.0
BcaC02g07751 Brassica carinata HOM05D006595 ORTHO05D008238 1.7e-36 156.8 182 61.0
BolC4t27880H Brassica oleracea HOM05D006595 ORTHO05D008238 1.7e-36 156.8 182 61.0
Medtr1g116170 Medicago truncatula HOM05D006595 ORTHO05D008238 4.9e-36 155.2 139 73.4
Psat6g238960 Pisum sativum HOM05D006595 ORTHO05D008238 6.5e-36 154.8 181 61.3
C04p64040 Brassica napus HOM05D006595 ORTHO05D008238 8.4e-36 154.5 182 61.5
Os08g0463900 Oryza sativa ssp. japonica HOM05D006595 ORTHO05D008238 1.9e-35 153.3 133 70.7
BraA05t20025Z Brassica rapa HOM05D006595 ORTHO05D008238 2.5e-35 152.9 164 65.2
BcaB06g28828 Brassica carinata HOM05D006595 ORTHO05D008238 4.2e-35 152.1 182 62.1
C04p13910 Brassica napus HOM05D006595 ORTHO05D008238 4.2e-35 152.1 183 61.2
BolC4t22980H Brassica oleracea HOM05D006595 ORTHO05D008238 4.2e-35 152.1 183 61.2
arahy.Tifrunner.gnm1.ann1.ZL64GD Arachis hypogaea HOM05D006595 ORTHO05D008238 7.1e-35 151.4 140 71.4
BcaC02g11570 Brassica carinata HOM05D006595 ORTHO05D008238 7.1e-35 151.4 183 61.2
Lalb_Chr02g0143771 Lupinus albus HOM05D006595 ORTHO05D008238 1.2e-34 150.6 189 57.7
Lsat_1_v5_gn_1_68280 Lactuca sativa HOM05D006595 ORTHO05D008238 1.6e-34 150.2 150 58.7
A05p10810 Brassica napus HOM05D006595 ORTHO05D008238 2.1e-34 149.8 164 65.2
Ca_11377_v3 Cicer arietinum L. HOM05D001261 ORTHO05D001130 2.7e-34 149.4 179 60.3
TPR.G10430 Trifolium pratense HOM05D006595 ORTHO05D008238 6.0e-34 148.3 128 77.3
HPP92_016182 Vanilla planifolia HOM05D006595 ORTHO05D008238 7.9e-34 147.9 192 57.3
HPP92_026734 Vanilla planifolia HOM05D006595 ORTHO05D008238 1.0e-33 147.5 165 63.6
Hund06674 Selenicereus undatus HOM05D006595 ORTHO05D008238 3.9e-33 145.6 126 75.4
HanXRQChr11g0344931 Helianthus annuus HOM05D006595 ORTHO05D008238 3.3e-32 142.5 143 57.3
Glyma.20G243800 Glycine max HOM05D006595 ORTHO05D008238 1.4e-30 137.1 100 83.0
unitig_747.g21415 Utricularia gibba HOM05D006595 ORTHO05D008238 4.1e-30 135.6 201 54.2
ATR1149G131 Amborella trichopoda HOM05D006595 ORTHO05D008238 9.0e-30 134.4 89 92.1
arahy.Tifrunner.gnm1.ann1.SSSL8J Arachis hypogaea HOM05D006595 ORTHO05D008238 2.0e-29 133.3 132 68.9
QL01p010258 Quercus lobata HOM05D006595 ORTHO05D008238 1.3e-28 130.6 123 55.3
QL08p062509 Quercus lobata HOM05D006595 ORTHO05D008238 1.3e-28 130.6 123 55.3
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.9e-28 129.4 161 57.1
SEGI_11759 Sequoiadendron giganteum HOM05D006595 ORTHO05D008238 8.4e-28 127.9 156 59.6
VMungo0720G3035 Vigna mungo HOM05D006595 ORTHO05D008238 7.2e-27 124.8 133 51.9
Mapoly0120s0023 Marchantia polymorpha HOM05D006595 ORTHO05D008238 2.1e-26 123.2 125 67.2
FAN11G2269 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.0e-25 120.9 235 39.6
AL4G30870 Arabidopsis lyrata HOM05D006595 ORTHO05D008238 3.0e-25 119.4 184 44.0
Pp3c3_12490 Physcomitrium patens HOM05D006595 ORTHO05D008238 5.7e-24 115.2 176 50.6
SMO331G0037 Selaginella moellendorffii HOM05D006595 ORTHO05D008238 2.2e-23 113.2 85 84.7
MD11G1014500 Malus domestica HOM05D006595 ORTHO05D008238 8.2e-23 111.3 76 71.1
CBR_g22940 Chara braunii HOM05D006595 ORTHO05D008238 9.0e-22 107.8 148 54.7
FAN16G0514 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.5e-21 105.5 74 67.6
FvH4_3g44571 Fragaria vesca HOM05D006595 ORTHO05D008238 2.9e-20 102.8 74 66.2
PRCOL_00006415 Prasinoderma coloniale HOM05D006595 ORTHO05D008238 2.3e-17 93.2 96 65.6
BcaC07g42181 Brassica carinata HOM05D006595 ORTHO05D008238 3.0e-17 92.8 169 42.6
MCO03G122 Micromonas commoda HOM05D006595 ORTHO05D008238 4.3e-16 89.0 113 58.4
Cre11.g475850 Chlamydomonas reinhardtii HOM05D006595 ORTHO05D008238 8.2e-15 84.7 83 54.2
BcaB01g02723 Brassica carinata HOM05D006595 ORTHO05D008238 1.4e-14 84.0 146 40.4
Thhalv10012349m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 1.3e-12 77.4 61 65.6
BcaB06g29011 Brassica carinata HOM05D006595 ORTHO05D008238 8.5e-12 74.7 146 38.4
BcaB01g03109 Brassica carinata HOM05D006595 ORTHO05D008238 6.1e-10 68.6 79 49.4
Pp3c4_29200 Physcomitrium patens HOM05D006595 ORTHO05D008238 8.2e-07 58.2 110 34.5
FAN21G2764 Fragaria x ananassa HOM05D006595 ORTHO05D008238 3.1e-06 56.2 30 83.3
Thhalv10011829m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 4.1e-06 55.8 68 42.6


User provided reference genes

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