Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13362 Davidia involucrata HOM05D006003 ORTHO05D007388 1.5e-178 629.4 313 100.0
Hma1.2p1_0050F.1_g028770 Hydrangea macrophylla HOM05D006003 ORTHO05D007388 1.4e-149 533.1 313 84.3
CSS0003385 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 7.4e-146 520.8 313 82.1
CSS0022288 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 8.2e-145 517.3 313 81.5
Rhsim06G0211900 Rhododendron simsii HOM05D006003 ORTHO05D007388 1.9e-141 506.1 335 76.7
vmacro11973 Vaccinium macrocarpon HOM05D006003 ORTHO05D007388 7.1e-141 504.2 319 79.9
Actinidia12605 Actinidia chinensis HOM05D006003 ORTHO05D007388 3.0e-139 498.8 316 80.4
CAN.G375.51 Capsicum annuum HOM05D006003 ORTHO05D007388 2.2e-137 492.7 316 77.5
TAR626G1650 Trochodendron aralioides HOM05D006003 ORTHO05D007388 3.7e-137 491.9 316 75.9
Nitab4.5_0003230g0040 Nicotiana tabacum HOM05D006003 ORTHO05D007388 2.6e-135 485.7 313 76.7
TWI39G0770 Tripterygium wilfordii HOM05D006003 ORTHO05D007388 3.4e-135 485.3 311 74.6
MD11G1270000 Malus domestica HOM05D006003 ORTHO05D007388 4.2e-133 478.4 310 74.5
Sabra11G0081200 Salix brachista HOM05D006003 ORTHO05D007388 7.2e-133 477.6 308 76.6
Potri.011G104400 Populus trichocarpa HOM05D006003 ORTHO05D007388 2.1e-132 476.1 308 76.0
Ciclev10021233m.g Citrus clementina HOM05D006003 ORTHO05D007388 2.7e-132 475.7 314 74.2
Cc05_g10700 Coffea canephora HOM05D006003 ORTHO05D007388 3.6e-132 475.3 316 75.3
Manes.15G098700 Manihot esculenta HOM05D006003 ORTHO05D007388 4.6e-132 474.9 307 74.6
Atru.chr2.1938 Acer truncatum HOM05D006003 ORTHO05D007388 1.8e-131 473.0 313 73.5
Nitab4.5_0000347g0030 Nicotiana tabacum HOM05D006003 ORTHO05D007388 1.8e-131 473.0 303 77.2
PGSC0003DMG400007060 Solanum tuberosum HOM05D006003 ORTHO05D007388 2.3e-131 472.6 316 74.7
Gohir.A01G047600 Gossypium hirsutum HOM05D006003 ORTHO05D007388 5.1e-131 471.5 307 73.3
Gorai.002G047000 Gossypium raimondii HOM05D006003 ORTHO05D007388 1.1e-130 470.3 307 73.0
GSVIVG01014095001 Vitis vinifera HOM05D006003 ORTHO05D007388 1.1e-130 470.3 316 73.7
Eucgr.F03233 Eucalyptus grandis HOM05D006003 ORTHO05D007388 1.5e-130 469.9 316 73.4
Sabra11G0076500 Salix brachista HOM05D006003 ORTHO05D007388 1.5e-130 469.9 308 75.3
Thecc.07G133000 Theobroma cacao HOM05D006003 ORTHO05D007388 2.5e-130 469.2 313 72.5
Atru.chr2.1967 Acer truncatum HOM05D006003 ORTHO05D007388 3.3e-130 468.8 313 72.8
TAR624G1186 Trochodendron aralioides HOM05D006003 ORTHO05D007388 1.7e-129 466.5 363 65.3
DCAR_019616 Daucus carota HOM05D006003 ORTHO05D007388 6.3e-129 464.5 319 71.5
Sopen07g030420 Solanum pennellii HOM05D006003 ORTHO05D007388 6.9e-128 461.1 316 73.4
CANSAT56G1876 Cannabis sativa HOM05D006003 ORTHO05D007388 1.2e-127 460.3 313 73.2
Prupe.4G156300 Prunus persica HOM05D006003 ORTHO05D007388 3.4e-127 458.8 315 71.7
HanXRQChr14g0439341 Helianthus annuus HOM05D006003 ORTHO05D007388 5.9e-127 458.0 311 70.7
Prupe.4G156400 Prunus persica HOM05D006003 ORTHO05D007388 5.9e-127 458.0 313 71.2
Cpa.g.sc77.63 Carica papaya HOM05D006003 ORTHO05D007388 2.2e-126 456.1 313 72.2
Solyc07g062150.3 Solanum lycopersicum HOM05D006003 ORTHO05D007388 3.8e-126 455.3 316 72.8
AUR62019651 Chenopodium quinoa HOM05D006003 ORTHO05D007388 8.5e-126 454.1 312 70.2
PGR031G3165 Punica granatum HOM05D006003 ORTHO05D007388 4.2e-125 451.8 313 71.9
PGR083G1570 Punica granatum HOM05D006003 ORTHO05D007388 1.8e-123 446.4 312 69.9
Peaxi162Scf00111g01321 Petunia axillaris HOM05D006003 ORTHO05D007388 2.3e-123 446.0 283 78.4
Lj8A146G66 Lonicera japonica HOM05D006003 ORTHO05D007388 6.7e-123 444.5 304 74.3
Eucgr.F01368 Eucalyptus grandis HOM05D006003 ORTHO05D007388 2.2e-121 439.5 315 69.5
MSTRG.6692 Avicennia marina HOM05D006003 ORTHO05D007388 2.4e-120 436.0 318 69.8
FvH4_3g17730 Fragaria vesca HOM05D006003 ORTHO05D007388 5.3e-120 434.9 310 69.7
ClCG07G010140 Citrullus lanatus HOM05D006003 ORTHO05D007388 7.0e-120 434.5 311 66.6
Medtr2g073350 Medicago truncatula HOM05D006003 ORTHO05D007388 7.0e-120 434.5 311 68.5
FAN16G0946 Fragaria x ananassa HOM05D006003 ORTHO05D007388 1.5e-119 433.3 310 69.7
Ah.04g164020 Amaranthus hybridus HOM05D006003 ORTHO05D007388 4.5e-119 431.8 312 68.6
Lj1C824T4 Lonicera japonica HOM05D006003 ORTHO05D007388 5.9e-119 431.4 281 76.9
CsaV3_4G008190 Cucumis sativus L. HOM05D006003 ORTHO05D007388 7.7e-119 431.0 312 66.0
HanXRQChr13g0389731 Helianthus annuus HOM05D006003 ORTHO05D007388 1.3e-118 430.3 311 68.5
MELO3C016117.2 Cucumis melo HOM05D006003 ORTHO05D007388 1.7e-118 429.9 312 66.3
EL10Ac4g08418 Beta vulgaris HOM05D006003 ORTHO05D007388 2.2e-118 429.5 314 67.2
MD11G1270100 Malus domestica HOM05D006003 ORTHO05D007388 2.2e-118 429.5 311 66.6
FAN25G0059 Fragaria x ananassa HOM05D006003 ORTHO05D007388 6.5e-118 427.9 325 66.5
Haze_09249 Corylus avellana HOM05D006003 ORTHO05D007388 8.5e-118 427.6 312 67.9
Ca_03928_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 1.9e-117 426.4 311 66.9
Ca_30126_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 1.9e-117 426.4 311 66.9
Lj3g0003080 Lotus japonicus HOM05D006003 ORTHO05D007388 9.4e-117 424.1 310 68.1
Migut.M00692 Erythranthe guttata HOM05D006003 ORTHO05D007388 1.2e-116 423.7 316 69.6
Lj3g0000598 Lotus japonicus HOM05D006003 ORTHO05D007388 1.6e-116 423.3 310 68.1
Sc16g0007750 Simmondsia chinensis HOM05D006003 ORTHO05D007388 8.0e-116 421.0 281 70.5
Sed0005123 Sechium edule HOM05D006003 ORTHO05D007388 1.0e-115 420.6 311 65.3
QL08p024148 Quercus lobata HOM05D006003 ORTHO05D007388 3.0e-115 419.1 312 67.0
Oeu005377.2 Olea europaea HOM05D006003 ORTHO05D007388 5.2e-115 418.3 281 73.7
Glyma.12G234000 Glycine max HOM05D006003 ORTHO05D007388 2.6e-114 416.0 312 66.7
Glyma.13G264900 Glycine max HOM05D006003 ORTHO05D007388 9.7e-114 414.1 313 66.8
Dinv26706 Davidia involucrata HOM05D006003 ORTHO05D007388 1.3e-113 413.7 233 89.7
Oeu059254.1 Olea europaea HOM05D006003 ORTHO05D007388 1.7e-113 413.3 282 72.7
TPR.G12996 Trifolium pratense HOM05D006003 ORTHO05D007388 1.8e-112 409.8 276 71.7
Cfa019519 Carpinus fangiana HOM05D006003 ORTHO05D007388 2.4e-112 409.5 293 67.9
Gohir.D01G038300 Gossypium hirsutum HOM05D006003 ORTHO05D007388 3.1e-112 409.1 267 73.4
Lalb_Chr20g0109151 Lupinus albus HOM05D006003 ORTHO05D007388 3.1e-112 409.1 313 65.2
HPP92_006378 Vanilla planifolia HOM05D006003 ORTHO05D007388 5.3e-112 408.3 307 65.8
Psat5g233200 Pisum sativum HOM05D006003 ORTHO05D007388 2.6e-111 406.0 311 65.6
FAN21G1616 Fragaria x ananassa HOM05D006003 ORTHO05D007388 7.7e-111 404.4 310 66.5
SGA_v2.0_scaffold181G39767 Striga asiatica HOM05D006003 ORTHO05D007388 2.2e-110 402.9 326 64.1
Lsat_1_v5_gn_9_100380 Lactuca sativa HOM05D006003 ORTHO05D007388 5.5e-109 398.3 312 65.1
Duzib268G1415 Durio zibethinus HOM05D006003 ORTHO05D007388 6.7e-107 391.3 240 80.0
ECA240G1635 Erigeron canadensis HOM05D006003 ORTHO05D007388 3.3e-106 389.0 280 67.9
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 5.7e-106 388.3 312 63.8
PSO675G5422 Papaver somniferum HOM05D006003 ORTHO05D007388 9.7e-106 387.5 334 58.1
MD03G1247500 Malus domestica HOM05D006003 ORTHO05D007388 1.3e-105 387.1 276 71.0
PSO541G5634 Papaver somniferum HOM05D006003 ORTHO05D007388 1.3e-105 387.1 334 57.8
THA.LOC104813991 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 4.1e-104 382.1 314 60.2
Os09g0345700 Oryza sativa ssp. japonica HOM05D006003 ORTHO05D007388 1.6e-103 380.2 321 58.6
SalBow8G3868 Salvia bowleyana HOM05D006003 ORTHO05D007388 2.7e-103 379.4 312 63.8
Nn6g34421 Nelumbo nucifera HOM05D006003 ORTHO05D007388 1.7e-102 376.7 240 75.8
COL.COLO4_17472 Corchorus olitorius HOM05D006003 ORTHO05D007388 2.9e-102 375.9 313 62.6
MBI06_g08515_MAGBIO Magnolia biondii HOM05D006003 ORTHO05D007388 2.5e-101 372.9 279 65.9
CARHR072080 Cardamine hirsuta HOM05D006003 ORTHO05D007388 7.2e-101 371.3 307 61.6
BcaC08g47430 Brassica carinata HOM05D006003 ORTHO05D007388 1.2e-100 370.5 307 60.9
ATR0602G094 Amborella trichopoda HOM05D006003 ORTHO05D007388 2.7e-100 369.4 286 64.7
A07p43860 Brassica napus HOM05D006003 ORTHO05D007388 2.7e-100 369.4 307 60.6
C06p52490 Brassica napus HOM05D006003 ORTHO05D007388 2.7e-100 369.4 307 60.3
BolC6t40268H Brassica oleracea HOM05D006003 ORTHO05D007388 2.7e-100 369.4 307 60.3
BraA07t31893Z Brassica rapa HOM05D006003 ORTHO05D007388 2.7e-100 369.4 307 60.6
Thhalv10018897m.g Eutrema salsugineum HOM05D006003 ORTHO05D007388 8.0e-100 367.9 309 60.2
THA.LOC104808088 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 3.0e-99 365.9 314 59.9
AL2G38990 Arabidopsis lyrata HOM05D006003 ORTHO05D007388 5.2e-99 365.2 307 60.9
BcaC03g15825 Brassica carinata HOM05D006003 ORTHO05D007388 3.4e-98 362.5 307 60.3
arahy.Tifrunner.gnm1.ann1.U60PIC Arachis hypogaea HOM05D006003 ORTHO05D007388 7.5e-98 361.3 311 60.8
A02p22240 Brassica napus HOM05D006003 ORTHO05D007388 7.5e-98 361.3 307 60.3
C02p35670 Brassica napus HOM05D006003 ORTHO05D007388 9.8e-98 360.9 307 59.9
BolC2t09587H Brassica oleracea HOM05D006003 ORTHO05D007388 9.8e-98 360.9 307 59.9
BraA02t07230Z Brassica rapa HOM05D006003 ORTHO05D007388 2.2e-97 359.8 307 59.9
Carub.0002s2544 Capsella rubella HOM05D006003 ORTHO05D007388 2.2e-97 359.8 307 59.6
Sp5g33680 Schrenkiella parvula HOM05D006003 ORTHO05D007388 3.7e-97 359.0 307 59.3
Aa31LG4G2370 Aethionema arabicum HOM05D006003 ORTHO05D007388 4.8e-97 358.6 308 58.4
AT1G78590 Arabidopsis thaliana HOM05D006003 ORTHO05D007388 8.3e-97 357.8 307 59.6
CiPaw.11G156000 Carya illinoinensis HOM05D006003 ORTHO05D007388 5.0e-94 348.6 275 64.7
SHI27565 Sapria himalayana HOM05D006003 ORTHO05D007388 1.5e-93 347.1 253 66.4
BcaB05g25146 Brassica carinata HOM05D006003 ORTHO05D007388 4.0e-91 339.0 279 60.6
CDE10G0670 Ceratophyllum demersum HOM05D000595 ORTHO05D001274 4.0e-91 339.0 266 62.0
CDE04G1397 Ceratophyllum demersum HOM05D006003 ORTHO05D007388 6.8e-91 338.2 260 65.4
Sc03g0010720 Simmondsia chinensis HOM05D006003 ORTHO05D007388 1.4e-88 330.5 280 61.4
Phvul.005G076600 Phaseolus vulgaris HOM05D006003 ORTHO05D007388 1.3e-86 323.9 313 55.9
Pp3c14_23600 Physcomitrium patens HOM05D006003 ORTHO05D007388 4.6e-79 298.9 328 48.5
Mapoly0214s0005 Marchantia polymorpha HOM05D006003 ORTHO05D007388 1.5e-77 293.9 316 48.4
SMO169G0094 Selaginella moellendorffii HOM05D006003 ORTHO05D007388 2.1e-76 290.0 276 52.9
CBR_g12698 Chara braunii HOM05D006003 ORTHO05D007388 3.5e-71 272.7 324 43.8
Zm00001eb098430 Zea mays HOM05D006003 ORTHO05D007388 2.2e-65 253.4 199 61.8
FAN11G1972 Fragaria x ananassa HOM05D006003 ORTHO05D007388 1.0e-54 218.0 191 58.6
MD03G1248900 Malus domestica HOM05D006003 ORTHO05D007388 3.6e-52 209.5 195 62.1
SalBow7G3240 Salvia bowleyana HOM05D006003 ORTHO05D007388 5.8e-50 202.2 170 60.0
RcHm_v2.0_Chr5g0029501 Rosa chinensis HOM05D006003 ORTHO05D007388 3.5e-47 193.0 137 68.6
AUR62039577 Chenopodium quinoa HOM05D006003 ORTHO05D007388 2.9e-41 173.3 109 70.6
MCO14G555 Micromonas commoda HOM05D006003 ORTHO05D007388 1.1e-40 171.4 282 39.0
RcHm_v2.0_Chr5g0029511 Rosa chinensis HOM05D006003 ORTHO05D007388 4.0e-35 152.9 114 68.4
Psat5g275400 Pisum sativum HOM05D006003 ORTHO05D007388 9.0e-27 125.2 113 54.9
PRCOL_00004450 Prasinoderma coloniale HOM05D006003 ORTHO05D007388 1.8e-14 84.3 272 28.7
CDE03G0511 Ceratophyllum demersum HOM05D006003 ORTHO05D007388 4.8e-12 76.3 138 38.4


User provided reference genes

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