Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 6.9e-137 490.7 263 100.0
Dinv13238 Davidia involucrata HOM05D004728 ORTHO05D002375 1.9e-33 147.1 220 44.1
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 8.4e-26 121.7 216 38.0
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 1.7e-23 114.0 190 48.4
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 2.8e-21 106.7 174 49.4
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.8e-21 106.7 174 49.4
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.4e-17 94.4 147 51.7
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 5.4e-17 92.4 237 36.7
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 7.9e-16 88.6 206 32.0
FAN26G2532 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.9e-16 88.6 194 43.3
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 7.9e-16 88.6 252 38.1
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 1.1e-14 84.7 243 31.3
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 5.6e-14 82.4 166 42.2
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 7.4e-14 82.0 219 37.9
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 4.8e-13 79.3 175 41.1
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 1.4e-12 77.8 245 32.7
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 1.4e-12 77.8 231 35.5
Nitab4.5_0002996g0010 Nicotiana tabacum HOM05D019315 ORTHO05D002375 3.1e-12 76.6 229 35.8
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 4.0e-12 76.3 197 38.1
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 5.3e-12 75.9 246 36.2
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 5.8e-11 72.4 205 34.6
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 5.8e-11 72.4 230 30.4
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.3e-10 71.2 163 41.1
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 2.9e-10 70.1 193 24.9
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 2.9e-10 70.1 149 37.6
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.2e-09 66.6 151 37.1
Prupe.6G194000 Prunus persica HOM05D004728 ORTHO05D002375 4.2e-09 66.2 105 54.3
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.5e-09 65.9 151 37.1
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.5e-09 65.9 151 36.4
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 7.1e-09 65.5 144 41.7
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.2e-08 64.7 152 39.5
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.6e-08 64.3 150 37.3
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.1e-08 63.9 150 44.0
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 2.7e-08 63.5 155 35.5
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.5e-08 63.2 156 27.6
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.0e-08 62.4 258 24.4
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.0e-07 61.6 155 40.0
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.0e-07 61.6 155 40.0
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.0e-07 61.6 147 38.8
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.0e-07 61.6 216 32.9
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.0e-07 61.6 192 36.5
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 1.3e-07 61.2 162 30.2
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 1.3e-07 61.2 152 35.5
TAR376G0441 Trochodendron aralioides HOM05D004728 ORTHO05D002375 1.8e-07 60.8 211 35.5
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 2.3e-07 60.5 151 37.1
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 2.3e-07 60.5 159 31.4
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.0e-07 60.1 158 36.1
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 5.1e-07 59.3 146 38.4
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 5.1e-07 59.3 163 27.6
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 5.1e-07 59.3 148 35.1
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.7e-07 58.9 177 26.0
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 6.7e-07 58.9 150 39.3
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 8.7e-07 58.5 153 25.5
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 8.7e-07 58.5 152 36.8
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 1.1e-06 58.2 135 29.6
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.5e-06 57.8 158 35.4
DCAR_003464 Daucus carota HOM05D004728 ORTHO05D002375 1.5e-06 57.8 98 37.8
Prupe.6G194200 Prunus persica HOM05D004728 ORTHO05D002375 1.9e-06 57.4 104 33.7
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 2.5e-06 57.0 173 29.5
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 3.3e-06 56.6 173 31.2
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 3.3e-06 56.6 164 35.4
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 4.3e-06 56.2 157 39.5
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 4.3e-06 56.2 174 33.3
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 4.3e-06 56.2 151 35.1
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 5.6e-06 55.8 152 36.2
PGSC0003DMG400034902 Solanum tuberosum HOM05D019315 ORTHO05D002375 5.6e-06 55.8 58 55.2
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 7.4e-06 55.5 158 34.2
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 7.4e-06 55.5 178 33.7
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 9.6e-06 55.1 166 33.1


User provided reference genes

Program Settings