Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13133 Davidia involucrata HOM05D004454 ORTHO05D005462 2.6e-116 422.2 227 100.0
Dinv02657 Davidia involucrata HOM05D004454 ORTHO05D005462 1.1e-42 177.6 99 90.9
Hund02707 Selenicereus undatus HOM05D004454 ORTHO05D005462 1.4e-40 170.6 99 85.9
Hma1.2p1_0002F.1_g002910 Hydrangea macrophylla HOM05D004454 ORTHO05D005462 4.0e-40 169.1 99 84.8
Actinidia19078 Actinidia chinensis HOM05D004454 ORTHO05D005462 5.2e-40 168.7 99 87.9
DCAR_026102 Daucus carota HOM05D004454 ORTHO05D005462 3.3e-39 166.0 99 81.8
CSS0019873 Camellia sinensis var. sinensis HOM05D004454 ORTHO05D005462 5.7e-39 165.2 99 85.9
CSS0024488 Camellia sinensis var. sinensis HOM05D004454 ORTHO05D005462 5.7e-39 165.2 99 85.9
Manes.14G071000 Manihot esculenta HOM05D004454 ORTHO05D005462 9.7e-39 164.5 99 86.9
QL10p013674 Quercus lobata HOM05D004454 ORTHO05D005462 9.7e-39 164.5 99 86.9
Ciclev10019469m.g Citrus clementina HOM05D004454 ORTHO05D005462 1.3e-38 164.1 99 86.9
GSVIVG01000277001 Vitis vinifera HOM05D004454 ORTHO05D005462 1.3e-38 164.1 99 86.9
TWI60G0736 Tripterygium wilfordii HOM05D004454 ORTHO05D005462 1.7e-38 163.7 99 85.9
Lj9A454G67 Lonicera japonica HOM05D004454 ORTHO05D005462 2.8e-38 162.9 100 82.0
Nn4g22938 Nelumbo nucifera HOM05D004454 ORTHO05D005462 4.8e-38 162.2 99 83.8
AUR62008292 Chenopodium quinoa HOM05D004454 ORTHO05D005462 6.3e-38 161.8 99 81.8
Rhsim12G0161100 Rhododendron simsii HOM05D004454 ORTHO05D005462 8.2e-38 161.4 122 73.0
Prupe.5G180200 Prunus persica HOM05D004454 ORTHO05D005462 1.1e-37 161.0 99 84.8
Solyc03g113740.4 Solanum lycopersicum HOM05D004454 ORTHO05D005462 1.4e-37 160.6 102 79.4
Sopen03g032790 Solanum pennellii HOM05D004454 ORTHO05D005462 1.4e-37 160.6 102 79.4
PGSC0003DMG400024579 Solanum tuberosum HOM05D004454 ORTHO05D005462 1.4e-37 160.6 102 79.4
GSVIVG01022319001 Vitis vinifera HOM05D004454 ORTHO05D005462 1.4e-37 160.6 117 76.9
MD14G1188000 Malus domestica HOM05D004454 ORTHO05D005462 1.8e-37 160.2 99 85.9
Cfa019062 Carpinus fangiana HOM05D004454 ORTHO05D005462 3.1e-37 159.5 99 84.8
MBI01_g40850_MAGBIO Magnolia biondii HOM05D004454 ORTHO05D005462 3.1e-37 159.5 188 55.9
Nn3g17037 Nelumbo nucifera HOM05D004454 ORTHO05D005462 4.1e-37 159.1 99 82.8
Gohir.D10G224100 Gossypium hirsutum HOM05D004454 ORTHO05D005462 5.3e-37 158.7 99 82.8
Gorai.011G255100 Gossypium raimondii HOM05D004454 ORTHO05D005462 5.3e-37 158.7 99 82.8
Haze_07431 Corylus avellana HOM05D004454 ORTHO05D005462 7.0e-37 158.3 99 83.8
MD06G1182000 Malus domestica HOM05D004454 ORTHO05D005462 7.0e-37 158.3 99 84.8
Thecc.03G002900 Theobroma cacao HOM05D004454 ORTHO05D005462 1.6e-36 157.1 99 81.8
Gohir.A10G215100 Gossypium hirsutum HOM05D004454 ORTHO05D005462 2.0e-36 156.8 99 81.8
Duzib084G0805 Durio zibethinus HOM05D004454 ORTHO05D005462 2.6e-36 156.4 99 81.8
Lj3g0012006 Lotus japonicus HOM05D004454 ORTHO05D005462 2.6e-36 156.4 99 79.8
CAN.G853.25 Capsicum annuum HOM05D004454 ORTHO05D005462 3.5e-36 156.0 102 75.5
Potri.012G075000 Populus trichocarpa HOM05D004454 ORTHO05D005462 3.5e-36 156.0 99 80.8
Eucgr.B00321 Eucalyptus grandis HOM05D004454 ORTHO05D005462 4.5e-36 155.6 99 82.8
Cpa.g.sc35.32 Carica papaya HOM05D004454 ORTHO05D005462 7.7e-36 154.8 99 80.8
Eucgr.B00957 Eucalyptus grandis HOM05D004454 ORTHO05D005462 1.0e-35 154.5 99 81.8
Sabra12G0053400 Salix brachista HOM05D004454 ORTHO05D005462 1.0e-35 154.5 99 79.8
arahy.Tifrunner.gnm1.ann1.AQXS59 Arachis hypogaea HOM05D004454 ORTHO05D005462 1.3e-35 154.1 99 79.8
Lalb_Chr19g0133161 Lupinus albus HOM05D004454 ORTHO05D005462 1.3e-35 154.1 99 79.8
Ah.11g046280 Amaranthus hybridus HOM05D004454 ORTHO05D005462 2.2e-35 153.3 117 69.2
Ca_00529_v3 Cicer arietinum L. HOM05D004454 ORTHO05D005462 2.9e-35 152.9 99 79.8
Cc04_g15930 Coffea canephora HOM05D004454 ORTHO05D005462 2.9e-35 152.9 106 73.6
FAN08G3623 Fragaria x ananassa HOM05D004454 ORTHO05D005462 3.8e-35 152.5 99 79.8
TAR374G1062 Trochodendron aralioides HOM05D004454 ORTHO05D005462 3.8e-35 152.5 99 80.8
COL.COLO4_21447 Corchorus olitorius HOM05D000359 ORTHO05D000251 5.0e-35 152.1 115 73.9
FvH4_5g16310 Fragaria vesca HOM05D004454 ORTHO05D005462 5.0e-35 152.1 99 78.8
FAN04G1717 Fragaria x ananassa HOM05D004454 ORTHO05D005462 5.0e-35 152.1 99 78.8
FAN13G0079 Fragaria x ananassa HOM05D004454 ORTHO05D005462 5.0e-35 152.1 99 78.8
FAN18G3350 Fragaria x ananassa HOM05D004454 ORTHO05D005462 5.0e-35 152.1 99 78.8
Sc04g0002160 Simmondsia chinensis HOM05D004454 ORTHO05D005462 6.5e-35 151.8 99 77.8
Lalb_Chr03g0031901 Lupinus albus HOM05D004454 ORTHO05D005462 8.5e-35 151.4 99 77.8
Lsat_1_v5_gn_5_17960 Lactuca sativa HOM05D004454 ORTHO05D005462 1.1e-34 151.0 97 80.4
Psat4g146120 Pisum sativum HOM05D004454 ORTHO05D005462 1.1e-34 151.0 99 78.8
VMungo1215G3435 Vigna mungo HOM05D004454 ORTHO05D005462 1.5e-34 150.6 99 77.8
RcHm_v2.0_Chr7g0179821 Rosa chinensis HOM05D004454 ORTHO05D005462 3.2e-34 149.4 99 76.8
Glyma.11G026400 Glycine max HOM05D004454 ORTHO05D005462 4.2e-34 149.1 99 76.8
Ca_26268_v3 Cicer arietinum L. HOM05D004454 ORTHO05D005462 5.5e-34 148.7 99 75.8
Phvul.002G154200 Phaseolus vulgaris HOM05D004454 ORTHO05D005462 7.2e-34 148.3 99 75.8
vmacro16584 Vaccinium macrocarpon HOM05D004454 ORTHO05D005462 7.2e-34 148.3 126 69.0
MSTRG.9661 Avicennia marina HOM05D004454 ORTHO05D005462 1.2e-33 147.5 105 75.2
TPR.G25821 Trifolium pratense HOM05D004454 ORTHO05D005462 1.2e-33 147.5 99 76.8
BcaC09g49851 Brassica carinata HOM05D004454 ORTHO05D005462 2.7e-33 146.4 101 72.3
HanXRQChr14g0438801 Helianthus annuus HOM05D004454 ORTHO05D005462 2.7e-33 146.4 97 76.3
SHI46877 Sapria himalayana HOM05D004454 ORTHO05D005462 8.0e-33 144.8 117 70.1
Migut.I00064 Erythranthe guttata HOM05D004454 ORTHO05D005462 1.8e-32 143.7 105 71.4
QL02p081076 Quercus lobata HOM05D004454 ORTHO05D005462 1.8e-32 143.7 142 60.6
QL10p027831 Quercus lobata HOM05D004454 ORTHO05D005462 1.8e-32 143.7 142 60.6
Medtr8g021140 Medicago truncatula HOM05D004454 ORTHO05D005462 2.3e-32 143.3 101 76.2
AL5G27480 Arabidopsis lyrata HOM05D004454 ORTHO05D005462 3.0e-32 142.9 100 74.0
Carub.0005s1425 Capsella rubella HOM05D004454 ORTHO05D005462 3.0e-32 142.9 100 73.0
Sp5g13890 Schrenkiella parvula HOM05D004454 ORTHO05D005462 3.0e-32 142.9 100 73.0
Glyma.12G016100 Glycine max HOM05D004454 ORTHO05D005462 4.0e-32 142.5 99 73.7
MBI01_g33693_MAGBIO Magnolia biondii HOM05D004454 ORTHO05D005462 4.0e-32 142.5 93 77.4
Sed0026284 Sechium edule HOM05D004454 ORTHO05D005462 4.0e-32 142.5 99 75.8
BolC1t03163H Brassica oleracea HOM05D004454 ORTHO05D005462 6.8e-32 141.7 101 70.3
MBI04_g34104_MAGBIO Magnolia biondii HOM05D004454 ORTHO05D005462 6.8e-32 141.7 93 76.3
Oeu016330.1 Olea europaea HOM05D004454 ORTHO05D005462 6.8e-32 141.7 105 72.4
MELO3C002234.2 Cucumis melo HOM05D004454 ORTHO05D005462 1.2e-31 141.0 99 73.7
BcaB05g22913 Brassica carinata HOM05D004454 ORTHO05D005462 1.5e-31 140.6 101 70.3
PSO832G1188 Papaver somniferum HOM05D004454 ORTHO05D005462 1.5e-31 140.6 102 72.5
A01p25460 Brassica napus HOM05D004454 ORTHO05D005462 2.0e-31 140.2 99 69.7
BraA01t02468Z Brassica rapa HOM05D004454 ORTHO05D005462 2.0e-31 140.2 99 69.7
CsaV3_1G008170 Cucumis sativus L. HOM05D004454 ORTHO05D005462 2.0e-31 140.2 99 73.7
ECA246G3380 Erigeron canadensis HOM05D004454 ORTHO05D005462 2.6e-31 139.8 102 72.5
SalBow5G4570 Salvia bowleyana HOM05D004454 ORTHO05D005462 2.6e-31 139.8 105 71.4
PSO013G0161 Papaver somniferum HOM05D004454 ORTHO05D005462 3.4e-31 139.4 102 71.6
C01p31930 Brassica napus HOM05D004454 ORTHO05D005462 4.4e-31 139.0 101 69.3
AT3G48150 Arabidopsis thaliana HOM05D004454 ORTHO05D005462 7.5e-31 138.3 100 71.0
HanXRQChr05g0155441 Helianthus annuus HOM05D004454 ORTHO05D005462 7.5e-31 138.3 118 68.6
Thhalv10010239m.g Eutrema salsugineum HOM05D004454 ORTHO05D005462 9.8e-31 137.9 100 71.0
ClCG01G014140 Citrullus lanatus HOM05D004454 ORTHO05D005462 1.3e-30 137.5 99 72.7
AUR62031054 Chenopodium quinoa HOM05D004454 ORTHO05D005462 2.8e-30 136.3 99 73.7
Aqoxy3G03142 Aquilegia oxysepala HOM05D004454 ORTHO05D005462 4.8e-30 135.6 99 70.7
Medtr1g103750 Medicago truncatula HOM05D004454 ORTHO05D005462 6.3e-30 135.2 96 75.0
SGA_v2.0_scaffold467G52036 Striga asiatica HOM05D004454 ORTHO05D005462 8.3e-30 134.8 122 63.9
C08p23030 Brassica napus HOM05D004454 ORTHO05D005462 1.1e-29 134.4 100 69.0
BolC8t49941H Brassica oleracea HOM05D004454 ORTHO05D005462 1.1e-29 134.4 100 69.0
A06p19550 Brassica napus HOM05D004454 ORTHO05D005462 1.4e-29 134.0 100 69.0
BraA06t25035Z Brassica rapa HOM05D004454 ORTHO05D005462 1.4e-29 134.0 100 69.0
Peaxi162Scf00017g02211 Petunia axillaris HOM05D004454 ORTHO05D005462 2.4e-29 133.3 115 64.3
BcaC07g39296 Brassica carinata HOM05D004454 ORTHO05D005462 3.1e-29 132.9 100 68.0
Aa31LG4G16750 Aethionema arabicum HOM05D004454 ORTHO05D005462 9.1e-29 131.3 100 68.0
EL10Ac5g10847 Beta vulgaris HOM05D004454 ORTHO05D005462 1.2e-28 131.0 168 48.2
BcaB01g00842 Brassica carinata HOM05D004454 ORTHO05D005462 1.2e-28 131.0 100 69.0
Ciclev10004829m.g Citrus clementina HOM05D004454 ORTHO05D005462 3.5e-28 129.4 67 89.6
Os02g0656300 Oryza sativa ssp. japonica HOM05D004454 ORTHO05D005462 1.3e-27 127.5 100 69.0
ATR0057G034 Amborella trichopoda HOM05D004454 ORTHO05D005462 2.2e-27 126.7 115 61.7
HPP92_012132 Vanilla planifolia HOM05D004454 ORTHO05D005462 3.8e-27 125.9 105 61.9
MD13G1029000 Malus domestica HOM05D004454 ORTHO05D005462 2.5e-26 123.2 67 86.6
Phvul.007G021500 Phaseolus vulgaris HOM05D004454 ORTHO05D005462 1.6e-25 120.6 67 80.6
Zm00001eb249420 Zea mays HOM05D004454 ORTHO05D005462 8.0e-25 118.2 120 58.3
Atru.chr9.2395 Acer truncatum HOM05D004454 ORTHO05D005462 1.2e-23 114.4 99 68.7
Glyma.01G216550 Glycine max HOM05D004454 ORTHO05D005462 4.4e-23 112.5 80 72.5
THA.LOC104799671 Tarenaya hassleriana HOM05D004454 ORTHO05D005462 4.4e-23 112.5 82 70.7
unitig_0.g2210 Utricularia gibba HOM05D004454 ORTHO05D005462 7.5e-23 111.7 116 56.0
DCAR_031479 Daucus carota HOM05D004454 ORTHO05D005462 1.7e-22 110.5 159 44.0
CDE04G0088 Ceratophyllum demersum HOM05D004454 ORTHO05D005462 4.9e-22 109.0 96 59.4
AagrBONN_evm.TU.Sc2ySwM_368.1566 Anthoceros agrestis HOM05D004454 ORTHO05D005462 2.9e-19 99.8 69 71.0
Nitab4.5_0000026g0380 Nicotiana tabacum HOM05D004454 ORTHO05D005462 2.5e-18 96.7 107 56.1
SEGI_02939 Sequoiadendron giganteum HOM05D004454 ORTHO05D005462 3.3e-18 96.3 83 61.4
CBR_g45228 Chara braunii HOM05D004454 ORTHO05D005462 1.4e-16 90.9 60 70.0
Mapoly0091s0003 Marchantia polymorpha HOM05D004454 ORTHO05D005462 2.3e-16 90.1 55 76.4
Nitab4.5_0003577g0020 Nicotiana tabacum HOM05D004454 ORTHO05D005462 4.0e-16 89.4 107 55.1
COL.COLO4_19780 Corchorus olitorius HOM05D004454 ORTHO05D005462 5.2e-16 89.0 83 63.9
Pp3c11_17870 Physcomitrium patens HOM05D004454 ORTHO05D005462 5.7e-15 85.5 93 50.5
MBI01_g40849_MAGBIO Magnolia biondii HOM05D000031 ORTHO05D000030 3.7e-14 82.8 103 45.6
SMO147G0289 Selaginella moellendorffii HOM05D004454 ORTHO05D005462 3.2e-13 79.7 47 78.7
Cre16.g681578 Chlamydomonas reinhardtii HOM05D004454 ORTHO05D005462 3.5e-12 76.3 57 64.9
MD17G1271900 Malus domestica HOM05D004454 ORTHO05D005462 1.9e-10 70.5 37 83.8
MCO11G723 Micromonas commoda HOM05D004454 ORTHO05D005462 1.2e-09 67.8 54 59.3


User provided reference genes

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