Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13114 Davidia involucrata HOM05D000851 ORTHO05D003960 1.2e-106 389.8 195 100.0
Dinv07985 Davidia involucrata HOM05D000851 ORTHO05D003960 2.3e-68 262.7 240 62.1
Hma1.2p1_0002F.1_g003030 Hydrangea macrophylla HOM05D000851 ORTHO05D003960 1.2e-64 250.4 250 56.8
Cc04_g16060 Coffea canephora HOM05D000851 ORTHO05D003960 5.4e-54 214.9 241 52.3
Rhsim08G0163300 Rhododendron simsii HOM05D000851 ORTHO05D003960 5.6e-51 204.9 243 50.2
Actinidia37680 Actinidia chinensis HOM05D000851 ORTHO05D003960 8.9e-49 197.6 251 49.8
Lj5C118T20 Lonicera japonica HOM05D000851 ORTHO05D003960 2.0e-48 196.4 241 48.1
Actinidia04944 Actinidia chinensis HOM05D000851 ORTHO05D003960 2.6e-48 196.1 252 49.2
CSS0021301 Camellia sinensis var. sinensis HOM05D000851 ORTHO05D003960 9.9e-48 194.1 248 50.4
Cfa019035 Carpinus fangiana HOM05D000851 ORTHO05D003960 2.4e-46 189.5 246 49.6
Lj9A456T32 Lonicera japonica HOM05D000851 ORTHO05D003960 2.1e-45 186.4 236 50.4
Haze_07412 Corylus avellana HOM05D000851 ORTHO05D003960 1.3e-44 183.7 248 49.2
TAR629G1109 Trochodendron aralioides HOM05D000851 ORTHO05D003960 2.3e-44 183.0 253 45.8
Nitab4.5_0008162g0010 Nicotiana tabacum HOM05D000851 ORTHO05D003960 8.6e-44 181.0 245 47.8
MD14G1189800 Malus domestica HOM05D000851 ORTHO05D003960 7.3e-43 177.9 251 46.6
Nitab4.5_0000026g0290 Nicotiana tabacum HOM05D000851 ORTHO05D003960 9.5e-43 177.6 246 46.7
RcHm_v2.0_Chr7g0180061 Rosa chinensis HOM05D000851 ORTHO05D003960 9.5e-43 177.6 248 46.4
FAN08G1814 Fragaria x ananassa HOM05D000851 ORTHO05D003960 3.6e-42 175.6 248 45.2
FvH4_5g16010 Fragaria vesca HOM05D000851 ORTHO05D003960 4.7e-42 175.3 248 45.2
CANSAT80G1717 Cannabis sativa HOM05D000851 ORTHO05D003960 8.1e-42 174.5 241 47.3
FAN18G3653 Fragaria x ananassa HOM05D000851 ORTHO05D003960 1.1e-41 174.1 248 44.8
CSS0018554 Camellia sinensis var. sinensis HOM05D000851 ORTHO05D003960 1.4e-41 173.7 240 46.7
CSS0018646 Camellia sinensis var. sinensis HOM05D000851 ORTHO05D003960 1.4e-41 173.7 240 46.7
Peaxi162Scf00496g00111 Petunia axillaris HOM05D000851 ORTHO05D003960 3.1e-41 172.6 246 45.5
TWI60G1684 Tripterygium wilfordii HOM05D000851 ORTHO05D003960 6.8e-41 171.4 240 48.8
FAN13G2492 Fragaria x ananassa HOM05D000851 ORTHO05D003960 8.9e-41 171.0 248 44.4
FAN04G0328 Fragaria x ananassa HOM05D000851 ORTHO05D003960 1.2e-40 170.6 248 44.8
Prupe.5G182400 Prunus persica HOM05D000851 ORTHO05D003960 1.2e-40 170.6 252 45.2
Cpa.g.sc203.10 Carica papaya HOM05D000851 ORTHO05D003960 1.5e-40 170.2 243 44.4
Potri.012G073400 Populus trichocarpa HOM05D000851 ORTHO05D003960 2.6e-40 169.5 246 45.9
MD06G1183700 Malus domestica HOM05D000851 ORTHO05D003960 1.3e-39 167.2 252 45.6
CAN.G999.4 Capsicum annuum HOM05D000851 ORTHO05D003960 4.9e-39 165.2 243 46.9
Ciclev10024191m.g Citrus clementina HOM05D000851 ORTHO05D003960 4.9e-39 165.2 250 44.8
Migut.I00072 Erythranthe guttata HOM05D000851 ORTHO05D003960 6.4e-39 164.9 243 44.4
Aqoxy3G03185 Aquilegia oxysepala HOM05D000851 ORTHO05D003960 8.4e-39 164.5 244 43.4
Manes.06G098700 Manihot esculenta HOM05D000851 ORTHO05D003960 1.1e-38 164.1 246 46.3
PGSC0003DMG400024464 Solanum tuberosum HOM05D000851 ORTHO05D003960 1.1e-38 164.1 243 44.4
MSTRG.11432 Avicennia marina HOM05D000851 ORTHO05D003960 1.4e-38 163.7 241 44.4
GSVIVG01008097001 Vitis vinifera HOM05D000851 ORTHO05D003960 1.9e-38 163.3 248 44.0
CiPaw.11G034600 Carya illinoinensis HOM05D000851 ORTHO05D003960 2.4e-38 162.9 238 45.4
TWI81G0147 Tripterygium wilfordii HOM05D000851 ORTHO05D003960 3.2e-38 162.5 240 47.1
Solyc03g113600.4 Solanum lycopersicum HOM05D000851 ORTHO05D003960 4.1e-38 162.2 243 44.4
Nitab4.5_0000642g0120 Nicotiana tabacum HOM05D000851 ORTHO05D003960 7.1e-38 161.4 245 45.7
Sabra12G0052200 Salix brachista HOM05D000851 ORTHO05D003960 1.0e-36 157.5 245 44.1
QL10p014057 Quercus lobata HOM05D000851 ORTHO05D003960 1.3e-36 157.1 247 42.1
Sopen03g032640 Solanum pennellii HOM05D000851 ORTHO05D003960 3.0e-36 156.0 244 43.9
Glyma.04G177100 Glycine max HOM05D000851 ORTHO05D003960 3.9e-36 155.6 248 43.5
ClCG01G014240 Citrullus lanatus HOM05D000851 ORTHO05D003960 8.6e-36 154.5 260 41.2
Peaxi162Scf00017g02121 Petunia axillaris HOM05D000851 ORTHO05D003960 8.6e-36 154.5 245 43.3
Glyma.06G187900 Glycine max HOM05D000851 ORTHO05D003960 1.5e-35 153.7 246 43.1
CsaV3_1G008080 Cucumis sativus L. HOM05D000851 ORTHO05D003960 3.3e-35 152.5 252 40.9
THA.LOC104809233 Tarenaya hassleriana HOM05D000851 ORTHO05D003960 3.3e-35 152.5 249 43.4
Duzib084G0864 Durio zibethinus HOM05D000851 ORTHO05D003960 5.6e-35 151.8 236 45.3
Thecc.K0001400 Theobroma cacao HOM05D000851 ORTHO05D003960 5.6e-35 151.8 234 47.0
Oeu039558.1 Olea europaea HOM05D000851 ORTHO05D003960 2.1e-34 149.8 240 44.2
VMungo1309G0691 Vigna mungo HOM05D000851 ORTHO05D003960 6.2e-34 148.3 245 42.4
Ca_04718_v3 Cicer arietinum L. HOM05D000851 ORTHO05D003960 8.1e-34 147.9 250 41.2
Lalb_Chr11g0070501 Lupinus albus HOM05D000851 ORTHO05D003960 8.1e-34 147.9 245 43.3
TPR.G11839 Trifolium pratense HOM05D000851 ORTHO05D003960 1.1e-33 147.5 255 40.8
Lalb_Chr08g0236091 Lupinus albus HOM05D000851 ORTHO05D003960 1.4e-33 147.1 242 42.1
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 4.0e-33 145.6 242 43.4
Duzib068G1195 Durio zibethinus HOM05D000851 ORTHO05D003960 5.2e-33 145.2 238 44.5
Medtr0168s0060 Medicago truncatula HOM05D000851 ORTHO05D003960 1.2e-32 144.1 246 41.5
Duzib205G0246 Durio zibethinus HOM05D000851 ORTHO05D003960 1.5e-32 143.7 238 44.5
vmacro19337 Vaccinium macrocarpon HOM05D000851 ORTHO05D003960 2.0e-32 143.3 223 44.8
Nitab4.5_0009486g0040 Nicotiana tabacum HOM05D000851 ORTHO05D003960 5.8e-32 141.7 245 41.2
Phvul.009G183400 Phaseolus vulgaris HOM05D000851 ORTHO05D003960 5.8e-32 141.7 245 42.4
Potri.015G068400 Populus trichocarpa HOM05D000851 ORTHO05D003960 5.8e-32 141.7 246 42.3
Manes.14G072200 Manihot esculenta HOM05D000851 ORTHO05D003960 7.6e-32 141.4 243 42.0
Psat5g187280 Pisum sativum HOM05D000851 ORTHO05D003960 4.9e-31 138.7 246 40.7
DCAR_026091 Daucus carota HOM05D000851 ORTHO05D003960 1.4e-30 137.1 238 38.2
Hma1.2p1_0572F.1_g181110 Hydrangea macrophylla HOM05D000851 ORTHO05D003960 4.6e-29 132.1 246 40.2
MELO3C002225.2 Cucumis melo HOM05D000851 ORTHO05D003960 1.0e-28 131.0 258 37.2
Atru.chr9.2367 Acer truncatum HOM05D000851 ORTHO05D003960 1.3e-28 130.6 120 58.3
CiPaw.12G022000 Carya illinoinensis HOM05D000851 ORTHO05D003960 1.3e-28 130.6 243 39.1
ECA246G4088 Erigeron canadensis HOM05D000851 ORTHO05D003960 5.1e-28 128.6 149 46.3
Nn4g22973 Nelumbo nucifera HOM05D000851 ORTHO05D003960 5.1e-28 128.6 250 36.0
Gohir.A12G174500 Gossypium hirsutum HOM05D000851 ORTHO05D003960 1.5e-27 127.1 218 40.8
SGA_v2.0_scaffold467G52046 Striga asiatica HOM05D000851 ORTHO05D003960 5.6e-27 125.2 193 39.9
Gorai.008G189600 Gossypium raimondii HOM05D000851 ORTHO05D003960 7.3e-27 124.8 217 40.6
Gohir.D12G177200 Gossypium hirsutum HOM05D000851 ORTHO05D003960 9.6e-27 124.4 217 40.6
Psat4g054640 Pisum sativum HOM05D000851 ORTHO05D003960 1.3e-26 124.0 238 37.4
Sed0009362 Sechium edule HOM05D000851 ORTHO05D003960 1.3e-26 124.0 216 40.3
PSO161G0049 Papaver somniferum HOM05D000851 ORTHO05D003960 2.1e-26 123.2 130 45.4
Sopen06g027500 Solanum pennellii HOM05D000851 ORTHO05D003960 2.1e-26 123.2 256 35.9
PSO478G0410 Papaver somniferum HOM05D000851 ORTHO05D003960 3.6e-26 122.5 130 46.2
PGSC0003DMG400033062 Solanum tuberosum HOM05D000851 ORTHO05D003960 4.8e-26 122.1 256 35.5
Sed0022345 Sechium edule HOM05D000851 ORTHO05D003960 8.1e-26 121.3 228 39.0
Medtr4g107310 Medicago truncatula HOM05D000851 ORTHO05D003960 1.4e-25 120.6 243 37.9
Carub.0002s2161 Capsella rubella HOM05D000851 ORTHO05D003960 3.1e-25 119.4 210 41.4
Ca_21868_v3 Cicer arietinum L. HOM05D000851 ORTHO05D003960 3.1e-25 119.4 239 36.4
Solyc12g027730.2 Solanum lycopersicum HOM05D000851 ORTHO05D003960 4.0e-25 119.0 216 41.7
A07p40470 Brassica napus HOM05D000851 ORTHO05D003960 6.9e-25 118.2 212 39.2
BolC6t39920H Brassica oleracea HOM05D000851 ORTHO05D003960 9.0e-25 117.9 207 39.1
Peaxi162Scf00689g00054 Petunia axillaris HOM05D000851 ORTHO05D003960 9.0e-25 117.9 255 36.9
Aa31LG7G3770 Aethionema arabicum HOM05D000851 ORTHO05D003960 1.2e-24 117.5 222 39.6
ECA232G1500 Erigeron canadensis HOM05D000851 ORTHO05D003960 1.2e-24 117.5 236 34.3
Sp5g29960 Schrenkiella parvula HOM05D000851 ORTHO05D003960 1.2e-24 117.5 214 38.8
AT1G74830 Arabidopsis thaliana HOM05D000851 ORTHO05D003960 1.5e-24 117.1 204 39.2
BcaC08g46914 Brassica carinata HOM05D000851 ORTHO05D003960 1.5e-24 117.1 211 39.3
C06p48840 Brassica napus HOM05D000851 ORTHO05D003960 1.5e-24 117.1 211 39.3
PGSC0003DMG400011830 Solanum tuberosum HOM05D000851 ORTHO05D003960 1.5e-24 117.1 212 43.4
AL2G34710 Arabidopsis lyrata HOM05D000851 ORTHO05D003960 2.6e-24 116.3 203 39.9
Migut.D01888 Erythranthe guttata HOM05D000851 ORTHO05D003960 2.6e-24 116.3 252 36.5
Lj4g0013415 Lotus japonicus HOM05D000851 ORTHO05D003960 3.4e-24 115.9 235 35.3
PSO591G0255 Papaver somniferum HOM05D000851 ORTHO05D003960 3.4e-24 115.9 254 38.6
PSO832G0402 Papaver somniferum HOM05D000851 ORTHO05D003960 4.5e-24 115.5 254 39.4
CAN.G628.57 Capsicum annuum HOM05D000851 ORTHO05D003960 5.8e-24 115.2 256 37.1
Thhalv10007355m.g Eutrema salsugineum HOM05D000851 ORTHO05D003960 5.8e-24 115.2 215 39.1
Lalb_Chr12g0201241 Lupinus albus HOM05D000851 ORTHO05D003960 5.8e-24 115.2 203 40.4
Sopen12g012800 Solanum pennellii HOM05D000851 ORTHO05D003960 5.8e-24 115.2 216 41.2
CARHR019610 Cardamine hirsuta HOM05D000851 ORTHO05D003960 7.6e-24 114.8 226 36.7
Carub.0001s1862 Capsella rubella HOM05D000851 ORTHO05D003960 1.3e-23 114.0 222 39.2
BraA07t31590Z Brassica rapa HOM05D000851 ORTHO05D003960 1.7e-23 113.6 213 39.0
Gohir.A11G028090 Gossypium hirsutum HOM05D000851 ORTHO05D003960 1.7e-23 113.6 233 37.8
Gorai.007G034200 Gossypium raimondii HOM05D000851 ORTHO05D003960 1.7e-23 113.6 233 37.8
Lsat_1_v5_gn_4_105980 Lactuca sativa HOM05D000851 ORTHO05D003960 1.7e-23 113.6 210 33.8
CARHR068140 Cardamine hirsuta HOM05D000851 ORTHO05D003960 3.8e-23 112.5 203 40.4
Thhalv10019533m.g Eutrema salsugineum HOM05D000851 ORTHO05D003960 3.8e-23 112.5 207 38.6
AT1G18990 Arabidopsis thaliana HOM05D000851 ORTHO05D003960 4.9e-23 112.1 221 38.0
BcaC05g25799 Brassica carinata HOM05D000851 ORTHO05D003960 4.9e-23 112.1 217 39.2
C05p17390 Brassica napus HOM05D000851 ORTHO05D003960 4.9e-23 112.1 217 39.2
BolC5t30439H Brassica oleracea HOM05D000851 ORTHO05D003960 4.9e-23 112.1 217 39.2
Sabra15G0093100 Salix brachista HOM05D000851 ORTHO05D003960 4.9e-23 112.1 223 39.5
Sp1g16950 Schrenkiella parvula HOM05D000851 ORTHO05D003960 4.9e-23 112.1 223 37.2
Sc12g0005900 Simmondsia chinensis HOM05D000851 ORTHO05D003960 6.4e-23 111.7 101 53.5
Gohir.D11G031300 Gossypium hirsutum HOM05D000851 ORTHO05D003960 8.4e-23 111.3 233 37.3
BcaC08g46905 Brassica carinata HOM05D000851 ORTHO05D003960 1.1e-22 110.9 211 38.9
BcaC08g46947 Brassica carinata HOM05D000851 ORTHO05D003960 1.9e-22 110.2 210 37.1
AL1G31550 Arabidopsis lyrata HOM05D000851 ORTHO05D003960 5.4e-22 108.6 221 37.1
A06p15200 Brassica napus HOM05D000851 ORTHO05D003960 5.4e-22 108.6 216 38.9
BraA06t24634Z Brassica rapa HOM05D000851 ORTHO05D003960 5.4e-22 108.6 216 38.9
HanXRQChr05g0155211 Helianthus annuus HOM05D000851 ORTHO05D003960 1.2e-21 107.5 252 32.9
TPR.G38367 Trifolium pratense HOM05D000851 ORTHO05D003960 1.2e-21 107.5 234 34.6
Hund09388 Selenicereus undatus HOM05D000851 ORTHO05D003960 2.1e-21 106.7 290 27.9
SalBow3G2533 Salvia bowleyana HOM05D000851 ORTHO05D003960 4.6e-21 105.5 258 31.4
EL10Ac5g10875 Beta vulgaris HOM05D000851 ORTHO05D003960 6.0e-21 105.1 129 45.0
Aa31LG4G5040 Aethionema arabicum HOM05D000851 ORTHO05D003960 1.8e-20 103.6 197 38.6
BcaB07g31921 Brassica carinata HOM05D000851 ORTHO05D003960 2.3e-20 103.2 216 39.8
HanXRQChr09g0271441 Helianthus annuus HOM05D000851 ORTHO05D003960 3.0e-20 102.8 204 35.3
BcaB03g14470 Brassica carinata HOM05D000851 ORTHO05D003960 8.7e-20 101.3 205 36.6
unitig_26.g9631 Utricularia gibba HOM05D000851 ORTHO05D003960 8.7e-20 101.3 244 34.4
BcaB05g24872 Brassica carinata HOM05D000851 ORTHO05D003960 1.1e-19 100.9 199 36.7
BcaC07g41279 Brassica carinata HOM05D000851 ORTHO05D003960 1.1e-19 100.9 204 36.3
Nitab4.5_0000003g0120 Nicotiana tabacum HOM05D000851 ORTHO05D003960 1.5e-19 100.5 233 35.2
C08p42860 Brassica napus HOM05D000851 ORTHO05D003960 2.5e-19 99.8 203 37.9
BolC8t51841H Brassica oleracea HOM05D000851 ORTHO05D003960 2.5e-19 99.8 203 37.9
DCAR_021550 Daucus carota HOM05D000851 ORTHO05D003960 3.3e-19 99.4 242 33.1
A09p59570 Brassica napus HOM05D000851 ORTHO05D003960 1.6e-18 97.1 203 37.9
BraA09t41334Z Brassica rapa HOM05D000851 ORTHO05D003960 1.6e-18 97.1 203 37.9
Lsat_1_v5_gn_5_17380 Lactuca sativa HOM05D000851 ORTHO05D003960 2.1e-18 96.7 259 33.2
ECA247G0097 Erigeron canadensis HOM05D000851 ORTHO05D003960 1.8e-17 93.6 131 41.2
Nitab4.5_0000758g0050 Nicotiana tabacum HOM05D000851 ORTHO05D003960 1.8e-17 93.6 129 45.0
BcaB02g06969 Brassica carinata HOM05D000851 ORTHO05D003960 2.4e-17 93.2 195 34.9
Ah.11g045590 Amaranthus hybridus HOM05D000851 ORTHO05D003960 9.0e-17 91.3 248 31.0
Lsat_1_v5_gn_1_11360 Lactuca sativa HOM05D000851 ORTHO05D003960 1.7e-15 87.0 149 39.6
AUR62021782 Chenopodium quinoa HOM05D000851 ORTHO05D003960 6.4e-15 85.1 143 37.8
AUR62021783 Chenopodium quinoa HOM05D000851 ORTHO05D003960 6.4e-15 85.1 143 37.8
HanXRQChr02g0045341 Helianthus annuus HOM05D000851 ORTHO05D003960 8.4e-15 84.7 129 38.8
BolC6t38425H Brassica oleracea HOM05D000851 ORTHO05D003960 1.1e-14 84.3 203 35.0
Hund02696 Selenicereus undatus HOM05D000851 ORTHO05D003960 1.9e-14 83.6 112 42.9
C06p33090 Brassica napus HOM05D000851 ORTHO05D003960 3.2e-14 82.8 201 35.8
HanXRQChr01g0030581 Helianthus annuus HOM05D000851 ORTHO05D003960 3.2e-14 82.8 129 38.0
HanXRQChr04g0118831 Helianthus annuus HOM05D000851 ORTHO05D003960 3.2e-14 82.8 129 38.0
AUR62008314 Chenopodium quinoa HOM05D000851 ORTHO05D003960 4.2e-14 82.4 70 60.0
BraA07t30559Z Brassica rapa HOM05D000851 ORTHO05D003960 3.0e-12 76.3 200 36.0
A07p29200 Brassica napus HOM05D000851 ORTHO05D003960 1.5e-11 73.9 198 34.3
arahy.Tifrunner.gnm1.ann1.272VPK Arachis hypogaea HOM05D000851 ORTHO05D003960 4.3e-11 72.4 292 27.4
arahy.Tifrunner.gnm1.ann1.NF83JW Arachis hypogaea HOM05D000851 ORTHO05D003960 4.3e-11 72.4 293 26.3
HanXRQChr03g0068611 Helianthus annuus HOM05D000851 ORTHO05D003960 4.8e-10 68.9 82 45.1
BcaB08g35890 Brassica carinata HOM05D000851 ORTHO05D003960 5.8e-08 62.0 179 29.6
Hma1.2p1_1045F.1_g251420 Hydrangea macrophylla HOM05D000851 ORTHO05D003960 1.0e-07 61.2 88 43.2
Sc04g0002260 Simmondsia chinensis HOM05D000851 ORTHO05D003960 2.2e-07 60.1 130 29.2


User provided reference genes

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