Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13101 Davidia involucrata HOM05D003139 ORTHO05D003540 3.0e-79 298.5 158 100.0
CSS0031410 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 5.4e-20 101.7 78 71.8
Hma1.2p1_0820F.1_g223870 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 7.0e-20 101.3 77 71.4
Dinv21200 Davidia involucrata HOM05D003139 ORTHO05D003540 3.0e-18 95.9 81 72.8
Ca_08987_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 1.9e-17 93.2 80 67.5
Oeu025672.1 Olea europaea HOM05D003139 ORTHO05D003540 3.3e-17 92.4 141 46.1
Actinidia05423 Actinidia chinensis HOM05D003139 ORTHO05D003540 1.6e-16 90.1 79 65.8
MSTRG.10370 Avicennia marina HOM05D003139 ORTHO05D003540 1.6e-16 90.1 77 59.7
Oeu056878.1 Olea europaea HOM05D003139 ORTHO05D003540 1.6e-16 90.1 80 66.2
Migut.L01785 Erythranthe guttata HOM05D003139 ORTHO05D003540 2.1e-16 89.7 82 65.9
Phvul.001G190700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 2.1e-16 89.7 83 71.1
VMungo0720G0359 Vigna mungo HOM05D003139 ORTHO05D003540 2.1e-16 89.7 78 65.4
Oeu017682.1 Olea europaea HOM05D003139 ORTHO05D003540 2.8e-16 89.4 81 61.7
Atru.chr8.1495 Acer truncatum HOM05D003139 ORTHO05D003540 4.7e-16 88.6 77 63.6
FAN05G0400 Fragaria x ananassa HOM05D003139 ORTHO05D003540 6.2e-16 88.2 79 65.8
FAN05G1773 Fragaria x ananassa HOM05D003139 ORTHO05D003540 6.2e-16 88.2 79 65.8
FvH4_6g18850 Fragaria vesca HOM05D003139 ORTHO05D003540 1.1e-15 87.4 79 65.8
MELO3C024549.2 Cucumis melo HOM05D003139 ORTHO05D003540 1.8e-15 86.7 82 63.4
FAN02G0223 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.8e-15 86.7 79 65.8
Glyma.10G073600 Glycine max HOM05D003139 ORTHO05D003540 2.3e-15 86.3 105 57.1
Oeu047203.1 Olea europaea HOM05D003139 ORTHO05D003540 4.0e-15 85.5 82 62.2
FAN14G1758 Fragaria x ananassa HOM05D003139 ORTHO05D003540 5.2e-15 85.1 79 64.6
Ca_00900_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 8.9e-15 84.3 80 58.8
CsaV3_6G040710 Cucumis sativus L. HOM05D003139 ORTHO05D003540 8.9e-15 84.3 82 63.4
FAN09G1837 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.2e-14 84.0 79 63.3
Sed0002377 Sechium edule HOM05D003139 ORTHO05D003540 1.2e-14 84.0 82 62.2
PGR142G1499 Punica granatum HOM05D003139 ORTHO05D003540 1.5e-14 83.6 82 59.8
Psat6g080520 Pisum sativum HOM05D003139 ORTHO05D003540 2.0e-14 83.2 79 60.8
Glyma.13G154300 Glycine max HOM05D003139 ORTHO05D003540 3.4e-14 82.4 81 63.0
MD14G1023600 Malus domestica HOM05D003139 ORTHO05D003540 3.4e-14 82.4 78 62.8
Glyma.19G194957 Glycine max HOM05D003139 ORTHO05D003540 4.4e-14 82.0 83 66.3
Lsat_1_v5_gn_5_164981 Lactuca sativa HOM05D003139 ORTHO05D003540 4.4e-14 82.0 82 56.1
Glyma.03G196500 Glycine max HOM05D003139 ORTHO05D003540 7.5e-14 81.3 83 66.3
Psat3g032560 Pisum sativum HOM05D003139 ORTHO05D003540 7.5e-14 81.3 138 46.4
Oeu047862.1 Olea europaea HOM05D003139 ORTHO05D003540 9.8e-14 80.9 77 59.7
CANSAT64G2974 Cannabis sativa HOM05D003139 ORTHO05D003540 2.2e-13 79.7 82 61.0
CSS0009772 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 2.9e-13 79.3 82 62.2
TPR.G9897 Trifolium pratense HOM05D003139 ORTHO05D003540 2.9e-13 79.3 81 60.5
ClCG04G010080 Citrullus lanatus HOM05D003139 ORTHO05D003540 3.7e-13 79.0 82 61.0
Phvul.007G152700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 3.7e-13 79.0 78 61.5
CiPaw.10G010300 Carya illinoinensis HOM05D003139 ORTHO05D003540 4.9e-13 78.6 81 60.5
TWI53G0306 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 1.4e-12 77.0 81 59.3
ECA247G2190 Erigeron canadensis HOM05D003139 ORTHO05D003540 1.9e-12 76.6 88 58.0
Nitab4.5_0000692g0050 Nicotiana tabacum HOM05D003139 ORTHO05D003540 2.4e-12 76.3 78 62.8
Actinidia31269 Actinidia chinensis HOM05D003139 ORTHO05D003540 3.2e-12 75.9 79 62.0
Lalb_Chr25g0288311 Lupinus albus HOM05D003139 ORTHO05D003540 3.2e-12 75.9 86 58.1
ClCG10G018920 Citrullus lanatus HOM05D003139 ORTHO05D003540 4.1e-12 75.5 80 57.5
Sc20g0006320 Simmondsia chinensis HOM05D003139 ORTHO05D003540 5.4e-12 75.1 81 55.6
Lalb_Chr02g0154921 Lupinus albus HOM05D003139 ORTHO05D003540 7.1e-12 74.7 79 58.2
Cpa.g.sc5.12 Carica papaya HOM05D003139 ORTHO05D003540 9.2e-12 74.3 82 58.5
Duzib093G1338 Durio zibethinus HOM05D003139 ORTHO05D003540 9.2e-12 74.3 80 65.0
TAR369G0615 Trochodendron aralioides HOM05D003139 ORTHO05D003540 1.2e-11 73.9 84 61.9
MELO3C009477.2 Cucumis melo HOM05D003139 ORTHO05D003540 2.1e-11 73.2 80 58.8
Potri.006G212800 Populus trichocarpa HOM05D003139 ORTHO05D003540 2.1e-11 73.2 82 59.8
Migut.J01028 Erythranthe guttata HOM05D003139 ORTHO05D003540 2.7e-11 72.8 79 64.6
Sed0022451 Sechium edule HOM05D003139 ORTHO05D003540 2.7e-11 72.8 80 55.0
Solyc09g009840.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 3.5e-11 72.4 76 57.9
HanXRQChr01g0010381 Helianthus annuus HOM05D003139 ORTHO05D003540 4.6e-11 72.0 77 53.2
Sabra06G0163800 Salix brachista HOM05D003139 ORTHO05D003540 4.6e-11 72.0 80 60.0
Sopen09g004600 Solanum pennellii HOM05D003139 ORTHO05D003540 4.6e-11 72.0 76 57.9
CiPaw.09G014800 Carya illinoinensis HOM05D003139 ORTHO05D003540 6.0e-11 71.6 82 61.0
Cc06_g05890 Coffea canephora HOM05D003139 ORTHO05D003540 6.0e-11 71.6 80 53.8
Haze_19619 Corylus avellana HOM05D003139 ORTHO05D003540 6.0e-11 71.6 85 60.0
Cfa016615 Carpinus fangiana HOM05D003139 ORTHO05D003540 7.8e-11 71.2 85 61.2
CsaV3_3G037330 Cucumis sativus L. HOM05D003139 ORTHO05D003540 7.8e-11 71.2 80 58.8
Aqoxy4G02769 Aquilegia oxysepala HOM05D003139 ORTHO05D003540 1.0e-10 70.9 80 61.2
EL10Ac7g16909 Beta vulgaris HOM05D003139 ORTHO05D003540 1.0e-10 70.9 81 56.8
HanXRQChr04g0109331 Helianthus annuus HOM05D003139 ORTHO05D003540 1.0e-10 70.9 77 53.2
TPR.G23344 Trifolium pratense HOM05D003139 ORTHO05D003540 1.0e-10 70.9 138 41.3
Lsat_1_v5_gn_9_20601 Lactuca sativa HOM05D003139 ORTHO05D003540 1.3e-10 70.5 82 58.5
Medtr1g059890 Medicago truncatula HOM05D003139 ORTHO05D003540 1.3e-10 70.5 82 57.3
Lj5g0002620 Lotus japonicus HOM05D003139 ORTHO05D003540 2.3e-10 69.7 81 55.6
Prupe.7G109200 Prunus persica HOM05D003139 ORTHO05D003540 3.0e-10 69.3 81 61.7
HanXRQChr08g0229891 Helianthus annuus HOM05D003139 ORTHO05D003540 3.9e-10 68.9 82 52.4
AUR62006190 Chenopodium quinoa HOM05D003139 ORTHO05D003540 5.1e-10 68.6 81 53.1
TWI74G1218 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 5.1e-10 68.6 81 58.0
SGA_v2.0_scaffold13G06709 Striga asiatica HOM05D003139 ORTHO05D003540 6.6e-10 68.2 149 39.6
AUR62028515 Chenopodium quinoa HOM05D003139 ORTHO05D003540 8.6e-10 67.8 81 51.9
Potri.016G079500 Populus trichocarpa HOM05D003139 ORTHO05D003540 8.6e-10 67.8 84 54.8
MD12G1024700 Malus domestica HOM05D003139 ORTHO05D003540 1.1e-09 67.4 82 59.8
Duzib106G1991 Durio zibethinus HOM05D003139 ORTHO05D003540 1.5e-09 67.0 81 60.5
Gohir.D04G099100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 1.9e-09 66.6 80 60.0
Gorai.009G401500 Gossypium raimondii HOM05D003139 ORTHO05D003540 1.9e-09 66.6 80 60.0
HanXRQChr04g0109341 Helianthus annuus HOM05D003139 ORTHO05D003540 1.9e-09 66.6 78 53.8
Lalb_Chr20g0111681 Lupinus albus HOM05D003139 ORTHO05D003540 1.9e-09 66.6 78 52.6
SGA_v2.0_scaffold184G39967 Striga asiatica HOM05D003139 ORTHO05D003540 1.9e-09 66.6 75 52.0
Sabra16G0085400 Salix brachista HOM05D003139 ORTHO05D003540 2.5e-09 66.2 85 55.3
Sabra16G0087500 Salix brachista HOM05D003139 ORTHO05D003540 2.5e-09 66.2 85 55.3
Dinv31692 Davidia involucrata HOM05D003139 ORTHO05D003540 5.6e-09 65.1 71 63.4
Gohir.A04G062300 Gossypium hirsutum HOM05D003139 ORTHO05D003540 7.3e-09 64.7 80 58.8
Medtr7g104725 Medicago truncatula HOM05D003139 ORTHO05D003540 7.3e-09 64.7 83 54.2
Manes.08G025900 Manihot esculenta HOM05D003139 ORTHO05D003540 9.5e-09 64.3 80 56.2
SalBow5G1418 Salvia bowleyana HOM05D003139 ORTHO05D003540 9.5e-09 64.3 79 48.1
Lsat_1_v5_gn_8_77361 Lactuca sativa HOM05D003139 ORTHO05D003540 1.2e-08 63.9 83 55.4
PGSC0003DMG400008878 Solanum tuberosum HOM05D003139 ORTHO05D003540 1.6e-08 63.5 76 55.3
DCAR_020744 Daucus carota HOM05D003139 ORTHO05D003540 2.1e-08 63.2 82 57.3
DCAR_013395 Daucus carota HOM05D003139 ORTHO05D003540 3.6e-08 62.4 145 35.2
Sed0010191 Sechium edule HOM05D003139 ORTHO05D003540 3.6e-08 62.4 80 53.8
Ah.15g090850 Amaranthus hybridus HOM05D003139 ORTHO05D003540 6.2e-08 61.6 79 48.1
Gohir.A09G139500 Gossypium hirsutum HOM05D003139 ORTHO05D003540 8.1e-08 61.2 81 54.3
VMungo1383G1679 Vigna mungo HOM05D003139 ORTHO05D003540 1.4e-07 60.5 85 57.6
Gohir.A01G206000 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.3e-07 59.7 80 56.2
Gohir.D01G195400 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.3e-07 59.7 80 56.2
Gorai.002G239600 Gossypium raimondii HOM05D003139 ORTHO05D003540 2.3e-07 59.7 80 56.2
Peaxi162Scf00404g00061 Petunia axillaris HOM05D003139 ORTHO05D003540 2.3e-07 59.7 82 53.7
Rhsim04G0132000 Rhododendron simsii HOM05D003139 ORTHO05D003540 2.3e-07 59.7 78 52.6
Thecc.05G090100 Theobroma cacao HOM05D003139 ORTHO05D003540 2.3e-07 59.7 81 60.5
COL.COLO4_29723 Corchorus olitorius HOM05D003139 ORTHO05D003540 3.1e-07 59.3 81 60.5
PGSC0003DMG400028163 Solanum tuberosum HOM05D003139 ORTHO05D003540 3.1e-07 59.3 81 51.9
TAR633G0951 Trochodendron aralioides HOM05D003139 ORTHO05D003540 3.1e-07 59.3 82 54.9
Nn6g34887 Nelumbo nucifera HOM05D003139 ORTHO05D003540 4.0e-07 58.9 81 50.6
Solyc10g083330.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 5.2e-07 58.5 81 50.6
Sopen10g032810 Solanum pennellii HOM05D003139 ORTHO05D003540 5.2e-07 58.5 81 50.6
ECA248G2961 Erigeron canadensis HOM05D003139 ORTHO05D003540 1.2e-06 57.4 77 48.1
Gohir.D09G135100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 1.2e-06 57.4 81 54.3
Gorai.006G155000 Gossypium raimondii HOM05D003139 ORTHO05D003540 1.2e-06 57.4 81 54.3
QL07p038927 Quercus lobata HOM05D003139 ORTHO05D003540 1.5e-06 57.0 84 52.4
Dinv11834 Davidia involucrata HOM05D003139 ORTHO05D003540 3.4e-06 55.8 80 51.2
Eucgr.K02030 Eucalyptus grandis HOM05D003139 ORTHO05D003540 3.4e-06 55.8 66 54.5
Manes.09G054800 Manihot esculenta HOM05D003139 ORTHO05D003540 5.8e-06 55.1 80 56.2
DCAR_009168 Daucus carota HOM05D003139 ORTHO05D003540 9.9e-06 54.3 77 51.9
SGA_v2.0_scaffold35G14064 Striga asiatica HOM05D003139 ORTHO05D003540 9.9e-06 54.3 74 44.6


User provided reference genes

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