Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 2.0e-222 775.4 383 100.0
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 1.7e-173 612.8 358 87.2
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 4.0e-170 601.7 392 76.8
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 2.4e-162 575.9 393 75.8
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 2.2e-160 569.3 361 80.1
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 2.9e-160 568.9 369 77.0
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 8.7e-157 557.4 370 75.9
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 6.2e-155 551.2 370 75.7
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 1.4e-154 550.1 385 73.0
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 4.0e-154 548.5 389 73.0
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 6.9e-154 547.7 392 71.9
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 6.5e-152 541.2 370 74.6
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 1.9e-151 539.7 393 72.0
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 1.6e-150 536.6 390 72.1
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 4.6e-150 535.0 394 70.1
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 1.0e-149 533.9 394 70.1
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 5.1e-149 531.6 393 71.5
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 6.7e-149 531.2 373 73.2
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 5.7e-148 528.1 372 73.1
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 5.7e-148 528.1 372 73.1
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 9.6e-148 527.3 423 66.4
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 9.6e-148 527.3 372 73.1
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 9.6e-148 527.3 395 69.1
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 1.6e-147 526.6 372 73.1
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 1.4e-146 523.5 357 73.4
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 2.4e-146 522.7 376 70.7
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 5.3e-146 521.5 362 73.5
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 6.9e-146 521.2 363 72.5
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 1.5e-145 520.0 389 69.4
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 2.0e-145 519.6 353 75.6
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 2.6e-145 519.2 365 72.9
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 5.8e-145 518.1 356 75.0
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 5.0e-144 515.0 393 68.7
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 1.4e-143 513.5 353 74.5
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 4.2e-143 511.9 372 71.2
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 1.2e-142 510.4 408 65.4
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.1e-142 509.6 354 74.0
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 3.5e-142 508.8 320 78.4
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 4.6e-142 508.4 353 73.7
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 6.1e-142 508.1 385 68.1
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 1.0e-141 507.3 371 69.5
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 1.8e-141 506.5 353 73.1
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 2.5e-140 502.7 368 69.0
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 2.5e-140 502.7 364 72.0
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 7.4e-140 501.1 380 68.7
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 1.4e-138 496.9 357 70.3
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 2.4e-138 496.1 333 74.8
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 7.7e-137 491.1 352 70.2
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 1.7e-136 490.0 364 71.7
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 1.4e-135 486.9 337 73.6
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 1.9e-135 486.5 394 65.7
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 9.4e-135 484.2 358 69.6
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 1.2e-134 483.8 327 73.4
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 1.0e-133 480.7 355 68.7
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 5.1e-133 478.4 366 65.6
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 1.1e-132 477.2 391 64.5
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 3.3e-132 475.7 383 64.8
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 4.3e-132 475.3 392 63.5
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 4.8e-131 471.9 345 68.7
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 2.4e-130 469.5 393 63.1
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 2.4e-130 469.5 341 70.1
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 6.9e-130 468.0 325 72.0
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 4.5e-129 465.3 365 66.8
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 1.7e-128 463.4 350 67.4
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 1.7e-128 463.4 391 62.7
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 2.9e-128 462.6 318 72.0
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 1.4e-127 460.3 347 67.1
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 1.9e-127 459.9 356 65.2
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 4.2e-127 458.8 353 68.0
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 4.2e-127 458.8 356 66.0
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 2.1e-126 456.4 416 61.1
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 7.9e-126 454.5 356 65.2
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 1.0e-125 454.1 323 69.7
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 1.8e-125 453.4 355 65.9
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 5.1e-125 451.8 364 64.8
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 1.1e-124 450.7 320 70.6
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 1.5e-124 450.3 348 66.4
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 1.5e-124 450.3 358 64.8
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 2.6e-124 449.5 384 61.2
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 3.3e-124 449.1 348 65.8
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 1.3e-123 447.2 321 72.9
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 1.7e-123 446.8 327 70.0
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 1.7e-123 446.8 374 63.1
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 2.8e-123 446.0 336 67.3
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 4.8e-123 445.3 344 66.6
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 6.3e-123 444.9 360 62.5
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 8.2e-123 444.5 352 65.3
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 8.2e-123 444.5 326 67.5
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 5.3e-122 441.8 342 65.8
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 7.0e-122 441.4 334 66.8
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 9.1e-122 441.0 326 68.4
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 1.2e-121 440.7 329 67.5
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 1.6e-121 440.3 352 65.1
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 4.5e-121 438.7 337 66.5
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 4.5e-121 438.7 337 66.5
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 3.8e-120 435.6 349 64.2
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 3.8e-120 435.6 342 65.5
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 3.8e-120 435.6 355 64.5
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 5.0e-120 435.3 377 60.7
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 8.5e-120 434.5 338 65.4
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 2.5e-119 433.0 339 66.4
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 4.0e-117 425.6 352 63.9
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-117 425.2 329 67.2
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 8.8e-117 424.5 292 70.9
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 4.4e-116 422.2 301 68.8
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 7.5e-116 421.4 318 65.1
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 2.2e-112 409.8 303 68.3
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 1.5e-111 407.1 273 78.0
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 1.7e-107 393.7 319 62.1
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 4.1e-106 389.0 350 58.3
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 1.2e-105 387.5 368 56.5
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 1.6e-105 387.1 336 61.0
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 1.9e-103 380.2 315 61.0
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 1.6e-102 377.1 337 57.3
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 1.1e-98 364.4 257 71.6
Lj3C845T19 Lonicera japonica HOM05D005261 ORTHO05D006180 6.6e-96 355.1 193 89.1
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 9.5e-95 351.3 294 63.3
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 9.5e-87 324.7 250 66.4
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 1.9e-79 300.4 341 47.2
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 4.3e-71 272.7 197 73.1
SHI20620 Sapria himalayana HOM05D005261 ORTHO05D006180 1.3e-64 251.1 261 54.4
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 4.3e-63 246.1 302 49.7
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 6.2e-62 242.3 293 49.8
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 8.1e-54 215.3 189 62.4
SHI43763 Sapria himalayana HOM05D005261 ORTHO05D006180 9.0e-53 211.8 150 70.7
SHI46120 Sapria himalayana HOM05D005261 ORTHO05D006180 1.7e-51 207.6 150 70.0
PRCOL_00005291 Prasinoderma coloniale HOM05D005261 ORTHO05D006180 6.4e-51 205.7 361 39.1
SHI53472 Sapria himalayana HOM05D005261 ORTHO05D006180 7.9e-49 198.7 174 61.5
SHI32317 Sapria himalayana HOM05D005261 ORTHO05D006180 5.6e-47 192.6 306 39.2
SHI52923 Sapria himalayana HOM05D005261 ORTHO05D006180 8.1e-46 188.7 174 59.8
Oeu017307.1 Olea europaea HOM05D005261 ORTHO05D006180 4.6e-41 172.9 139 66.9
SHI54958 Sapria himalayana HOM05D005261 ORTHO05D006180 1.0e-40 171.8 112 77.7
Cre04.g224002 Chlamydomonas reinhardtii HOM05D005261 ORTHO05D006180 6.2e-38 162.5 167 49.7
SHI49977 Sapria himalayana HOM05D005261 ORTHO05D006180 3.4e-36 156.8 170 50.6
SHI53189 Sapria himalayana HOM05D005261 ORTHO05D006180 3.4e-36 156.8 174 56.3
SHI49044 Sapria himalayana HOM05D005261 ORTHO05D006180 8.2e-30 135.6 127 58.3
MCO14G461 Micromonas commoda HOM05D005261 ORTHO05D006180 1.5e-28 131.3 356 30.3
Rhsim13G0124000 Rhododendron simsii HOM05D005261 ORTHO05D006180 2.9e-27 127.1 187 46.0
SHI51067 Sapria himalayana HOM05D005261 ORTHO05D006180 6.1e-25 119.4 139 50.4
PGSC0003DMG401027564 Solanum tuberosum HOM05D001663 ORTHO05D003186 6.7e-24 115.9 80 70.0
SHI52089 Sapria himalayana HOM05D005261 ORTHO05D006180 1.5e-23 114.8 140 49.3
Lj3A845G93 Lonicera japonica HOM05D005261 ORTHO05D006180 9.7e-23 112.1 66 80.3
SHI51747 Sapria himalayana HOM05D005261 ORTHO05D006180 2.2e-22 110.9 140 47.9
SHI41608 Sapria himalayana HOM05D005261 ORTHO05D006180 1.0e-19 102.1 150 44.7
SHI50342 Sapria himalayana HOM05D005261 ORTHO05D006180 5.5e-10 69.7 45 80.0
ClCG11G007990 Citrullus lanatus HOM05D005261 ORTHO05D006180 3.3e-07 60.5 31 80.6


User provided reference genes

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