Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv13014 Davidia involucrata HOM05D011494 ORTHO05D016144 1.7e-115 419.5 229 100.0
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.2e-17 92.0 147 36.7
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.8e-16 90.5 145 36.6
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.8e-16 90.5 145 36.6
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.2e-15 87.8 140 37.9
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.5e-15 87.4 145 36.6
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 2.6e-15 86.7 137 39.4
CSS0038207 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 4.2e-13 79.3 142 35.9
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.4e-13 79.0 146 36.3
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 1.6e-12 77.4 156 35.3
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.7e-12 76.6 162 32.7
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 3.5e-12 76.3 145 31.0
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 2.3e-11 73.6 151 29.8
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 3.9e-11 72.8 160 29.4
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 3.9e-11 72.8 141 33.3
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 5.1e-11 72.4 151 29.1
FvH4_4g16178 Fragaria vesca HOM05D000004 ORTHO05D000224 6.6e-11 72.0 146 32.9
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 6.6e-11 72.0 150 30.7
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 8.7e-11 71.6 150 30.7
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-10 70.9 169 29.6
QL02p050943 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-10 70.9 169 30.8
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.5e-10 70.9 147 31.3
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 2.5e-10 70.1 161 34.2
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.3e-10 69.3 170 30.0
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.3e-10 69.3 169 29.0
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.3e-10 69.3 144 36.8
FvH4_3g19661 Fragaria vesca HOM05D000004 ORTHO05D000224 4.3e-10 69.3 145 33.1
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.6e-10 68.9 169 29.6
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.3e-10 68.6 169 29.0
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.3e-10 68.6 169 29.0
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.3e-10 68.6 169 29.0
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.6e-10 68.2 169 28.4
CSS0018430 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.6e-10 68.2 147 35.4
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.6e-10 68.2 169 29.0
FvH4_7g02962 Fragaria vesca HOM05D000004 ORTHO05D000034 9.6e-10 68.2 143 32.9
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-09 67.8 170 30.0
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-09 67.8 170 29.4
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 1.6e-09 67.4 156 31.4
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 1.6e-09 67.4 156 31.4
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-09 67.4 169 29.0
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.6e-09 67.4 152 30.3
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.8e-09 66.6 169 28.4
FvH4_2g11454 Fragaria vesca HOM05D000004 ORTHO05D000034 2.8e-09 66.6 146 31.5
Sabra18G0007400 Salix brachista HOM05D011124 ORTHO05D000224 2.8e-09 66.6 167 31.7
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-09 66.2 169 28.4
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-09 66.2 155 30.3
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 4.8e-09 65.9 138 30.4
Sabra18G0122200 Salix brachista HOM05D011124 ORTHO05D000224 4.8e-09 65.9 167 29.3
Sabra15G0062900 Salix brachista HOM05D011124 ORTHO05D000224 6.2e-09 65.5 167 31.1
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.1e-09 65.1 167 29.3
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 8.1e-09 65.1 150 32.0
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.1e-09 65.1 150 29.3
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-08 64.7 168 29.2
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.1e-08 64.7 156 32.7
Oeu053343.1 Olea europaea HOM05D009054 ORTHO05D000034 1.1e-08 64.7 150 30.7
SHI39571 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-08 64.7 152 28.3
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 1.4e-08 64.3 142 31.7
Sabra15G0035900 Salix brachista HOM05D011124 ORTHO05D000224 1.4e-08 64.3 167 31.1
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-08 63.9 167 28.7
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.8e-08 63.9 156 32.7
Rhsim01G0081400 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.4e-08 63.5 120 38.3
Sabra15G0074700 Salix brachista HOM05D011124 ORTHO05D000224 2.4e-08 63.5 167 30.5
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 2.4e-08 63.5 157 29.3
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 4.0e-08 62.8 90 37.8
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.3e-08 62.4 156 30.1
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 5.3e-08 62.4 156 32.1
SHI25940 Sapria himalayana HOM05D000004 ORTHO05D000002 5.3e-08 62.4 234 26.1
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.9e-08 62.0 158 29.1
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-07 61.2 155 29.0
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-07 61.2 155 29.0
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-07 61.2 155 29.0
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-07 61.2 151 31.8
QL09p028348 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-07 61.2 172 29.1
THA.LOC104822554 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 1.2e-07 61.2 144 29.9
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-07 60.8 167 28.7
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 1.5e-07 60.8 150 28.7
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 1.5e-07 60.8 155 29.0
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.5e-07 60.8 149 30.2
Rhsim10G0127900 Rhododendron simsii HOM05D011308 ORTHO05D000034 1.5e-07 60.8 91 35.2
SHI38848 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-07 60.8 162 28.4
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 2.0e-07 60.5 153 28.8
QL05p006227 Quercus lobata HOM05D000004 ORTHO05D000002 2.0e-07 60.5 171 29.2
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-07 60.1 155 29.0
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.6e-07 60.1 153 30.7
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.6e-07 60.1 153 30.7
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 3.4e-07 59.7 225 27.6
QL93p2008_0037 Quercus lobata HOM05D000004 ORTHO05D000002 3.4e-07 59.7 73 37.0
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 4.4e-07 59.3 161 29.2
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 4.4e-07 59.3 68 42.6
FvH4_4g16282 Fragaria vesca HOM05D011494 ORTHO05D000034 4.4e-07 59.3 140 30.0
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 4.4e-07 59.3 139 28.1
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.8e-07 58.9 113 31.9
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 5.8e-07 58.9 139 28.1
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 7.6e-07 58.5 113 32.7
QL08p035596 Quercus lobata HOM05D000004 ORTHO05D000002 7.6e-07 58.5 176 26.7
CANSAT11G1607 Cannabis sativa HOM05D000004 ORTHO05D000034 9.9e-07 58.2 166 27.7
ClCG01G013890 Citrullus lanatus HOM05D023590 ORTHO05D000224 9.9e-07 58.2 157 28.7
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 9.9e-07 58.2 114 32.5
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 9.9e-07 58.2 63 46.0
THA.LOC109116233 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 9.9e-07 58.2 145 30.3
CSS0027775 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.3e-06 57.8 145 34.5
CANSAT54G2224 Cannabis sativa HOM05D000004 ORTHO05D000034 1.3e-06 57.8 169 30.2
FvH4_7g04361 Fragaria vesca HOM05D000004 ORTHO05D000224 1.3e-06 57.8 103 34.0
THA.LOC104798887 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 1.3e-06 57.8 144 27.8
CANSAT64G1493 Cannabis sativa HOM05D000004 ORTHO05D000034 1.7e-06 57.4 169 26.6
QL11p024965 Quercus lobata HOM05D000004 ORTHO05D000002 1.7e-06 57.4 69 37.7
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.7e-06 57.4 141 30.5
vmacro21906 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.7e-06 57.4 71 39.4
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.2e-06 57.0 62 43.5
Sopen01g015080 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 169 24.9
Thecc.09G221700 Theobroma cacao HOM05D010356 ORTHO05D000034 2.2e-06 57.0 190 25.3
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 2.9e-06 56.6 161 29.8
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.9e-06 56.6 61 44.3
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.9e-06 56.6 61 44.3
Oeu036411.1 Olea europaea HOM05D009054 ORTHO05D000034 2.9e-06 56.6 150 28.7
QL05p075262 Quercus lobata HOM05D000004 ORTHO05D000002 2.9e-06 56.6 168 26.8
Sabra17G0061900 Salix brachista HOM05D011124 ORTHO05D000224 2.9e-06 56.6 113 31.9
Thecc.06G081500 Theobroma cacao HOM05D010356 ORTHO05D000034 2.9e-06 56.6 177 25.4
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 3.8e-06 56.2 63 44.4
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 4.9e-06 55.8 129 32.6
Hund30460 Selenicereus undatus HOM05D008371 ORTHO05D010888 4.9e-06 55.8 152 28.3
Hund30520 Selenicereus undatus HOM05D008371 ORTHO05D010888 4.9e-06 55.8 152 28.9
Hund30521 Selenicereus undatus HOM05D008371 ORTHO05D010888 4.9e-06 55.8 152 28.9
Sopen09g023830 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-06 55.8 151 27.2
CSS0022707 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.4e-06 55.5 133 35.3
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 6.4e-06 55.5 62 41.9
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.4e-06 55.5 126 33.3
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 6.4e-06 55.5 62 41.9
FvH4_3g28463 Fragaria vesca HOM05D011494 ORTHO05D000034 6.4e-06 55.5 68 39.7
Sabra19G0052300 Salix brachista HOM05D011124 ORTHO05D000224 6.4e-06 55.5 67 40.3
Hund30141 Selenicereus undatus HOM05D008371 ORTHO05D000224 6.4e-06 55.5 152 28.3
Hund30287 Selenicereus undatus HOM05D008371 ORTHO05D000224 6.4e-06 55.5 152 28.3
Hund30387 Selenicereus undatus HOM05D008371 ORTHO05D000224 6.4e-06 55.5 152 28.3
Hund30480 Selenicereus undatus HOM05D008371 ORTHO05D000224 6.4e-06 55.5 152 28.3
Hund30481 Selenicereus undatus HOM05D008371 ORTHO05D000224 6.4e-06 55.5 152 28.3
Sopen12g027350 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-06 55.5 151 27.2
TWI77G0492 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 6.4e-06 55.5 190 27.9
CSS0004175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 8.4e-06 55.1 147 31.3
CSS0029205 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 8.4e-06 55.1 147 31.3
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 8.4e-06 55.1 113 30.1
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-06 55.1 166 28.9
CSS0042827 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 8.4e-06 55.1 147 31.3
Oeu061981.1 Olea europaea HOM05D009054 ORTHO05D000034 8.4e-06 55.1 155 28.4
Sabra15G0065900 Salix brachista HOM05D011124 ORTHO05D000224 8.4e-06 55.1 113 31.9
Hund30391 Selenicereus undatus HOM05D008371 ORTHO05D010888 8.4e-06 55.1 152 28.3
Hund30452 Selenicereus undatus HOM05D008371 ORTHO05D000224 8.4e-06 55.1 152 28.9
Sopen07g012000 Solanum pennellii HOM05D000004 ORTHO05D000002 8.4e-06 55.1 151 27.2
Thecc.02G145100 Theobroma cacao HOM05D010356 ORTHO05D000034 8.4e-06 55.1 177 26.6


User provided reference genes

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