Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12911 Davidia involucrata HOM05D000325 ORTHO05D000583 4.8e-296 1020.4 507 100.0
Hma1.2p1_0875F.1_g231360 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 3.6e-110 402.9 561 47.1
Hma1.2p1_2179F.1_g316220 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 6.2e-102 375.6 557 47.0
Dinv23676 Davidia involucrata HOM05D000325 ORTHO05D000583 1.0e-96 358.2 505 47.1
CSS0021032 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D000583 3.7e-86 323.2 554 42.4
vmacro12276 Vaccinium macrocarpon HOM05D000325 ORTHO05D000583 1.3e-83 314.7 549 42.1
QL08p038151 Quercus lobata HOM05D000325 ORTHO05D000583 6.7e-80 302.4 580 39.1
TAR574G0003 Trochodendron aralioides HOM05D000325 ORTHO05D000583 5.7e-79 299.3 646 37.5
Thecc.02G176700 Theobroma cacao HOM05D000325 ORTHO05D000583 3.2e-74 283.5 570 38.8
Cc05_g06830 Coffea canephora HOM05D000325 ORTHO05D000583 4.6e-73 279.6 554 39.5
Rhsim06G0148100 Rhododendron simsii HOM05D000325 ORTHO05D000583 7.4e-71 272.3 550 38.2
Duzib132G0093 Durio zibethinus HOM05D000325 ORTHO05D000583 4.8e-70 269.6 562 39.3
CiPaw.04G124600 Carya illinoinensis HOM05D000325 ORTHO05D000583 6.9e-69 265.8 566 37.5
Peaxi162Scf00132g00525 Petunia axillaris HOM05D000325 ORTHO05D000583 7.7e-68 262.3 540 37.8
Haze_13134 Corylus avellana HOM05D000325 ORTHO05D000583 1.3e-67 261.5 565 39.3
Actinidia09870 Actinidia chinensis HOM05D000325 ORTHO05D000583 1.4e-66 258.1 533 38.8
Actinidia11052 Actinidia chinensis HOM05D000325 ORTHO05D000583 2.5e-66 257.3 527 38.0
Nitab4.5_0000512g0220 Nicotiana tabacum HOM05D000325 ORTHO05D000583 2.1e-65 254.2 554 37.0
Lj8A114G38 Lonicera japonica HOM05D000325 ORTHO05D000583 1.4e-61 241.5 521 39.3
Potri.013G135700 Populus trichocarpa HOM05D000325 ORTHO05D000583 1.8e-61 241.1 560 35.5
Sabra13G0114900 Salix brachista HOM05D000325 ORTHO05D000583 1.6e-57 228.0 542 35.8
Ciclev10017478m.g Citrus clementina HOM05D000325 ORTHO05D000583 3.9e-56 223.4 557 35.4
TWI36G1257 Tripterygium wilfordii HOM05D000325 ORTHO05D000583 6.7e-56 222.6 565 34.0
COL.COLO4_05333 Corchorus olitorius HOM05D000325 ORTHO05D000583 2.2e-54 217.6 529 37.2
Nn1g03997 Nelumbo nucifera HOM05D000325 ORTHO05D000583 2.9e-51 207.2 633 31.8
Gohir.A12G138000 Gossypium hirsutum HOM05D000325 ORTHO05D000583 7.2e-50 202.6 536 34.5
Gohir.D12G142000 Gossypium hirsutum HOM05D000325 ORTHO05D000583 7.2e-50 202.6 532 34.6
Gorai.008G153500 Gossypium raimondii HOM05D000325 ORTHO05D000583 4.7e-49 199.9 536 34.0
CAN.G248.40 Capsicum annuum HOM05D000325 ORTHO05D000583 8.0e-49 199.1 545 33.2
Oeu048165.1 Olea europaea HOM05D000325 ORTHO05D000583 1.4e-48 198.4 537 32.6
Atru.chr6.3014 Acer truncatum HOM05D000325 ORTHO05D000583 1.8e-48 198.0 547 33.5
PGSC0003DMG400018353 Solanum tuberosum HOM05D000325 ORTHO05D000583 1.5e-47 194.9 542 31.4
Eucgr.K00960 Eucalyptus grandis HOM05D000325 ORTHO05D000583 5.7e-47 193.0 567 31.6
Nitab4.5_0010785g0020 Nicotiana tabacum HOM05D000325 ORTHO05D000583 9.7e-47 192.2 467 34.3
Sopen07g028160 Solanum pennellii HOM05D000325 ORTHO05D000583 8.2e-46 189.1 547 30.0
Prupe.3G236100 Prunus persica HOM05D000325 ORTHO05D000583 4.1e-45 186.8 536 32.8
Manes.13G148500 Manihot esculenta HOM05D000325 ORTHO05D000583 1.3e-43 181.8 523 33.1
MD17G1078700 Malus domestica HOM05D000325 ORTHO05D000583 5.0e-43 179.9 543 32.2
MD09G1088800 Malus domestica HOM05D000325 ORTHO05D000583 4.2e-42 176.8 542 32.5
Nn1g06639 Nelumbo nucifera HOM05D000325 ORTHO05D000583 4.2e-42 176.8 602 30.6
CANSAT64G2177 Cannabis sativa HOM05D000325 ORTHO05D000583 1.4e-40 171.8 546 31.9
Oeu029932.1 Olea europaea HOM05D000325 ORTHO05D000583 4.4e-39 166.8 541 32.2
PGR142G0195 Punica granatum HOM05D000325 ORTHO05D000583 5.7e-39 166.4 531 31.5
Glyma.12G203000 Glycine max HOM05D000325 ORTHO05D000583 4.8e-38 163.3 559 32.2
Medtr2g090230 Medicago truncatula HOM05D000325 ORTHO05D000583 6.3e-38 162.9 530 29.4
Glyma.13G298700 Glycine max HOM05D000325 ORTHO05D000583 3.1e-37 160.6 555 31.0
DCAR_019188 Daucus carota HOM05D000325 ORTHO05D000583 4.1e-37 160.2 536 31.7
Cpa.g.c39805 Carica papaya HOM05D000325 ORTHO05D000583 1.0e-35 155.6 423 32.9
Ca_01510_v3 Cicer arietinum L. HOM05D000325 ORTHO05D000583 3.8e-35 153.7 536 31.7
Lj3g0021902 Lotus japonicus HOM05D000325 ORTHO05D000583 6.5e-35 152.9 529 29.5
TPR.G35546 Trifolium pratense HOM05D000325 ORTHO05D000583 2.5e-34 151.0 561 30.5
RcHm_v2.0_Chr2g0162561 Rosa chinensis HOM05D000325 ORTHO05D000583 3.2e-34 150.6 531 30.9
Migut.H01064 Erythranthe guttata HOM05D000325 ORTHO05D000583 9.4e-34 149.1 528 32.0
Lj2A562G39 Lonicera japonica HOM05D000325 ORTHO05D000583 2.7e-33 147.5 518 28.8
Nitab4.5_0002473g0030 Nicotiana tabacum HOM05D000325 ORTHO05D000583 8.0e-33 146.0 513 27.7
Lalb_Chr03g0029291 Lupinus albus HOM05D000325 ORTHO05D000583 5.7e-31 139.8 524 28.2
TAR626G1525 Trochodendron aralioides HOM05D000325 ORTHO05D000583 1.7e-30 138.3 541 30.1
Aqoxy1G02583 Aquilegia oxysepala HOM05D000325 ORTHO05D000583 3.7e-30 137.1 603 29.2
Phvul.005G105300 Phaseolus vulgaris HOM05D000325 ORTHO05D000583 4.9e-30 136.7 553 29.5
Sc21g0002600 Simmondsia chinensis HOM05D000325 ORTHO05D000583 6.3e-30 136.3 533 28.7
Psat5g271600 Pisum sativum HOM05D000325 ORTHO05D000583 1.4e-29 135.2 547 27.2
Migut.C00285 Erythranthe guttata HOM05D000325 ORTHO05D000583 1.8e-29 134.8 520 30.4
VMungo1080G1319 Vigna mungo HOM05D000325 ORTHO05D000583 5.9e-28 129.8 558 30.1
Peaxi162Scf02133g00014 Petunia axillaris HOM05D000325 ORTHO05D000583 6.6e-27 126.3 517 27.7
FAN09G2287 Fragaria x ananassa HOM05D000325 ORTHO05D000583 1.2e-25 122.1 531 28.6
FvH4_6g45140 Fragaria vesca HOM05D000325 ORTHO05D000583 2.8e-25 120.9 539 28.9
FAN14G0335 Fragaria x ananassa HOM05D000325 ORTHO05D000583 2.8e-25 120.9 539 28.9
arahy.Tifrunner.gnm1.ann1.3G9GV6 Arachis hypogaea HOM05D000325 ORTHO05D000583 6.1e-25 119.8 556 28.1
AUR62009816 Chenopodium quinoa HOM05D000325 ORTHO05D000583 8.0e-25 119.4 527 28.3
FAN02G3191 Fragaria x ananassa HOM05D000325 ORTHO05D000583 2.3e-24 117.9 536 29.5
PSO478G4246 Papaver somniferum HOM05D000325 ORTHO05D000583 1.2e-23 115.5 596 25.0
FAN05G1220 Fragaria x ananassa HOM05D000325 ORTHO05D000583 2.0e-23 114.8 535 27.9
CANSAT56G4172 Cannabis sativa HOM05D000325 ORTHO05D000583 3.7e-22 110.5 520 28.5
Nitab4.5_0003022g0070 Nicotiana tabacum HOM05D000325 ORTHO05D000583 4.9e-22 110.2 511 26.8
Sopen12g005290 Solanum pennellii HOM05D000325 ORTHO05D000583 1.1e-21 109.0 229 37.1
arahy.Tifrunner.gnm1.ann1.BE7AXM Arachis hypogaea HOM05D000325 ORTHO05D000583 4.1e-21 107.1 550 27.1
AUR62038128 Chenopodium quinoa HOM05D000325 ORTHO05D000583 7.0e-21 106.3 526 27.2
CANSAT56G0192 Cannabis sativa HOM05D000325 ORTHO05D000583 1.6e-20 105.1 525 27.6
Solyc12g010700.2 Solanum lycopersicum HOM05D000325 ORTHO05D000583 8.6e-19 99.4 233 34.8
PGSC0003DMG400007812 Solanum tuberosum HOM05D000325 ORTHO05D000583 3.3e-18 97.4 229 33.2
ClCG02G001110 Citrullus lanatus HOM05D000325 ORTHO05D000583 7.3e-18 96.3 514 24.7
CAN.G486.9 Capsicum annuum HOM05D000325 ORTHO05D000583 9.5e-18 95.9 228 33.8
MELO3C013594.2 Cucumis melo HOM05D000325 ORTHO05D000583 1.0e-16 92.4 522 25.9
Aqoxy1G02584 Aquilegia oxysepala HOM05D000325 ORTHO05D000583 6.8e-16 89.7 564 25.5
CANSAT56G3098 Cannabis sativa HOM05D000325 ORTHO05D000583 1.2e-15 89.0 347 27.7
CsaV3_6G013060 Cucumis sativus L. HOM05D000325 ORTHO05D000583 2.9e-14 84.3 508 27.0
EL10Ac7g15771 Beta vulgaris HOM05D000325 ORTHO05D000583 4.9e-14 83.6 532 25.2
Sed0003371 Sechium edule HOM05D000325 ORTHO05D000583 4.9e-14 83.6 524 26.3
Cpa.g.sc700.5 Carica papaya HOM05D000325 ORTHO05D000583 8.3e-14 82.8 148 41.2
ClCG02G017510 Citrullus lanatus HOM05D000325 ORTHO05D000583 7.0e-13 79.7 166 34.9
CiPaw.09G054900 Carya illinoinensis HOM05D000325 ORTHO05D000583 1.6e-12 78.6 553 26.0
GSVIVG01030541001 Vitis vinifera HOM05D000325 ORTHO05D000583 1.6e-12 78.6 60 71.7
Lalb_Chr22g0356491 Lupinus albus HOM05D000325 ORTHO05D000583 2.7e-12 77.8 170 37.1
PSO675G4910 Papaver somniferum HOM05D000325 ORTHO05D000583 6.0e-12 76.6 282 31.6
Medtr4g038310 Medicago truncatula HOM05D000325 ORTHO05D000583 1.7e-11 75.1 504 24.4
Sed0021329 Sechium edule HOM05D000325 ORTHO05D000583 3.0e-11 74.3 506 23.5
MSTRG.12309 Avicennia marina HOM05D000325 ORTHO05D000583 5.0e-11 73.6 71 56.3
CsaV3_7G004330 Cucumis sativus L. HOM05D000325 ORTHO05D000583 5.0e-11 73.6 514 23.0
Lsat_1_v5_gn_4_65460 Lactuca sativa HOM05D000325 ORTHO05D000583 5.0e-11 73.6 325 26.8
Potri.004G038600 Populus trichocarpa HOM05D000325 ORTHO05D000583 5.0e-11 73.6 518 24.9
MELO3C018745.2 Cucumis melo HOM05D000325 ORTHO05D000583 1.1e-10 72.4 511 23.9
Atru.chr10.1955 Acer truncatum HOM05D000325 ORTHO05D000583 7.3e-10 69.7 508 25.2
Ca_05309_v3 Cicer arietinum L. HOM05D000325 ORTHO05D000583 7.3e-10 69.7 500 22.4
Rhsim06G0147900 Rhododendron simsii HOM05D066857 ORTHO05D000041 1.4e-08 65.5 91 46.2
Lsat_1_v5_gn_4_65440 Lactuca sativa HOM05D000325 ORTHO05D000583 5.2e-08 63.5 56 55.4
Prupe.5G187400 Prunus persica HOM05D000325 ORTHO05D000583 6.8e-08 63.2 58 58.6
CANSAT56G4460 Cannabis sativa HOM05D000325 ORTHO05D000583 1.2e-07 62.4 287 27.9
MSTRG.6004 Avicennia marina HOM05D000325 ORTHO05D002025 4.4e-07 60.5 89 42.7
HanXRQChr10g0294211 Helianthus annuus HOM05D000325 ORTHO05D000583 4.4e-07 60.5 57 56.1
ATR0693G077 Amborella trichopoda HOM05D000325 ORTHO05D000583 5.8e-07 60.1 614 23.1
Haze_25711 Corylus avellana HOM05D000325 ORTHO05D002025 7.5e-07 59.7 93 38.7
THA.LOC104814485 Tarenaya hassleriana HOM05D000325 ORTHO05D000583 1.7e-06 58.5 64 57.8
SGA_v2.0_scaffold307G48059 Striga asiatica HOM05D000325 ORTHO05D000583 2.2e-06 58.2 51 58.8
Cfa003260 Carpinus fangiana HOM05D000325 ORTHO05D002025 8.3e-06 56.2 93 35.5


User provided reference genes

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