Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12853 Davidia involucrata HOM05D006664 ORTHO05D009007 4.8e-179 630.9 297 100.0
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 5.9e-161 570.9 309 89.3
Dinv07586 Davidia involucrata HOM05D006664 ORTHO05D009007 9.8e-124 447.2 313 68.1
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 1.5e-111 406.8 323 59.8
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 4.3e-111 405.2 323 59.4
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 2.2e-91 339.7 328 53.0
Lj2g0004475 Lotus japonicus HOM05D008547 ORTHO05D010515 7.2e-34 148.7 325 32.6
arahy.Tifrunner.gnm1.ann1.72JBMR Arachis hypogaea HOM05D008547 ORTHO05D010515 4.8e-30 136.0 330 31.5
arahy.Tifrunner.gnm1.ann1.MSS51R Arachis hypogaea HOM05D008547 ORTHO05D010515 2.4e-29 133.7 330 31.2
CiPaw.02G099600 Carya illinoinensis HOM05D006664 ORTHO05D009007 5.4e-29 132.5 360 27.5
Actinidia18615 Actinidia chinensis HOM05D006664 ORTHO05D009007 4.5e-28 129.4 92 63.0
Rhsim08G0071800 Rhododendron simsii HOM05D006664 ORTHO05D009007 2.3e-27 127.1 282 29.8
Nn1g09439 Nelumbo nucifera HOM05D006664 ORTHO05D008819 1.0e-24 118.2 323 30.3
Actinidia38558 Actinidia chinensis HOM05D006664 ORTHO05D009007 1.4e-24 117.9 330 30.0
Actinidia23407 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.3e-24 117.1 332 29.5
Actinidia23408 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.3e-24 117.1 332 29.5
Actinidia27246 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.3e-24 117.1 332 29.5
TAR185G0005 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.3e-24 117.1 334 27.2
TAR633G2355 Trochodendron aralioides HOM05D007726 ORTHO05D008819 4.0e-24 116.3 336 26.8
TAR629G0100 Trochodendron aralioides HOM05D008437 ORTHO05D008819 6.8e-24 115.5 328 25.9
TAR633G0254 Trochodendron aralioides HOM05D007726 ORTHO05D008819 2.6e-23 113.6 336 26.5
CiPaw.05G236300 Carya illinoinensis HOM05D006664 ORTHO05D009007 5.7e-23 112.5 346 28.0
Cpa.g.sc73.88 Carica papaya HOM05D006664 ORTHO05D009007 2.8e-22 110.2 268 26.9
TAR575G0001 Trochodendron aralioides HOM05D008437 ORTHO05D008819 3.7e-22 109.8 332 25.9
Nn1g09443 Nelumbo nucifera HOM05D007726 ORTHO05D008819 3.2e-21 106.7 284 29.9
Migut.A00598 Erythranthe guttata HOM05D006664 ORTHO05D009007 9.2e-21 105.1 302 29.5
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 2.0e-20 104.0 351 27.1
COL.COLO4_15201 Corchorus olitorius HOM05D008547 ORTHO05D010515 2.7e-20 103.6 244 31.1
Aqoxy4G00159 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 5.9e-20 102.4 328 28.7
Nn1g09856 Nelumbo nucifera HOM05D006664 ORTHO05D009007 1.3e-19 101.3 258 31.0
Lj2A257T62 Lonicera japonica HOM05D006664 ORTHO05D009007 2.9e-19 100.1 350 26.6
TAR623G0051 Trochodendron aralioides HOM05D008437 ORTHO05D008819 5.0e-19 99.4 321 28.3
Migut.A00615 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.1e-18 98.2 309 26.9
Nn1g09442 Nelumbo nucifera HOM05D007726 ORTHO05D008819 1.1e-18 98.2 331 27.8
Aqoxy4G00156 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 5.6e-18 95.9 329 26.7
Aqoxy4G00777 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 9.5e-18 95.1 327 27.5
Cpa.g.sc30.96 Carica papaya HOM05D007726 ORTHO05D008819 1.6e-17 94.4 362 25.1
Migut.A00619 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.8e-17 93.6 321 26.5
Dinv24637 Davidia involucrata HOM05D007726 ORTHO05D008819 1.0e-16 91.7 363 24.2
Rhsim07G0046100 Rhododendron simsii HOM05D006664 ORTHO05D009007 1.0e-16 91.7 307 26.7
Lj7A388T90 Lonicera japonica HOM05D007726 ORTHO05D008819 3.1e-16 90.1 294 23.1
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 4.0e-16 89.7 350 24.0
MD15G1404600 Malus domestica HOM05D007726 ORTHO05D008819 6.8e-16 89.0 366 24.0
Lj7C388T5 Lonicera japonica HOM05D007726 ORTHO05D008819 5.8e-15 85.9 362 24.3
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 5.8e-15 85.9 330 23.3
Actinidia22323 Actinidia chinensis HOM05D007726 ORTHO05D008819 7.5e-15 85.5 355 25.1
Hma1.2p1_0244F.1_g101190 Hydrangea macrophylla HOM05D008437 ORTHO05D010577 7.5e-15 85.5 352 25.6
Sc23g0001620 Simmondsia chinensis HOM05D007726 ORTHO05D008819 1.3e-14 84.7 348 23.3
MSTRG.25451 Avicennia marina HOM05D007726 ORTHO05D008819 2.9e-14 83.6 372 22.3
Hund16767 Selenicereus undatus HOM05D007726 ORTHO05D008819 2.9e-14 83.6 369 23.6
Aqoxy5G04107 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 4.9e-14 82.8 264 27.3
Migut.A00599 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.1e-13 81.6 317 25.2
Psat1g047400 Pisum sativum HOM05D008547 ORTHO05D010515 1.1e-13 81.6 354 27.4
Rhsim05G0205500 Rhododendron simsii HOM05D008437 ORTHO05D010577 3.2e-13 80.1 338 24.6
Eucgr.F02895 Eucalyptus grandis HOM05D007726 ORTHO05D008819 5.4e-13 79.3 365 22.7
TAR636G0594 Trochodendron aralioides HOM05D006664 ORTHO05D008819 7.0e-13 79.0 127 37.0
vmacro12514 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 7.0e-13 79.0 352 23.9
Aqoxy5G04106 Aquilegia oxysepala HOM05D007726 ORTHO05D008819 1.2e-12 78.2 329 26.7
Sabra13G0090000 Salix brachista HOM05D007726 ORTHO05D008819 1.2e-12 78.2 296 26.0
vmacro09383 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.2e-12 78.2 354 24.0
HanXRQChr17g0565271 Helianthus annuus HOM05D007726 ORTHO05D008819 1.6e-12 77.8 368 23.4
Lj6A793G95 Lonicera japonica HOM05D006664 ORTHO05D009007 3.5e-12 76.6 95 40.0
Aqoxy5G03353 Aquilegia oxysepala HOM05D007726 ORTHO05D008819 4.6e-12 76.3 346 24.3
HanXRQChr17g0558011 Helianthus annuus HOM05D007726 ORTHO05D008819 7.8e-12 75.5 346 24.3
Medtr6g021880 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-11 75.1 351 23.1
SGA_v2.0_scaffold305G47956 Striga asiatica HOM05D006664 ORTHO05D009007 1.7e-11 74.3 327 23.9
Ciclev10020327m.g Citrus clementina HOM05D007726 ORTHO05D008819 5.0e-11 72.8 357 21.3
CAN.G1270.6 Capsicum annuum HOM05D007726 ORTHO05D008819 1.1e-10 71.6 349 24.1
Nn8g40182 Nelumbo nucifera HOM05D008437 ORTHO05D008819 1.1e-10 71.6 316 24.7
Nitab4.5_0002389g0090 Nicotiana tabacum HOM05D007726 ORTHO05D008819 1.5e-10 71.2 267 25.5
COL.COLO4_23193 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.3e-10 70.1 326 23.0
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.3e-10 70.1 269 26.4
COL.COLO4_13967 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.3e-10 69.7 325 23.7
EL10Ac1g00153 Beta vulgaris HOM05D007726 ORTHO05D008819 7.3e-10 68.9 317 23.7
Lj6A74G24 Lonicera japonica HOM05D006664 ORTHO05D009007 9.5e-10 68.6 125 36.0
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 3.6e-09 66.6 191 25.7
AUR62025056 Chenopodium quinoa HOM05D003636 ORTHO05D013299 3.6e-09 66.6 139 33.1
AUR62031665 Chenopodium quinoa HOM05D003636 ORTHO05D013299 3.6e-09 66.6 139 33.1
TAR381G1454 Trochodendron aralioides HOM05D000007 ORTHO05D000521 4.7e-09 66.2 350 26.0
Cc04_g11960 Coffea canephora HOM05D000007 ORTHO05D000017 6.2e-09 65.9 307 22.5
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 6.2e-09 65.9 191 25.1
Medtr3g030320 Medicago truncatula HOM05D000007 ORTHO05D000017 8.0e-09 65.5 290 22.8
Ca_15277_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.1e-08 65.1 257 27.6
Ca_15416_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.1e-08 65.1 257 27.6
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.1e-08 65.1 321 24.0
Nitab4.5_0003295g0110 Nicotiana tabacum HOM05D007726 ORTHO05D008819 2.3e-08 63.9 268 25.0
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 4.0e-08 63.2 191 24.6
TPR.G3820 Trifolium pratense HOM05D000007 ORTHO05D000017 5.2e-08 62.8 344 22.4
Atru.chr13.2339 Acer truncatum HOM05D007726 ORTHO05D008819 6.8e-08 62.4 175 26.9
Ca_17126_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 6.8e-08 62.4 296 27.4
Eucgr.H02939 Eucalyptus grandis HOM05D000007 ORTHO05D000017 6.8e-08 62.4 235 23.8
TAR629G0642 Trochodendron aralioides HOM05D008437 ORTHO05D008819 6.8e-08 62.4 126 32.5
AUR62043804 Chenopodium quinoa HOM05D000750 ORTHO05D013299 8.9e-08 62.0 141 32.6
AUR62044330 Chenopodium quinoa HOM05D000750 ORTHO05D013299 8.9e-08 62.0 141 32.6
Dinv41784 Davidia involucrata HOM05D007726 ORTHO05D008819 2.0e-07 60.8 193 25.4
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.0e-07 60.8 358 22.1
SGA_v2.0_scaffold69G23259 Striga asiatica HOM05D006664 ORTHO05D009007 2.0e-07 60.8 128 32.0
COL.COLO4_12256 Corchorus olitorius HOM05D000007 ORTHO05D000039 5.8e-07 59.3 365 22.7
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.8e-07 59.3 254 22.8
CiPaw.08G003800 Carya illinoinensis HOM05D007726 ORTHO05D008819 7.5e-07 58.9 188 26.6
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 7.5e-07 58.9 174 26.4
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 1.7e-06 57.8 141 28.4
Prupe.1G556700 Prunus persica HOM05D007726 ORTHO05D008819 1.7e-06 57.8 172 26.2
Migut.A00481 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.2e-06 57.4 120 30.8
Peaxi162Scf00095g00526 Petunia axillaris HOM05D000007 ORTHO05D000017 2.2e-06 57.4 307 22.5
Migut.A00602 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.9e-06 57.0 96 33.3
Atru.chr8.2145 Acer truncatum HOM05D008437 ORTHO05D010577 3.7e-06 56.6 184 27.2
Aqoxy6G01586 Aquilegia oxysepala HOM05D063209 ORTHO05D021355 4.9e-06 56.2 118 33.1
QL12p021811 Quercus lobata HOM05D000007 ORTHO05D000039 6.4e-06 55.8 140 31.4


User provided reference genes

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