Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 3.3e-223 778.1 404 100.0
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.0e-148 529.6 410 66.6
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.1e-137 493.0 407 61.9
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 2.8e-137 492.7 413 62.0
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.7e-134 483.4 411 61.6
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 6.4e-134 481.5 406 61.3
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 1.1e-133 480.7 411 61.8
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.1e-133 480.7 403 61.5
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.1e-132 476.5 409 61.9
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 6.0e-132 474.9 411 61.3
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 7.8e-132 474.6 412 60.7
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 7.8e-132 474.6 491 54.2
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 3.6e-129 465.7 407 60.2
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 6.9e-128 461.5 404 60.4
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 7.6e-127 458.0 411 59.6
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 4.9e-126 455.3 428 57.2
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.4e-125 453.8 311 72.0
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.9e-125 453.4 464 54.3
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 5.4e-125 451.8 410 57.8
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.0e-123 447.6 386 61.4
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.0e-123 447.6 386 60.9
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.3e-123 446.4 411 60.3
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 6.6e-123 444.9 412 59.2
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 8.7e-123 444.5 407 57.2
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 1.1e-122 444.1 410 57.3
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 1.5e-122 443.7 421 60.3
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 2.8e-121 439.5 410 57.1
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 6.2e-121 438.3 405 56.8
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 6.2e-121 438.3 407 57.7
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 8.1e-121 438.0 438 54.3
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.2e-119 434.1 468 58.1
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 2.0e-119 433.3 420 55.0
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 2.0e-119 433.3 413 55.9
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 5.8e-119 431.8 412 59.5
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 9.9e-119 431.0 410 56.8
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.7e-118 430.3 405 58.0
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.7e-118 430.3 411 56.0
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.9e-118 429.5 407 57.0
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 6.4e-118 428.3 447 53.9
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 6.4e-118 428.3 408 56.1
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 6.4e-118 428.3 405 54.8
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.4e-117 427.2 415 58.3
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 2.4e-117 426.4 407 56.0
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 4.2e-117 425.6 409 55.5
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.4e-117 425.2 408 56.4
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.3e-115 420.6 409 56.7
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.3e-115 420.6 406 55.2
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.8e-115 420.2 405 56.3
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 1.1e-114 417.5 406 55.7
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 1.1e-114 417.5 376 61.4
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 4.3e-114 415.6 272 73.2
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.3e-113 414.1 437 53.3
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 1.4e-112 410.6 307 66.8
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.8e-112 410.2 409 54.5
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 4.0e-112 409.1 411 54.5
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 2.0e-111 406.8 423 53.0
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 7.6e-111 404.8 489 48.9
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 4.9e-110 402.1 409 55.3
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 7.1e-109 398.3 434 52.3
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.5e-103 380.6 317 61.2
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 1.8e-99 367.1 299 59.5
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.3e-99 366.7 418 51.0
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 3.9e-99 365.9 268 63.8
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 6.7e-99 365.2 270 64.1
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.9e-98 363.6 270 62.6
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 5.7e-98 362.1 271 66.8
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 6.3e-97 358.6 308 57.1
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 4.1e-96 355.9 305 57.4
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 9.0e-96 354.8 418 48.1
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 2.0e-95 353.6 418 48.1
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.4e-95 352.8 414 47.3
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.4e-95 352.8 414 47.3
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 5.9e-95 352.1 270 61.1
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 7.6e-95 351.7 306 56.5
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.0e-94 351.3 418 47.6
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.7e-94 350.5 270 62.2
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 2.2e-94 350.1 321 58.3
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 3.8e-94 349.4 305 56.4
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 8.5e-94 348.2 419 47.0
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 5.5e-93 345.5 461 45.1
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 7.9e-92 341.7 312 59.6
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 3.0e-91 339.7 404 47.8
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.1e-90 337.8 432 43.3
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.5e-82 310.8 321 53.3
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 3.3e-82 309.7 273 57.1
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.7e-81 307.4 193 75.6
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 2.8e-81 306.6 420 46.0
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.7e-78 297.4 411 43.3
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 5.5e-77 292.4 287 59.9
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 6.1e-76 288.9 356 54.2
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 1.5e-74 284.3 276 56.2
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 4.4e-74 282.7 197 70.6
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.6e-71 273.5 298 47.3
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 9.4e-69 265.0 380 46.1
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.2e-66 258.1 406 41.1
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.1e-64 251.5 273 49.8
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.8e-57 226.1 212 51.9
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 8.0e-52 208.8 172 57.6
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.2e-50 204.9 245 50.2
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 5.7e-50 202.6 187 54.0
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.7e-49 201.1 113 83.2
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 3.8e-46 189.9 308 39.0
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.2e-44 184.9 199 52.3
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 3.0e-43 180.3 270 39.3
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.5e-34 151.4 112 67.9
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 4.9e-33 146.4 87 73.6
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 3.2e-32 143.7 84 76.2
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 2.1e-28 131.0 112 60.7
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.4e-27 128.3 233 41.6
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 2.0e-26 124.4 281 31.3
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 7.3e-21 105.9 313 30.7
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 7.3e-21 105.9 155 39.4
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.2e-20 105.1 168 40.5
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 6.2e-20 102.8 84 54.8
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.0e-18 97.8 154 42.2
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 6.0e-15 86.3 58 70.7
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 1.8e-11 74.7 47 72.3
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 3.5e-07 60.5 185 28.1


User provided reference genes

Program Settings