Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12704 Davidia involucrata HOM05D000034 ORTHO05D000277 3.0e-111 405.2 207 100.0
Dinv07862 Davidia involucrata HOM05D000034 ORTHO05D000277 1.3e-69 266.9 202 75.7
Dinv14448 Davidia involucrata HOM05D000780 ORTHO05D000277 3.1e-68 262.3 196 72.4
Dinv19761 Davidia involucrata HOM05D000034 ORTHO05D000277 2.2e-66 256.1 278 52.9
Hma1.2p1_0170F.1_g074960 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 1.9e-65 253.1 302 48.7
Hma1.2p1_0744F.1_g211850 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 5.5e-65 251.5 301 48.5
Dinv40251 Davidia involucrata HOM05D000034 ORTHO05D000277 9.4e-65 250.8 265 54.0
Hma1.2p1_1277F.1_g272250 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 1.8e-63 246.5 302 47.4
Hma1.2p1_2091F.1_g313860 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 1.8e-63 246.5 303 48.2
Hma1.2p1_1104F.1_g257520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-61 240.4 302 47.0
Dinv07088 Davidia involucrata HOM05D000034 ORTHO05D000277 3.8e-58 228.8 275 48.7
Hma1.2p1_0386F.1_g141750 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 2.3e-55 219.5 284 45.1
Dinv24233 Davidia involucrata HOM05D000034 ORTHO05D000277 1.2e-51 207.2 134 77.6
Hma1.2p1_0529F.1_g173280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-51 206.8 140 76.4
Hma1.2p1_1398F.1_g280820 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 2.9e-50 202.6 140 75.0
Hma1.2p1_2109F.1_g314220 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 5.0e-50 201.8 140 74.3
Dinv07787 Davidia involucrata HOM05D000034 ORTHO05D000277 4.7e-48 195.3 142 72.5
Dinv04284 Davidia involucrata HOM05D000034 ORTHO05D000277 8.0e-48 194.5 230 50.4
Dinv38790 Davidia involucrata HOM05D000034 ORTHO05D000277 8.0e-48 194.5 265 46.0
Hma1.2p1_2091F.1_g313856 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 4.4e-46 188.7 253 49.8
Dinv32704 Davidia involucrata HOM05D000034 ORTHO05D000277 2.4e-44 183.0 208 51.9
Dinv06479 Davidia involucrata HOM05D000034 ORTHO05D000277 3.1e-44 182.6 142 67.6
Dinv10900 Davidia involucrata HOM05D000034 ORTHO05D000277 9.2e-44 181.0 142 66.9
Hma1.2p1_0546F.1_g176280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.2e-32 144.1 89 79.8
Hma1.2p1_1408F.1_g281560 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-31 141.0 88 79.5
Dinv25411 Davidia involucrata HOM05D000034 ORTHO05D000277 5.8e-30 135.2 81 86.4
Dinv07784 Davidia involucrata HOM05D000034 ORTHO05D000277 4.9e-29 132.1 166 46.4
Hma1.2p1_1009F.1_g247290 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 4.1e-28 129.0 190 42.6
ECA248G3867 Erigeron canadensis HOM05D000034 ORTHO05D001663 3.3e-25 119.4 212 35.4
Hma1.2p1_0317F.1_g123710 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-24 116.3 216 36.1
Hma1.2p1_0136F.1_g062010 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 6.2e-24 115.2 157 43.3
Rhsim01G0279200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.1e-23 114.4 138 46.4
Rhsim03G0059900 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.1e-23 112.8 138 45.7
Hma1.2p1_0354F.1_g133500 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 8.3e-21 104.8 61 82.0
HanXRQChr10g0300111 Helianthus annuus HOM05D000034 ORTHO05D000277 1.3e-18 97.4 300 26.7
vmacro19514 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 1.7e-18 97.1 95 49.5
QL01p014514 Quercus lobata HOM05D000034 ORTHO05D000277 4.3e-17 92.4 137 40.1
ECA233G0748 Erigeron canadensis HOM05D000163 ORTHO05D000219 2.1e-16 90.1 220 30.5
ECA232G3080 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.8e-16 89.7 215 29.8
HanXRQChr09g0256181 Helianthus annuus HOM05D000034 ORTHO05D000277 1.8e-15 87.0 299 24.7
Atru.chr6.616 Acer truncatum HOM05D000034 ORTHO05D000037 3.1e-15 86.3 310 23.2
Dinv26538 Davidia involucrata HOM05D000034 ORTHO05D000277 4.0e-15 85.9 219 31.1
Atru.chr4.1088 Acer truncatum HOM05D000034 ORTHO05D000037 6.8e-15 85.1 310 23.5
Dinv19449 Davidia involucrata HOM05D000034 ORTHO05D000277 8.9e-15 84.7 57 70.2
Migut.O00810 Erythranthe guttata HOM05D000034 ORTHO05D000277 2.0e-14 83.6 300 24.7
Hma1.2p1_0026F.1_g016610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.6e-14 83.2 153 34.0
Hma1.2p1_1761F.1_g301340 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.6e-14 83.2 246 29.3
Rhsim05G0015700 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.6e-14 83.2 111 43.2
Hma1.2p1_0890F.1_g233020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.9e-14 81.3 133 34.6
Hma1.2p1_0189F.1_g082820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-13 80.9 150 35.3
Lsat_1_v5_gn_3_6061 Lactuca sativa HOM05D000034 ORTHO05D000277 2.9e-13 79.7 63 60.3
vmacro18938 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.9e-13 79.7 118 43.2
ECA240G3829 Erigeron canadensis HOM05D000034 ORTHO05D000037 3.8e-13 79.3 64 59.4
Lsat_1_v5_gn_8_84821 Lactuca sativa HOM05D000034 ORTHO05D000277 1.1e-12 77.8 63 60.3
Hund12353 Selenicereus undatus HOM05D000034 ORTHO05D000277 1.1e-12 77.8 91 45.1
SGA_v2.0_scaffold122G33229 Striga asiatica HOM05D000034 ORTHO05D000277 1.4e-12 77.4 285 23.5
CANSAT80G2650 Cannabis sativa HOM05D000800 ORTHO05D000658 4.2e-12 75.9 153 28.1
DCAR_017700 Daucus carota HOM05D000034 ORTHO05D000277 5.4e-12 75.5 291 23.4
Hma1.2p1_0317F.1_g123700 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.1e-12 75.1 46 76.1
ECA232G0859 Erigeron canadensis HOM05D005071 ORTHO05D006069 9.2e-12 74.7 63 55.6
Lsat_1_v5_gn_9_11180 Lactuca sativa HOM05D000034 ORTHO05D000277 9.2e-12 74.7 277 23.5
Migut.L00416 Erythranthe guttata HOM05D000034 ORTHO05D000277 1.2e-11 74.3 315 22.2
Hma1.2p1_1264F.1_g271290 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.1e-11 73.6 205 28.8
CANSAT35G1930 Cannabis sativa HOM05D000034 ORTHO05D000037 4.6e-11 72.4 130 30.0
SGA_v2.0_scaffold4699G54522 Striga asiatica HOM05D000034 ORTHO05D000277 6.0e-11 72.0 62 51.6
HanXRQChr06g0168961 Helianthus annuus HOM05D000034 ORTHO05D000037 7.8e-11 71.6 290 23.1
Lsat_1_v5_gn_4_39681 Lactuca sativa HOM05D000034 ORTHO05D000277 7.8e-11 71.6 62 53.2
Migut.N00931 Erythranthe guttata HOM05D000034 ORTHO05D000277 5.1e-10 68.9 62 46.8
ECA240G3965 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.6e-10 68.6 62 51.6
Hma1.2p1_0442F.1_g153940 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 6.6e-10 68.6 287 24.7
CANSAT54G0624 Cannabis sativa HOM05D000034 ORTHO05D000037 1.1e-09 67.8 127 28.3
HanXRQChr01g0013481 Helianthus annuus HOM05D000034 ORTHO05D000277 1.1e-09 67.8 133 31.6
Hma1.2p1_0746F.1_g212360 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.5e-09 67.4 155 30.3
Hma1.2p1_0846F.1_g227800 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.5e-09 67.4 155 30.3
SGA_v2.0_scaffold17G08100 Striga asiatica HOM05D000034 ORTHO05D000277 1.9e-09 67.0 300 22.0
SGA_v2.0_scaffold283G47003 Striga asiatica HOM05D000034 ORTHO05D000277 1.9e-09 67.0 300 22.0
GSVIVG01022336001 Vitis vinifera HOM05D000034 ORTHO05D000277 2.5e-09 66.6 289 22.1
Hma1.2p1_0896F.1_g233910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-09 66.2 267 25.8
Hma1.2p1_1276F.1_g272080 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-09 66.2 223 26.9
Actinidia34654 Actinidia chinensis HOM05D000034 ORTHO05D000277 9.6e-09 64.7 67 50.7
ECA234G1376 Erigeron canadensis HOM05D000034 ORTHO05D000277 1.2e-08 64.3 55 50.9
HanXRQChr13g0408861 Helianthus annuus HOM05D000034 ORTHO05D000277 1.2e-08 64.3 139 31.7
Hund01229 Selenicereus undatus HOM05D000034 ORTHO05D000037 1.2e-08 64.3 58 50.0
SGA_v2.0_scaffold177G39459 Striga asiatica HOM05D000034 ORTHO05D000277 1.2e-08 64.3 309 22.7
ECA236G4356 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.6e-08 63.9 205 26.8
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-08 63.9 155 30.3
ECA240G4698 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.1e-08 63.5 285 22.1
Hma1.2p1_0165F.1_g073390 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-08 63.2 155 29.7
Hma1.2p1_0573F.1_g181360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-08 63.2 100 33.0
ECA236G1520 Erigeron canadensis HOM05D000062 ORTHO05D000043 3.6e-08 62.8 67 46.3
vmacro16065 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.7e-08 62.4 222 26.1
ECA234G4277 Erigeron canadensis HOM05D000034 ORTHO05D000277 6.2e-08 62.0 68 42.6
Atru.chr1.1500 Acer truncatum HOM05D000034 ORTHO05D000037 1.1e-07 61.2 280 22.5
Atru.chr12.1422 Acer truncatum HOM05D000034 ORTHO05D000037 1.1e-07 61.2 61 42.6
DCAR_007051 Daucus carota HOM05D000034 ORTHO05D000277 1.1e-07 61.2 164 31.7
Lsat_1_v5_gn_6_30960 Lactuca sativa HOM05D000034 ORTHO05D000277 1.4e-07 60.8 124 29.0
CSS0033959 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.8e-07 60.5 46 54.3
Hma1.2p1_0276F.1_g111440 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-07 60.5 175 29.1
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-07 60.5 152 28.9
Zm00001eb137320 Zea mays HOM05D000034 ORTHO05D000277 2.4e-07 60.1 66 40.9
FAN12G2533 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.1e-07 59.7 64 51.6
Lsat_1_v5_gn_9_14541 Lactuca sativa HOM05D000034 ORTHO05D000277 3.1e-07 59.7 149 31.5
CSS0046359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 4.0e-07 59.3 141 30.5
ECA236G3356 Erigeron canadensis HOM05D001106 ORTHO05D000910 4.0e-07 59.3 62 50.0
ECA240G4546 Erigeron canadensis HOM05D000034 ORTHO05D000277 4.0e-07 59.3 62 50.0
ECA246G4287 Erigeron canadensis HOM05D000034 ORTHO05D000277 4.0e-07 59.3 62 50.0
Hma1.2p1_0096F.1_g047690 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.0e-07 59.3 258 22.1
ECA246G0281 Erigeron canadensis HOM05D000034 ORTHO05D000277 5.3e-07 58.9 62 50.0
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.3e-07 58.9 129 28.7
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.3e-07 58.9 129 28.7
Zm00001eb190420 Zea mays HOM05D000034 ORTHO05D000277 5.3e-07 58.9 66 40.9
ECA233G2230 Erigeron canadensis HOM05D000034 ORTHO05D000037 6.9e-07 58.5 50 52.0
FvH4_1g08720 Fragaria vesca HOM05D000034 ORTHO05D000037 6.9e-07 58.5 61 45.9
FvH4_5g36380 Fragaria vesca HOM05D008011 ORTHO05D000277 6.9e-07 58.5 63 42.9
ECA247G0616 Erigeron canadensis HOM05D000034 ORTHO05D000277 9.0e-07 58.2 55 47.3
Lsat_1_v5_gn_5_111160 Lactuca sativa HOM05D000034 ORTHO05D000277 9.0e-07 58.2 123 26.8
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 1.2e-06 57.8 289 22.5
FAN18G0511 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.2e-06 57.8 61 42.6
Actinidia12237 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.5e-06 57.4 70 47.1
ECA236G4617 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.5e-06 57.4 62 50.0
FAN01G0758 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.5e-06 57.4 60 45.0
FAN07G2407 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.5e-06 57.4 173 26.6
Hund20273 Selenicereus undatus HOM05D000034 ORTHO05D000277 1.5e-06 57.4 56 46.4
CSS0011764 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.0e-06 57.0 145 29.7
CANSAT01G2074 Cannabis sativa HOM05D000034 ORTHO05D000277 2.0e-06 57.0 84 34.5
ECA246G4049 Erigeron canadensis HOM05D000034 ORTHO05D000277 2.0e-06 57.0 62 48.4
Hma1.2p1_2726F.1_g327610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-06 57.0 235 24.3
MD06G1073100 Malus domestica HOM05D008011 ORTHO05D000277 2.0e-06 57.0 60 46.7
SGA_v2.0_scaffold84G26487 Striga asiatica HOM05D000034 ORTHO05D000277 2.0e-06 57.0 280 25.0
CSS0048757 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.6e-06 56.6 235 24.3
ECA247G1870 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.6e-06 56.6 71 42.3
FAN14G5761 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.6e-06 56.6 61 42.6
Hund10142 Selenicereus undatus HOM05D000034 ORTHO05D000277 2.6e-06 56.6 44 59.1
Zm00001eb270330 Zea mays HOM05D000034 ORTHO05D000277 2.6e-06 56.6 66 39.4
ECA240G2922 Erigeron canadensis HOM05D000034 ORTHO05D000277 3.4e-06 56.2 169 29.0
TWI34G1435 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.4e-06 56.2 102 30.4
Zm00001eb055610 Zea mays HOM05D000034 ORTHO05D000277 3.4e-06 56.2 66 39.4
Actinidia35710 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.4e-06 55.8 171 26.9
arahy.Tifrunner.gnm1.ann1.5U3795 Arachis hypogaea HOM05D001651 ORTHO05D000277 5.8e-06 55.5 191 28.8
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.8e-06 55.5 134 29.9
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.8e-06 55.5 255 20.8
Lsat_1_v5_gn_1_64540 Lactuca sativa HOM05D000034 ORTHO05D000277 5.8e-06 55.5 53 49.1
Lsat_1_v5_gn_7_34221 Lactuca sativa HOM05D000034 ORTHO05D000277 5.8e-06 55.5 50 50.0
RhsimUnG0131900 Rhododendron simsii HOM05D000034 ORTHO05D000277 5.8e-06 55.5 235 24.3
RcHm_v2.0_Chr7g0199171 Rosa chinensis HOM05D008011 ORTHO05D000277 5.8e-06 55.5 63 39.7
Atru.chr7.989 Acer truncatum HOM05D000034 ORTHO05D000037 7.6e-06 55.1 206 26.7
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 7.6e-06 55.1 55 45.5
ECA238G2001 Erigeron canadensis HOM05D025250 ORTHO05D000277 7.6e-06 55.1 99 27.3
FvH4_6g20010 Fragaria vesca HOM05D008011 ORTHO05D000277 7.6e-06 55.1 61 41.0
Hma1.2p1_1929F.1_g307890 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.6e-06 55.1 220 21.8
Hma1.2p1_2228F.1_g317520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.6e-06 55.1 77 37.7
Rhsim13G0189100 Rhododendron simsii HOM05D009692 ORTHO05D011920 7.6e-06 55.1 103 35.0
ECA234G1537 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-06 54.7 50 50.0
ECA246G4240 Erigeron canadensis HOM05D000034 ORTHO05D000037 9.9e-06 54.7 50 48.0
FvH4_5g01520 Fragaria vesca HOM05D008011 ORTHO05D000277 9.9e-06 54.7 63 39.7
FAN18G3785 Fragaria x ananassa HOM05D008011 ORTHO05D000277 9.9e-06 54.7 63 39.7
Lsat_1_v5_gn_5_173001 Lactuca sativa HOM05D000034 ORTHO05D000277 9.9e-06 54.7 155 27.1


User provided reference genes

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