Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12652 Davidia involucrata HOM05D000015 ORTHO05D026254 3.1e-96 355.1 181 100.0
Dinv39294 Davidia involucrata HOM05D000015 ORTHO05D000734 3.4e-42 175.6 99 88.9
Dinv39297 Davidia involucrata HOM05D000015 ORTHO05D000734 3.4e-42 175.6 99 88.9
Dinv39292 Davidia involucrata HOM05D000015 ORTHO05D000734 1.9e-37 159.8 97 81.4
Dinv39296 Davidia involucrata HOM05D000015 ORTHO05D000734 5.6e-37 158.3 97 81.4
Dinv39298 Davidia involucrata HOM05D000015 ORTHO05D000734 1.4e-35 153.7 97 79.4
TAR381G1512 Trochodendron aralioides HOM05D000015 ORTHO05D022729 5.8e-26 121.7 96 64.6
Atru.chr1.3526 Acer truncatum HOM05D000015 ORTHO05D000734 2.2e-25 119.8 99 60.6
Atru.chr1.3692 Acer truncatum HOM05D000015 ORTHO05D000734 1.4e-24 117.1 99 56.6
GSVIVG01009471001 Vitis vinifera HOM05D000015 ORTHO05D000734 1.9e-24 116.7 95 62.1
Actinidia38063 Actinidia chinensis HOM05D000015 ORTHO05D000734 2.4e-24 116.3 101 59.4
Thecc.08G004100 Theobroma cacao HOM05D000015 ORTHO05D000734 7.0e-24 114.8 94 58.5
Hma1.2p1_0360F.1_g135680 Hydrangea macrophylla HOM05D000015 ORTHO05D000734 1.2e-23 114.0 101 55.4
Atru.chr13.719 Acer truncatum HOM05D000015 ORTHO05D026254 6.0e-23 111.7 99 57.6
Eucgr.G01657 Eucalyptus grandis HOM05D000015 ORTHO05D000734 5.1e-22 108.6 95 54.7
FAN15G3543 Fragaria x ananassa HOM05D000015 ORTHO05D000734 1.1e-21 107.5 97 50.5
FAN20G2695 Fragaria x ananassa HOM05D000015 ORTHO05D000734 1.1e-21 107.5 97 50.5
Ciclev10003898m.g Citrus clementina HOM05D000015 ORTHO05D000734 4.3e-21 105.5 97 52.6
FvH4_2g34120 Fragaria vesca HOM05D000015 ORTHO05D000734 9.5e-21 104.4 97 49.5
FAN24G0434 Fragaria x ananassa HOM05D000015 ORTHO05D000734 9.5e-21 104.4 97 49.5
Manes.18G039300 Manihot esculenta HOM05D000015 ORTHO05D000734 1.6e-20 103.6 96 50.0
COL.COLO4_26543 Corchorus olitorius HOM05D000015 ORTHO05D000734 2.8e-20 102.8 94 53.2
Potri.014G026600 Populus trichocarpa HOM05D000015 ORTHO05D000734 2.8e-20 102.8 97 51.5
RcHm_v2.0_Chr6g0308221 Rosa chinensis HOM05D000015 ORTHO05D000734 3.6e-20 102.4 97 49.5
MD15G1080300 Malus domestica HOM05D000015 ORTHO05D000734 4.7e-20 102.1 97 50.5
QL11p046880 Quercus lobata HOM05D000015 ORTHO05D000734 6.2e-20 101.7 98 54.1
Prupe.1G433100 Prunus persica HOM05D000015 ORTHO05D000734 8.1e-20 101.3 96 46.9
Eucgr.L02407 Eucalyptus grandis HOM05D000015 ORTHO05D000734 1.4e-19 100.5 88 53.4
ECA247G2765 Erigeron canadensis HOM05D000015 ORTHO05D000734 3.1e-19 99.4 95 52.6
FvH4_2g34150 Fragaria vesca HOM05D000015 ORTHO05D000734 4.0e-19 99.0 95 51.6
FvH4_2g34211 Fragaria vesca HOM05D000015 ORTHO05D000734 1.5e-18 97.1 95 50.5
FAN24G3293 Fragaria x ananassa HOM05D000015 ORTHO05D000734 1.5e-18 97.1 95 50.5
FAN27G1135 Fragaria x ananassa HOM05D000015 ORTHO05D000734 1.5e-18 97.1 95 50.5
Lj4P770T42 Lonicera japonica HOM05D000015 ORTHO05D000734 2.6e-18 96.3 98 53.1
QL04p018749 Quercus lobata HOM05D000015 ORTHO05D000734 4.4e-18 95.5 98 48.0
TWI36G1100 Tripterygium wilfordii HOM05D000015 ORTHO05D000734 7.5e-18 94.7 94 51.1
Prupe.1G433200 Prunus persica HOM05D000015 ORTHO05D000734 1.7e-17 93.6 97 43.3
RcHm_v2.0_Chr6g0308201 Rosa chinensis HOM05D000015 ORTHO05D000734 2.9e-17 92.8 98 45.9
FAN24G2375 Fragaria x ananassa HOM05D000015 ORTHO05D000734 4.9e-17 92.0 100 47.0
FvH4_2g34130 Fragaria vesca HOM05D000015 ORTHO05D000734 6.4e-17 91.7 100 47.0
TWI36G0190 Tripterygium wilfordii HOM05D000015 ORTHO05D000734 6.4e-17 91.7 94 48.9
FAN03G0912 Fragaria x ananassa HOM05D000015 ORTHO05D000734 3.2e-16 89.4 96 47.9
RcHm_v2.0_Chr6g0308211 Rosa chinensis HOM05D000015 ORTHO05D000734 4.1e-16 89.0 100 45.0
ECA247G1194 Erigeron canadensis HOM05D000015 ORTHO05D000734 2.1e-15 86.7 95 46.3
HanXRQChr02g0038171 Helianthus annuus HOM05D000015 ORTHO05D000734 3.5e-15 85.9 93 46.2
Atru.chr1.3694 Acer truncatum HOM05D000015 ORTHO05D000734 1.0e-14 84.3 59 67.8
Lsat_1_v5_gn_1_21620 Lactuca sativa HOM05D000015 ORTHO05D000734 1.7e-14 83.6 94 45.7
QL04p018792 Quercus lobata HOM05D000015 ORTHO05D000734 1.7e-14 83.6 101 49.5
MD05G1275700 Malus domestica HOM05D000015 ORTHO05D000734 4.3e-13 79.0 95 45.3
COL.COLO4_26541 Corchorus olitorius HOM05D000015 ORTHO05D000734 1.2e-12 77.4 99 45.5
Eucgr.F02324 Eucalyptus grandis HOM05D000015 ORTHO05D000734 4.7e-12 75.5 95 43.2
Rhsim05G0083300 Rhododendron simsii HOM05D000015 ORTHO05D000734 6.2e-12 75.1 69 50.7
Duzib093G1180 Durio zibethinus HOM05D000015 ORTHO05D000734 1.8e-11 73.6 116 44.8
Manes.05G175400 Manihot esculenta HOM05D000015 ORTHO05D000734 3.1e-11 72.8 94 41.5
Gohir.A05G203800 Gossypium hirsutum HOM05D000015 ORTHO05D000734 4.0e-11 72.4 107 41.1
Thecc.08G004200 Theobroma cacao HOM05D000015 ORTHO05D000734 5.2e-11 72.0 115 40.9
Gohir.D05G207000 Gossypium hirsutum HOM05D000015 ORTHO05D000734 1.5e-10 70.5 107 40.2
Gorai.009G213600 Gossypium raimondii HOM05D000015 ORTHO05D000734 1.5e-10 70.5 107 40.2
Gorai.008G024400 Gossypium raimondii HOM05D000015 ORTHO05D000734 2.6e-10 69.7 97 42.3
Dinv39295 Davidia involucrata HOM05D000015 ORTHO05D000734 5.8e-10 68.6 37 89.2
MD15G1080100 Malus domestica HOM05D000015 ORTHO05D000734 9.9e-10 67.8 96 38.5
TAR376G0919 Trochodendron aralioides HOM05D000015 ORTHO05D000734 9.9e-10 67.8 98 35.7
Gorai.N019600 Gossypium raimondii HOM05D000015 ORTHO05D000734 2.9e-09 66.2 97 40.2
Gohir.D12G023925 Gossypium hirsutum HOM05D000015 ORTHO05D000734 6.4e-09 65.1 97 40.2
Ciclev10027850m.g Citrus clementina HOM05D000015 ORTHO05D000734 8.4e-09 64.7 98 37.8
Actinidia17875 Actinidia chinensis HOM05D000015 ORTHO05D000734 1.1e-08 64.3 97 33.0
Eucgr.G01419 Eucalyptus grandis HOM05D000015 ORTHO05D000734 1.1e-08 64.3 98 39.8
GSVIVG01031725001 Vitis vinifera HOM05D000015 ORTHO05D000734 1.1e-08 64.3 96 36.5
Cpa.g.c33779.2 Carica papaya HOM05D000015 ORTHO05D000734 1.4e-08 63.9 100 38.0
Ciclev10030049m.g Citrus clementina HOM05D000015 ORTHO05D000734 3.2e-08 62.8 98 36.7
Gorai.001G060600 Gossypium raimondii HOM05D000015 ORTHO05D000734 5.4e-08 62.0 115 39.1
TWI36G0627 Tripterygium wilfordii HOM05D000015 ORTHO05D000734 5.4e-08 62.0 95 37.9
Eucgr.G01430 Eucalyptus grandis HOM05D000015 ORTHO05D000734 7.1e-08 61.6 98 36.7
Gohir.A07G052700 Gossypium hirsutum HOM05D000015 ORTHO05D000734 7.1e-08 61.6 114 38.6
Gohir.D07G057100 Gossypium hirsutum HOM05D000015 ORTHO05D000734 7.1e-08 61.6 114 38.6
Gohir.A12G023300 Gossypium hirsutum HOM05D000015 ORTHO05D000734 9.3e-08 61.2 98 37.8
Eucgr.G01429 Eucalyptus grandis HOM05D000015 ORTHO05D000734 1.2e-07 60.8 98 38.8
Atru.chr5.2714 Acer truncatum HOM05D000015 ORTHO05D000734 1.6e-07 60.5 98 38.8
Ciclev10000411m.g Citrus clementina HOM05D000015 ORTHO05D000734 1.6e-07 60.5 96 35.4
COL.COLO4_32640 Corchorus olitorius HOM05D000015 ORTHO05D000734 1.6e-07 60.5 97 41.2
Eucgr.G01423 Eucalyptus grandis HOM05D000015 ORTHO05D000734 1.6e-07 60.5 98 38.8
Eucgr.G01420 Eucalyptus grandis HOM05D000015 ORTHO05D000734 4.6e-07 58.9 98 35.7
Eucgr.G01428 Eucalyptus grandis HOM05D000015 ORTHO05D000734 4.6e-07 58.9 98 35.7
Atru.chr1.3687 Acer truncatum HOM05D000015 ORTHO05D026254 6.0e-07 58.5 59 50.8
GSVIVG01031723001 Vitis vinifera HOM05D000015 ORTHO05D000734 6.0e-07 58.5 95 35.8
ATR0584G269 Amborella trichopoda HOM05D000015 ORTHO05D000734 1.0e-06 57.8 96 35.4
TWI77G0707 Tripterygium wilfordii HOM05D000015 ORTHO05D000734 1.0e-06 57.8 98 32.7
GSVIVG01031724001 Vitis vinifera HOM05D000015 ORTHO05D000734 1.0e-06 57.8 97 35.1
Eucgr.G01432 Eucalyptus grandis HOM05D000015 ORTHO05D000734 1.3e-06 57.4 98 36.7
TAR376G0503 Trochodendron aralioides HOM05D000015 ORTHO05D000734 1.3e-06 57.4 99 32.3
PGR042G3977 Punica granatum HOM05D000015 ORTHO05D000734 1.7e-06 57.0 95 37.9
TWI36G0165 Tripterygium wilfordii HOM05D000015 ORTHO05D000734 3.0e-06 56.2 94 33.0
Psat4g217960 Pisum sativum HOM05D000015 ORTHO05D000734 3.9e-06 55.8 98 27.6
Psat0s4182g0040 Pisum sativum HOM05D000015 ORTHO05D000734 8.7e-06 54.7 96 32.3


User provided reference genes

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